CN192453

Overview
NameCN192453
Unique NameCN192453
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length752
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192453 vs. ExPASy Swiss-Prot
Match: PX24D_DICDI (PXMP2/4 family protein 4 OS=Dictyostelium discoideum GN=DDB_G0290631 PE=3 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.193e-15
Identity = 35/106 (33.02%), Postives = 59/106 (55.66%), Query Frame = -1
Query:  381 ESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFI 698
            + YD  R++RM  +G  + GP  H+WF ++ K FPK+       K+ + Q +  P+   +F S    L+G+S ++IV +LK+D L T     + WP  +F+ F +I
Sbjct:   53 KKYDFKRSMRMAVFGFAVTGPLFHYWFKYLDKHFPKKSYRHAFIKLTIDQVVCSPVFNFLFFSGMGILEGKSKDDIVEKLKKDWLTTYVSDCVVWPFINFVNFAYI 158          
BLAST of CN192453 vs. ExPASy Swiss-Prot
Match: MPV17_XENLA (Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2)

HSP 1 Score: 82.4185 bits (202), Expect = 2.864e-15
Identity = 39/131 (29.77%), Postives = 66/131 (50.38%), Query Frame = -1
Query:  306 ESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFIPVHLQPLVSNSFSYLWTIYLTYTAS 698
            + + + RT++M G G   +GP +  W+  + ++ P       LKKM + Q  + P     FLS+ ++L G SGE+I  +LKRD    +      WP      F FIP++ +  V    + +W  YL++ A+
Sbjct:   45 KGHSIERTVKMMGIGFCFVGPVVGGWYKILDRIIPGSGKPVALKKMLLDQVAFAPCFLGCFLSIASALNGLSGEQIWGKLKRDYKDALITNYYIWPAVQVANFYFIPLYHRLAVVQFVAIIWNSYLSWKAN 175          
BLAST of CN192453 vs. ExPASy Swiss-Prot
Match: MPV17_DROME (Mpv17-like protein OS=Drosophila melanogaster GN=CG11077 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.571e-13
Identity = 40/131 (30.53%), Postives = 65/131 (49.62%), Query Frame = -1
Query:  318 SSESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPK--QDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFIPVHLQPLVSNSFSYLWTIYLT 704
            S + +D  RTLR G  G++ +GPTL  W++F+    PK    +   + KM + QT++ P  T+    L     GE  + I  R+    L  + +  M WP    + FRF+P+  Q L +   + +W  YL+
Sbjct:   33 SLDEWDAGRTLRFGIVGLVFVGPTLRRWYHFLESRVPKTYSPMRRGVTKMLVDQTLFAPPFTMAMSFLVPLSNGEPIDRIRQRILDSYLSILVRNYMLWPAAQMLNFRFVPLGYQVLYAQFIALVWNCYLS 163          
BLAST of CN192453 vs. ExPASy Swiss-Prot
Match: PX24C_DICDI (PXMP2/4 family protein 3 OS=Dictyostelium discoideum GN=DDB_G0290223 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.798e-13
Identity = 38/119 (31.93%), Postives = 64/119 (53.78%), Query Frame = -1
Query:  297 LILGPTLHFWFNFVSKLFPK-QDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFIPVHLQPLVSNSFSYLWTIYLTYTASLEK 650
            LI  P +H+W   + +LF   +D   +  K+ + Q ++ P + + F S+ A L G+  + I+ +L  DL PT+      WP+   I FRF+P HL+ L  N   + W IYL+  A+ ++
Sbjct:   66 LISSPLVHYWHIILDRLFKNIKDKYQSWGKLIVDQLVFAPFINIAFYSVLAILDGKP-KSILFKLYFDLFPTLKASWKVWPLAQLINFRFVPSHLRVLFGNLVGFCWGIYLSILATKKR 183          
BLAST of CN192453 vs. ExPASy Swiss-Prot
Match: PX24A_DICDI (PXMP2/4 family protein 1 OS=Dictyostelium discoideum GN=DDB_G0277335 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 46/142 (32.39%), Postives = 70/142 (49.30%), Query Frame = -1
