CX671384
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX671384 vs. ExPASy Swiss-Prot
Match: ATX3H_ARATH (Ataxin-3 homolog OS=Arabidopsis thaliana GN=At3g54130 PE=2 SV=1) HSP 1 Score: 258.84 bits (660), Expect = 2.485e-68 Identity = 127/171 (74.27%), Postives = 142/171 (83.04%), Query Frame = -1 Query: 306 QKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKECPI-SSSDSSNGYGQWLSPEDAERITKSCNT----REGPKRIKLTQQHSDPFLSAEEADRLLEMEDEDLKAAIAASLLD 803 QKALEVWDLQVIPLNCP AEPAQIDPELE+AFICHLHDHWFCIRKVNGEWYNFDSL AAP+HLSKFYLSA+LDSLKG GWSIFIV+GNFP+ECP+ SSS++SN +GQWLSPEDAERI K+ ++ R + QQ + LS EE EMED+DLKAAIAASLLD Sbjct: 88 QKALEVWDLQVIPLNCPDAEPAQIDPELESAFICHLHDHWFCIRKVNGEWYNFDSLLAAPQHLSKFYLSAFLDSLKGAGWSIFIVKGNFPQECPMSSSSEASNSFGQWLSPEDAERIRKNTSSGSSARNKRSNDNVNQQRRNQALSREEVQAFSEMEDDDLKAAIAASLLD 258
BLAST of CX671384 vs. ExPASy Swiss-Prot
Match: ATX3_ORYSJ (Putative ataxin-3 homolog OS=Oryza sativa subsp. japonica GN=Os01g0851400 PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 3.366e-57 Identity = 108/173 (62.43%), Postives = 131/173 (75.72%), Query Frame = -1 Query: 306 QKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKECPISSSDSSNGYGQWLSPEDAERITKSCNTREGPKRIKLTQQHSDPFLSAEEADRLLEM-------EDEDLKAAIAASLLD 803 QKALEVWDLQVIPL+ P DPELE AFICHL DHWFCIRKVNGEWYNF+SLY APEHLSKFYLSA++D+LKG GWSIF VRGNFPKECP+ +++ SNG+GQWL+P+DA RIT SCN +++ Q + L A++++ + EM E+ DL AAIAASL+D Sbjct: 94 QKALEVWDLQVIPLDSPDVGSCLFDPELETAFICHLQDHWFCIRKVNGEWYNFNSLYPAPEHLSKFYLSAFIDTLKGSGWSIFAVRGNFPKECPM-ATEGSNGFGQWLTPDDARRITSSCN------QVQTPTQQAGVSLVADQSEEMSEMDMIAAQQEEADLNAAIAASLMD 259
BLAST of CX671384 vs. ExPASy Swiss-Prot
Match: ATX3_HUMAN (Ataxin-3 OS=Homo sapiens GN=ATXN3 PE=1 SV=3) HSP 1 Score: 91.6633 bits (226), Expect = 5.253e-18 Identity = 53/164 (32.32%), Postives = 90/164 (54.88%), Query Frame = -1 Query: 315 ALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKECPISSSDSSNGYGQWLSPEDAERITKSCNTREGPKRIKLTQQHS---DPFLSAEEADRLLEMEDEDLKAAIAAS 797 AL+VW L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ G+SIF+V+G+ P +C Q L +++ + E ++K + H + L A + +L+ ++EDL+ A+A S Sbjct: 83 ALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLP-DCEAD---------QLLQMIRVQQMHRPKLIGEELAQLKEQRVHKTDLERVLEANDGSGMLDEDEEDLQRALALS 236
BLAST of CX671384 vs. ExPASy Swiss-Prot
Match: ATX3_CHICK (Ataxin-3 OS=Gallus gallus GN=ATXN3 PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.808e-17 Identity = 50/178 (28.09%), Postives = 90/178 (50.56%), Query Frame = -1 Query: 312 ALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFP----------------KECPISSSDSSNGYGQWLSPEDAERITKSCNTREGPKRIKLTQQHSDPFLSAEEADRLLEMEDEDLKAAIAASL 797 AL+VW L++I N P + IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ G+SIF+V+G+ P + + +++ Q L D ++ + + +G + +++ L+ + +E E+ DL+ AI S+ Sbjct: 83 ALKVWGLELILFNSPEYQRLGIDPINEKSFICNYKEHWFTVRKLGKQWFNLNSLLMGPELISDTYLALFLAQLQQEGYSIFVVKGDLPDCEADQLLQMIRVQQVQRPKLIGEETAQSRDQRLPRSDVDQAIEVSHPFDGTGMLDEDEENFQRALALSRQEIDMEDEEADLRRAIQLSM 260
