CV712172
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB44_ARATH (Transcription factor MYB44 OS=Arabidopsis thaliana GN=MYB44 PE=2 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.845e-63 Identity = 131/214 (61.21%), Postives = 149/214 (69.63%), Query Frame = 1 Query: 118 DRIKGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMLTENGIFLNCNGYD-ADFGNSIQQQPLKLKRSVSAGSSVPVTTGLYMXXXXXXXXXXXXXXXXXXXXNYNIYKPVARSGGINVDVNVVPEP-ETTSSSNDPPTSLS 753 DRIKGPWSPEEDE L++LV K+GPRNW++ISKSIPGRSGKSCRLRWCNQLSPQVEHR F+ EEDE I RAHA+FGNKWATIARLLNGRTDNA+KNHWNSTLKRK C GYD + S +P +KRSVSAGS PV TGLYM + ++KPV R G + V+P P ET+SSS+DPPTSLS Sbjct: 3 DRIKGPWSPEEDEQLRRLVVKYGPRNWTVISKSIPGRSGKSCRLRWCNQLSPQVEHRPFSAEEDETIARAHAQFGNKWATIARLLNGRTDNAVKNHWNSTLKRK-------------CGGYDHRGYDGSEDHRP--VKRSVSAGSP-PVVTGLYMSPGSPTGSDVSDSSTIPILPSVELFKPVPRPGAV-----VLPLPIETSSSSDDPPTSLS 195
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB_MOUSE (Myb proto-oncogene protein OS=Mus musculus GN=Myb PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.377e-33 Identity = 62/102 (60.78%), Postives = 82/102 (80.39%), Query Frame = 1 Query: 124 IKGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 IKGPW+ EED+ + +LVQK+GP+ WS+I+K + GR GK CR RW N L+P+V+ ++T EED +I +AH R GN+WA IA+LL GRTDNAIKNHWNST++RK Sbjct: 91 IKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB_HUMAN (Myb proto-oncogene protein OS=Homo sapiens GN=MYB PE=1 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.377e-33 Identity = 62/102 (60.78%), Postives = 82/102 (80.39%), Query Frame = 1 Query: 124 IKGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 IKGPW+ EED+ + +LVQK+GP+ WS+I+K + GR GK CR RW N L+P+V+ ++T EED +I +AH R GN+WA IA+LL GRTDNAIKNHWNST++RK Sbjct: 91 IKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB_CHICK (Myb proto-oncogene protein OS=Gallus gallus GN=MYB PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.377e-33 Identity = 62/102 (60.78%), Postives = 82/102 (80.39%), Query Frame = 1 Query: 124 IKGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 IKGPW+ EED+ + +LVQK+GP+ WS+I+K + GR GK CR RW N L+P+V+ ++T EED +I +AH R GN+WA IA+LL GRTDNAIKNHWNST++RK Sbjct: 91 IKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYB_BOVIN (Myb proto-oncogene protein OS=Bos taurus GN=MYB PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.377e-33 Identity = 62/102 (60.78%), Postives = 82/102 (80.39%), Query Frame = 1 Query: 124 IKGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 IKGPW+ EED+ + +LVQK+GP+ WS+I+K + GR GK CR RW N L+P+V+ ++T EED +I +AH R GN+WA IA+LL GRTDNAIKNHWNST++RK Sbjct: 91 IKGPWTKEEDQRVIELVQKYGPKRWSVIAKHLKGRIGKQCRERWHNHLNPEVKKTSWTEEEDRIIYQAHKRLGNRWAEIAKLLPGRTDNAIKNHWNSTMRRK 192
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYBA_MOUSE (Myb-related protein A OS=Mus musculus GN=Mybl1 PE=2 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.798e-33 Identity = 62/102 (60.78%), Postives = 81/102 (79.41%), Query Frame = 1 Query: 124 IKGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 IKGPW+ EED+ + +LVQK+GP+ WSLI+K + GR GK CR RW N L+P+V+ ++T EED +I AH R GN+WA IA+LL GRTDN+IKNHWNST++RK Sbjct: 86 IKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRK 187