Query:  318 LADLSSQTIASSESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVV-FLSLNASLQGESGE--EIVARLKRDLLPTMFKGVMYWPVCDFITFRFIPVHLQPLVSNSFSYLWTIYLT 734
            L D  +Q I  +  YD  RTL M   G  I+ P +HFWF F+ K F K      + K+ + Q  +GP + V    S+    QG + +  +   ++K+D  P + K  M WP+ + I FRF+    + L+SN  S  W   L+
Sbjct:   35 LGDTLAQKI-ENRGYDPKRTLMMCTVGTFIVVPQIHFWFKFLDKTFTKPGWAGAIPKVVVDQLTFGPYLFVCNMTSVQLFHQGFNFDTHQWKDKMKKDFFPVLQKAWMIWPLTNCILFRFVHPDYRILISNLVSVGWNCILS 175          
BLAST of CN192453 vs. ExPASy Swiss-Prot
Match: MPV17_DANRE (Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.018e-12
Identity = 39/125 (31.20%), Postives = 59/125 (47.20%), Query Frame = -1
Query:  306 RTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFIPVHLQPLVSNSFSYLWTIYLTYTAS 680
            RT +M   G   +GP +  W+  + KL       A LKKM + Q  + P     FL +  +L G + EE VA+L+RD    +      WP      F FIP+H +  V    + +W  YL++ A+
Sbjct:   51 RTAKMMSIGFFFVGPVVGGWYKVLDKLVTGGTKSAALKKMLVDQVGFAPCFLGAFLGITGTLNGLTVEENVAKLQRDYTDALISNYYLWPPVQIANFYFIPLHHRLAVVQIVAVVWNSYLSWKAN 175          
BLAST of CN192453 vs. ExPASy Swiss-Prot
Match: MPV17_BOVIN (Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.269e-12
Identity = 41/145 (28.28%), Postives = 66/145 (45.52%), Query Frame = -1
Query:  309 LADLSSQTIASS---ESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFIPVHLQPLVSNSFSYLWTIYLTYTA 734
            L D+ SQ +      +++   RTL M   G   +GP +  W+  + +L P    V  LKKM + Q  + P     FL L  +L G S ++  A+L+RD    +      WP      F  +P+H +  V    + +W  YL++ A
Sbjct:   29 LGDVISQQLVERRGLQAHQAGRTLTMASLGCGFVGPVVGGWYRVLDRLIPGTTKVDALKKMLLDQGGFAPCFLGCFLPLVGTLNGLSAQDNWAKLQRDFPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVIWNSYLSWKA 173          
BLAST of CN192453 vs. ExPASy Swiss-Prot
Match: MPV17_RAT (Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 5.055e-12
Identity = 42/145 (28.97%), Postives = 63/145 (43.45%), Query Frame = -1
Query:  309 LADLSSQTIASS---ESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQDLVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFIPVHLQPLVSNSFSYLWTIYLTYTA 734
            L D+ SQ +      + +   RTL M   G   +GP +  W+  +  L P    V  LKKM + Q  + P     FL L   L G S ++  A+LKRD    +      WP      F  +P+H +  V    + +W  YL++ A
Sbjct:   29 LGDIISQQLVERRGLQQHQTGRTLTMASLGCGFVGPVVGGWYRVLDHLIPGTTKVNALKKMLLDQGGFAPCFLGCFLPLVGVLNGMSAQDNWAKLKRDYPDALITNYYLWPAVQLANFYLVPLHYRLAVVQCVAVVWNSYLSWKA 173          
BLAST of CN192453 vs. ExPASy Swiss-Prot
Match: SYM1_GIBZE (Protein SYM1 OS=Gibberella zeae GN=SYM1 PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.471e-11
Identity = 43/146 (29.45%), Postives = 74/146 (50.68%), Query Frame = -1
Query:  306 DLSSQTIAS---SESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQD--LVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFIPVHLQPLVSNSFSYLWTIYLTYTAS 728
            D+++Q +     ++ +DLVRT RM  YG  + GP    WF F+++    ++      L ++A  Q  + P+M  VFLS  A+++G+S +E   R+ +   P +    M WP    I F  IP+  +   +N  +  W  YL++  S