BLAST of CX671384 vs. ExPASy Swiss-Prot
Match: ATX3_MOUSE (Ataxin-3 OS=Mus musculus GN=Atxn3 PE=1 SV=2) HSP 1 Score: 87.4261 bits (215), Expect = 9.907e-17 Identity = 49/161 (30.43%), Postives = 85/161 (52.80%), Query Frame = -1 Query: 315 ALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKECPISSSDSSNGYGQWLSPEDAERITKSCNTREGPKRIKLTQQHSDPFLSAEEADRLLEMEDEDLKAAIAAS 797 AL+VW L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ G+SIF+V+G+ P +C ++ Q + + R K + + L A + + + +++DL+ A+A S Sbjct: 83 ALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLP-DC------EADQLLQMIKVQQMHRPKLIGEELAHLKEQSALKADLERVLEAADGSGIFDEDEDDLQRALAIS 236
BLAST of CX671384 vs. ExPASy Swiss-Prot
Match: ATX3_RAT (Ataxin-3 OS=Rattus norvegicus GN=Atxn3 PE=2 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.294e-16 Identity = 38/88 (43.18%), Postives = 59/88 (67.05%), Query Frame = -1 Query: 534 ALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFP 797 AL+VW L++I N P + +IDP E +FIC+ +HWF +RK+ +W+N +SL PE +S YL+ +L L+ G+SIF+V+G+ P Sbjct: 83 ALKVWGLELILFNSPEYQRLRIDPINERSFICNYKEHWFTVRKLGKQWFNLNSLLTGPELISDTYLALFLAQLQQEGYSIFVVKGDLP 170
BLAST of CX671384 vs. ExPASy Swiss-Prot
Match: ATX3L_HUMAN (Putative ataxin-3-like protein OS=Homo sapiens GN=ATXN3L PE=5 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 5.436e-15 Identity = 54/174 (31.03%), Postives = 83/174 (47.70%), Query Frame = -1 Query: 312 ALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFPKEC---------PISSSDSSNGYGQWLSPEDAERITKSC--NTREGPKRIKLTQQHSDPFLSAEEADRL-LEMEDEDLKAAIAASL 797 AL+ W L++I N P + IDP E +FIC+ HWF IRK W+N +SL A PE +S L+ +L L+ +S+F+V+G+ P +C + D+ G+ L + R+ K+ E + Q + F A E R EDE L++ I S+ Sbjct: 83 ALKFWGLEIIHFNNPEYQKLGIDPINERSFICNYKQHWFTIRKFGKHWFNLNSLLAGPELISDTCLANFLARLQQQAYSVFVVKGDLP-DCEADQLLQIISVEEMDTPKLNGKKLVKQKEHRVYKTVLEKVSEESDESGTSDQDEEDFQRALELSRQETNREDEHLRSTIELSM 255
BLAST of CX671384 vs. ExPASy Swiss-Prot
Match: ATX3_CAEEL (Ataxin-3 homolog OS=Caenorhabditis elegans GN=atx-3 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.596e-12 Identity = 31/91 (34.07%), Postives = 54/91 (59.34%), Query Frame = -1 Query: 531 QKALEVWDLQVIPLNCPIAEPAQIDPELENAFICHLHDHWFCIRKVNGEWYNFDSLYAAPEHLSKFYLSAYLDSLKGFGWSIFIVRGNFPK 803 +KALE + L++ + P + +P A+IC+L +HWF +RK +W+ +S+ P+ LS Y+S +L + G+SIF+V+G P+ Sbjct: 79 EKALETFSLKLTNIENPAMVDYKNNPLTARAYICNLREHWFVLRKFGNQWFELNSVNRGPKLLSDTYVSMFLHQVSSEGYSIFVVQGVLPR 169 The following BLAST results are available for this feature:
BLAST of CX671384 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX671384 ID=CX671384; Name=CX671384; organism=Citrus sinensis; type=EST; length=803bpback to top |