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYBA_HUMAN (Myb-related protein A OS=Homo sapiens GN=MYBL1 PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.798e-33 Identity = 62/102 (60.78%), Postives = 81/102 (79.41%), Query Frame = 1 Query: 124 IKGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 IKGPW+ EED+ + +LVQK+GP+ WSLI+K + GR GK CR RW N L+P+V+ ++T EED +I AH R GN+WA IA+LL GRTDN+IKNHWNST++RK Sbjct: 86 IKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEEEDRIIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRK 187
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYBQ_DICDI (Myb-like protein Q OS=Dictyostelium discoideum GN=mybQ PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.349e-33 Identity = 73/151 (48.34%), Postives = 96/151 (63.58%), Query Frame = 1 Query: 124 IKGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKC---SSMLTENGIFLNCNGYDADFGNSIQQQPLKLKRSVSAGSSVPVTT 567 +KGPW EED L +LV K GP+ WS I+ IPGR GK CR RW N LSP+V +TPEED++II AHA GNKW I+++L+GR NAIKNHWNSTL +K S L + + + DA+ G+S P+ L +S S+ ++ TT Sbjct: 276 VKGPWKDEEDAKLVELVNKCGPKEWSSIAAKIPGRIGKQCRERWFNHLSPEVRKTNWTPEEDKIIIDAHASLGNKWTAISKMLDGRPANAIKNHWNSTLLKKIGGDSKSLNKEKDDDDDDDEDAEDGSSPVLSPISLYQSSSSTTTTTTTT 426
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYBB_XENLA (Myb-related protein B OS=Xenopus laevis GN=mybl2 PE=2 SV=2) HSP 1 Score: 140.584 bits (353), Expect = 8.925e-33 Identity = 69/154 (44.81%), Postives = 98/154 (63.64%), Query Frame = 1 Query: 118 DRIKGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRKCSSMLTENGIFLNCNG-------YDADFGNSIQQQPLKLKRSVSAGSSVP 558 D +KGPW+ EEDE + +LV+K+G ++W+LI+K + GR GK CR RW N L+P+V+ ++T EED +I +AH GN+WA IA+LL GRTDNA+KNHWNST+KRK E G FL D+ + + Q + L V +++P Sbjct: 80 DLVKGPWTKEEDEKVIELVKKYGTKHWTLIAKQLRGRMGKQCRERWHNHLNPEVKKSSWTEEEDRIICQAHKVLGNRWAEIAKLLPGRTDNAVKNHWNSTIKRK-----VETGGFLTVKASGQQEEREDSGYQAAEDQNHVLLSEPVERSANIP 228
BLAST of CV712172 vs. ExPASy Swiss-Prot
Match: MYBA_CHICK (Myb-related protein A OS=Gallus gallus GN=MYBL1 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.925e-33 Identity = 61/102 (59.80%), Postives = 80/102 (78.43%), Query Frame = 1 Query: 124 IKGPWSPEEDEALQQLVQKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTPEEDEMIIRAHARFGNKWATIARLLNGRTDNAIKNHWNSTLKRK 429 IKGPW+ EED+ + +LVQK+GP+ WSLI+K + GR GK CR RW N L+P+V+ ++T ED +I AH R GN+WA IA+LL GRTDN+IKNHWNST++RK Sbjct: 86 IKGPWTKEEDQRVIELVQKYGPKRWSLIAKHLKGRIGKQCRERWHNHLNPEVKKSSWTEAEDRVIYEAHKRLGNRWAEIAKLLPGRTDNSIKNHWNSTMRRK 187 The following BLAST results are available for this feature:
BLAST of CV712172 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 73
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Sequences
The
following sequences are available for this feature:
EST sequence >CV712172 ID=CV712172; Name=CV712172; organism=Citrus sinensis; type=EST; length=754bpback to top |