Sbjct:   32 DVTAQQLVEKRGAQKHDLVRTGRMALYGGFVFGPVATTWFAFLARRVNVRNNKKAEVLARVACDQLGFAPVMIGVFLSSMATMEGKSVKE---RIDKTWWPALKANWMVWPAVQVINFSLIPLQYRLFFANIIAIGWNSYLSWVNS 174          
BLAST of CN192453 vs. ExPASy Swiss-Prot
Match: YD1E_SCHPO (Uncharacterized protein C4G9.14 OS=Schizosaccharomyces pombe GN=SPAC4G9.14 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.509e-11
Identity = 40/139 (28.78%), Postives = 69/139 (49.64%), Query Frame = -1
Query:  294 ASSESYDLVRTLRMGGYGMLILGPTLHFWFNFVSKLFPKQD-LVATLKKMAMGQTIYGPIMTVVFLSLNASLQGESGEEIVARLKRDLLPTMFKGVMYWPVCDFITFRFIPVHLQPLVSNSFSYLWTIYLTYTASLEKA 707
            AS+   D+ RT+R   YG L L P    WF  +S +   ++  +A + ++A+ Q I+ P+  V F       + +S E + +  ++   PT+    + WP      F F+P+ LQ + +N+ S +WT YL+   S   A
Sbjct:   82 ASTSKLDVHRTIRYAAYG-LCLTPIQFRWFVALSNVIQTENPFIAIVLRVALDQFIFAPLGIVFFFLFMGITECKSYERLKSYFRKHYWPTLKANYILWPAVQLFNFTFVPLVLQVIFANAVSMVWTAYLSLKNSSPNA 219          
The following BLAST results are available for this feature:
BLAST of CN192453 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
PX24D_DICDI2.193e-1533.02PXMP2/4 family protein 4 OS=Dictyostelium discoide... [more]
MPV17_XENLA2.864e-1529.77Protein Mpv17 OS=Xenopus laevis GN=mpv17 PE=2 SV=2[more]
MPV17_DROME1.571e-1330.53Mpv17-like protein OS=Drosophila melanogaster GN=C... [more]
PX24C_DICDI7.798e-1331.93PXMP2/4 family protein 3 OS=Dictyostelium discoide... [more]
PX24A_DICDI1.018e-1232.39PXMP2/4 family protein 1 OS=Dictyostelium discoide... [more]
MPV17_DANRE1.018e-1231.20Protein Mpv17 OS=Danio rerio GN=mpv17 PE=2 SV=1[more]
MPV17_BOVIN2.269e-1228.28Protein Mpv17 OS=Bos taurus GN=MPV17 PE=2 SV=1[more]
MPV17_RAT5.055e-1228.97Protein Mpv17 OS=Rattus norvegicus GN=Mpv17 PE=2 S... [more]
SYM1_GIBZE1.471e-1129.45Protein SYM1 OS=Gibberella zeae GN=SYM1 PE=3 SV=1[more]
YD1E_SCHPO2.509e-1128.78Uncharacterized protein C4G9.14 OS=Schizosaccharom... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0006O15_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006O15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192453 ID=CN192453; Name=CN192453; organism=Citrus sinensis; type=EST; length=752bp
CTTTTTCGTGTGATCAGAGCAGTTTTTTACTGTGGAAATTGCCCACTAAA
ACAATGTCATCAACCCACTACTTTACAACCTCTGATATGTTGTCCAATTG
CATTATCTAGTAAATAATACCACTAAGAGAAAAGAACAAAATATTAATGG
GCGCTGCTTGGTCTACATGAGCAATGGATCAAGTTCATAGCAGTTCTGCG
TCAACCATCAGCTGAGAGTATCTAAGGTAGATCTTGGGCTTGAACGTGAG
ATGGATAGAGGGAACACTGAACCAATCAGCTTGCAGTTGTGACAGCTTTT
TCTAGACTCGCCGTATACGTCAGATAGATAGTCCATAGATATGAAAATGA
ATTGCTCACCAATGGCTGCAAATGGACAGGGATGAATCTGAATGTGATAA
AATCACATACAGGCCAGTACATGACACCCTTGAACATGGTAGGGAGCAAG
TCTCGTTTTAATCGAGCAACAATCTCTTCTCCACTTTCACCTTGTAAACT
TGCATTCAGTGATAAGAACACAACAGTCATAATTGGTCCATAAATTGTCT
GCCCCATTGCCATCTTCTTCAATGTAGCAACCAGATCTTGCTTCGGAAAC
AATTTTGACACAAAATTGAACCAAAAGTGCAATGTGGGACCTAAAATTAA
CATCCCATATCCACCCATCCGTAATGTCCTCACCAGATCATAAGATTCTG
AAGATGCAATAGTCTGCGATGACAAATCAGCCAGCAATATAAATAAGAGA
GC
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