CV712522
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_CITSI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Citrus sinensis GN=ndhD PE=3 SV=1) HSP 1 Score: 477.248 bits (1227), Expect = 4.140e-134 Identity = 244/255 (95.69%), Postives = 244/255 (95.69%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 RSYPVALE AVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS Sbjct: 203 RSYPVALEIIFYIGFFIAFAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_VITVI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Vitis vinifera GN=ndhD PE=3 SV=1) HSP 1 Score: 444.506 bits (1142), Expect = 2.974e-124 Identity = 222/255 (87.06%), Postives = 234/255 (91.76%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPW ++VGT+QIIYAASTS GQRNLKKRIAYSSVSHMGFII+GIGSITDTGLNGA+LQIISHG + AALFFLAGTSYDRIR YLDEMGG+AIP+PKIFT+FSILSMASLALPGMSGFVAELIVFFGIITSQKF LMPKI+ITFVMAIGMILTPIYSLSM RQMFYGYKLFNAPNSYFFDS Sbjct: 203 QSYPVALEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLVVVGTMQIIYAASTSSGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFLGAALFFLAGTSYDRIRLIYLDEMGGIAIPMPKIFTMFSILSMASLALPGMSGFVAELIVFFGIITSQKFLLMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNAPNSYFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_PANGI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Panax ginseng GN=ndhD PE=3 SV=1) HSP 1 Score: 442.965 bits (1138), Expect = 8.653e-124 Identity = 221/255 (86.67%), Postives = 233/255 (91.37%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPW +IVGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGFI++GIGSITDTGLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AIP+PKIFT+F+ SMASLALPGMSGFVAELIVFFGIITSQK+ LMPKI+ITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSY FDS Sbjct: 203 QSYPVALEIIFYIGFFIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLVIVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFILIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTMFTSFSMASLALPGMSGFVAELIVFFGIITSQKYLLMPKILITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYVFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_GOSHI (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Gossypium hirsutum GN=ndhD PE=3 SV=1) HSP 1 Score: 441.039 bits (1133), Expect = 3.288e-123 Identity = 221/255 (86.67%), Postives = 234/255 (91.76%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPW +IVGT+QIIYAASTS GQRNLKKRIAYSSVSHMGFII+GIGSITDTGLNGA+LQIISHG I AALFFLAGTSYDR+R YLDEMGG+A+ IPKIFT+FSILSMASLALPGMSGFVAELIVFFGIITSQK+FLMPKI+ITFVMAIGMILTPIYSLSM RQMFYGYKLFNAP+SYFFDS Sbjct: 203 QSYPVALEIIFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLIIVGTMQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRMRLVYLDEMGGMAVSIPKIFTMFSILSMASLALPGMSGFVAELIVFFGIITSQKYFLMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNAPSSYFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_GOSBA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Gossypium barbadense GN=ndhD PE=3 SV=1) HSP 1 Score: 441.039 bits (1133), Expect = 3.288e-123 Identity = 221/255 (86.67%), Postives = 234/255 (91.76%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPW +IVGT+QIIYAASTS GQRNLKKRIAYSSVSHMGFII+GIGSITDTGLNGA+LQIISHG I AALFFLAGTSYDR+R YLDEMGG+A+ IPKIFT+FSILSMASLALPGMSGFVAELIVFFGIITSQK+FLMPKI+ITFVMAIGMILTPIYSLSM RQMFYGYKLFNAP+SYFFDS Sbjct: 203 QSYPVALEIIFYIGFLIAFAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLIIVGTMQIIYAASTSLGQRNLKKRIAYSSVSHMGFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRMRLVYLDEMGGMAVSIPKIFTMFSILSMASLALPGMSGFVAELIVFFGIITSQKYFLMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNAPSSYFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_PLAOC (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Platanus occidentalis GN=ndhD PE=3 SV=1) HSP 1 Score: 439.884 bits (1130), Expect = 7.325e-123 Identity = 221/255 (86.67%), Postives = 230/255 (90.20%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPW MIVGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGF I+GIGSITD GLNGAVLQIISHG I AALFFLAGTSYDRIR YLDEMGG+AI +PKIFT+FS SMASLALPGMSGFVAELIVFFGIITS K+FLMPKI+ITFVMAIGMILTPIYSLSM RQMFYGYKLFNAPNSYFFDS Sbjct: 203 QSYPVALEIMFYFGFLIAYAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFTIIGIGSITDAGLNGAVLQIISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAISMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSPKYFLMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNAPNSYFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_LACSA (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Lactuca sativa GN=ndhD PE=3 SV=1) HSP 1 Score: 436.802 bits (1122), Expect = 6.201e-122 Identity = 217/255 (85.10%), Postives = 230/255 (90.20%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE AVKLPI+P HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPW MIVGT+QIIYAASTSPGQRNLKKRIAYSSVSHMGFI++GI SITDTGLNGA+LQIISHG I AALFFLAGTSYDRIR YLD+MGG+AIP+PKIFT+FS SMASLALPGMSGFVAE+IVF GIITSQK+ LMPKI ITFVMAIGMILTPIYSLSMLRQMFYGYKLFN PN+Y FDS Sbjct: 203 QSYPVALEIIFYIGFFIAFAVKLPILPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSPGQRNLKKRIAYSSVSHMGFILIGIASITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLVYLDQMGGVAIPMPKIFTMFSSFSMASLALPGMSGFVAEVIVFLGIITSQKYLLMPKIAITFVMAIGMILTPIYSLSMLRQMFYGYKLFNTPNAYVFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_NANDO (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Nandina domestica GN=ndhD PE=3 SV=1) HSP 1 Score: 435.647 bits (1119), Expect = 1.382e-121 Identity = 218/255 (85.49%), Postives = 230/255 (90.20%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPW MIVGT+QIIYAASTS GQRNLKKRIAYSSVSHMGF ILGI SITDTGLNGA+LQ+ISHG I AALFFLAGTSYDRIR YLDEMGG+AIP+PKIFTLFS SMASLALPGMSGFVAEL+VFFGIITS+KFFLMPKI+ITFV AIGMILTPIYSLSMLRQ+FYGYK FN PNS+FFDS Sbjct: 203 QSYPVALEILLYFGFFIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIVGTIQIIYAASTSLGQRNLKKRIAYSSVSHMGFTILGISSITDTGLNGAILQMISHGFIGAALFFLAGTSYDRIRLVYLDEMGGIAIPMPKIFTLFSSFSMASLALPGMSGFVAELVVFFGIITSEKFFLMPKILITFVTAIGMILTPIYSLSMLRQIFYGYKQFNVPNSHFFDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_CHLSC (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Chloranthus spicatus GN=ndhD PE=3 SV=1) HSP 1 Score: 435.261 bits (1118), Expect = 1.804e-121 Identity = 217/255 (85.10%), Postives = 228/255 (89.41%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYPVALE AVK PIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGL+RINMELLPHAHSIFSPW MIVGT+Q+IYAASTSPGQRNLKKRIAYSSVSHM FII+GIGSITDTGLNGA+LQIISHG I AALFFLAGTSYDRIR YLDEMGG+AIP+PKIFT+FS SMASLALPGMSGFVAE IVFFGIITS K+F MPKI+ITFVMAIGMILTPIYSLSM RQMFYGYKLFN PNSYF DS Sbjct: 203 QSYPVALEILFYFGFLIAYAVKSPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLVRINMELLPHAHSIFSPWLMIVGTIQVIYAASTSPGQRNLKKRIAYSSVSHMAFIIIGIGSITDTGLNGAILQIISHGFIGAALFFLAGTSYDRIRLIYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAESIVFFGIITSPKYFFMPKILITFVMAIGMILTPIYSLSMSRQMFYGYKLFNVPNSYFVDS 457
BLAST of CV712522 vs. ExPASy Swiss-Prot
Match: NU4C_CERDE (NAD(P)H-quinone oxidoreductase chain 4, chloroplastic OS=Ceratophyllum demersum GN=ndhD PE=3 SV=1) HSP 1 Score: 434.876 bits (1117), Expect = 2.356e-121 Identity = 220/255 (86.27%), Postives = 230/255 (90.20%), Query Frame = -2 Query: 3 RSYPVALEXXXXXXXXXXXAVKLPIIPFHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWFMIVGTVQIIYAASTSPGQRNLKKRIAYSSVSHMGFIILGIGSITDTGLNGAVLQIISHGLISAALFFLAGTSYDRIRFAYLDEMGGLAIPIPKIFTLFSILSMASLALPGMSGFVAELIVFFGIITSQKFFLMPKIVITFVMAIGMILTPIYSLSMLRQMFYGYKLFNAPNSYFFDS 767 +SYP+ALE AVKLPIIP HTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPW MIVGTVQIIYAASTS GQRNLKKRIAYSSVSHMGFII+GI SITDTGLNGAVLQIISHG I AALFFLAGTSYDRIR YLDEMGG+AIP+PKIFT+FS SMASLALPGMSGFVAELIVFFGIITS K+ LMPK++ITFVMAIG+ILTPIYSLSMLRQMFYGYKLFN PNSYF DS Sbjct: 203 QSYPMALEILFYFGFLIAYAVKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRINMELLPHAHSIFSPWLMIVGTVQIIYAASTSFGQRNLKKRIAYSSVSHMGFIIIGICSITDTGLNGAVLQIISHGFIGAALFFLAGTSYDRIRIVYLDEMGGIAIPMPKIFTMFSSFSMASLALPGMSGFVAELIVFFGIITSPKYLLMPKVLITFVMAIGIILTPIYSLSMLRQMFYGYKLFNVPNSYFVDS 457 The following BLAST results are available for this feature:
BLAST of CV712522 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 487
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712522 ID=CV712522; Name=CV712522; organism=Citrus sinensis; type=EST; length=768bpback to top |