CN192052

Overview
NameCN192052
Unique NameCN192052
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length774
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS3_SPIOL (Ribose-phosphate pyrophosphokinase 3, mitochondrial OS=Spinacia oleracea GN=PRS3 PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 7.415e-91
Identity = 157/186 (84.41%), Postives = 172/186 (92.47%), Query Frame = -2
Query:  216 SLVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQI 773
            SLVTFDIHA QERFYFGD ILPCFES IPLL  +LQQLPDSDNI+IAFPDDGAWKRFHKQLQHFPMIVC KVR+G+QRIVR+KEGDP GRH+VIVDDLVQSGGTLIECQKVLAAHGAAK+SAYVTHGIFPN SWERFK DT G PE G+T+FWI+DSCP+TVK V ++PPFEV+SLAGSIA+ALQI
Sbjct:  221 SLVTFDIHALQERFYFGDNILPCFESGIPLLKKKLQQLPDSDNITIAFPDDGAWKRFHKQLQHFPMIVCAKVREGDQRIVRLKEGDPTGRHVVIVDDLVQSGGTLIECQKVLAAHGAAKVSAYVTHGIFPNKSWERFKPDTAGCPEEGMTHFWITDSCPLTVKMVKNRPPFEVISLAGSIAAALQI 406          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS3_ARATH (Ribose-phosphate pyrophosphokinase 3 OS=Arabidopsis thaliana GN=PRS3 PE=2 SV=1)

HSP 1 Score: 330.487 bits (846), Expect = 6.277e-90
Identity = 159/186 (85.48%), Postives = 171/186 (91.94%), Query Frame = -2
Query:  216 SLVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQI 773
            SLVTFDIHA QERFYFGDTILPCFES IPLL +RLQ LPDSDNISIAFPDDGAWKRFHKQLQH+P IVCNKVR G++RIVRIKEGD  GRH+VIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFP +SW+RFK DT G P  GL+YFWI+DSC +TVKEVM+KPPFEVLSLAGSIASALQ+
Sbjct:  226 SLVTFDIHALQERFYFGDTILPCFESGIPLLKSRLQSLPDSDNISIAFPDDGAWKRFHKQLQHYPTIVCNKVRMGDKRIVRIKEGDAEGRHVVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPRSSWKRFKLDTKGDPAEGLSYFWITDSCGMTVKEVMNKPPFEVLSLAGSIASALQV 411          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS3_ORYSJ (Ribose-phosphate pyrophosphokinase 3 OS=Oryza sativa subsp. japonica GN=Os01g0723600 PE=2 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 2.468e-86
Identity = 149/186 (80.11%), Postives = 167/186 (89.78%), Query Frame = -2
Query:  216 SLVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQI 773
            SLV FDIHA QERFYFGD++LPCFES IPLL +RLQ+LPDSDNI+IAFPDDGAWKRF+KQLQHFPM+VCNKVR+G QRIVRIKEGDPRGRH+VIVDDLVQSGGTLIECQKVLA HGAAK+SAYVTHGIFPN SWE+F+ D G  P  GL++FWI+DSCP+TV  V  + PFE+LSLAG IASALQI
Sbjct:  224 SLVIFDIHALQERFYFGDSVLPCFESGIPLLKSRLQELPDSDNITIAFPDDGAWKRFYKQLQHFPMVVCNKVREGEQRIVRIKEGDPRGRHVVIVDDLVQSGGTLIECQKVLAEHGAAKVSAYVTHGIFPNKSWEKFQPDNGEGPGHGLSHFWITDSCPLTVNAVKDRQPFEILSLAGPIASALQI 409          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS4_ORYSJ (Ribose-phosphate pyrophosphokinase 4 OS=Oryza sativa subsp. japonica GN=Os02g0714600 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.358e-76
Identity = 135/186 (72.58%), Postives = 155/186 (83.33%), Query Frame = -2
Query:  216 SLVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQI 773
            S+V +DIHA QERFYFGD +LPCFE+ IPLLL RL+QLPD+DNI+IAFPDDGAWKRFHK L +FPM+VC KVR+G++RIVRIKEG+P GRH+VIVDDLVQSGGTL ECQKVLAAHGAAK+SAYVTH +FP  S+ERF             YFWI+DSCP TVK +  +PPFEVLSLAGSIA ALQI
Sbjct:  140 SVVIYDIHALQERFYFGDDVLPCFETGIPLLLQRLRQLPDADNITIAFPDDGAWKRFHKLLLNFPMVVCAKVREGDKRIVRIKEGNPEGRHVVIVDDLVQSGGTLRECQKVLAAHGAAKVSAYVTHAVFPKQSYERFTHTNSAGSADKFAYFWITDSCPQTVKAINQQPPFEVLSLAGSIADALQI 325          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS4_SPIOL (Ribose-phosphate pyrophosphokinase 4 OS=Spinacia oleracea GN=PRS4 PE=2 SV=1)

HSP 1 Score: 277.33 bits (708), Expect = 6.306e-74
Identity = 132/186 (70.97%), Postives = 152/186 (81.72%), Query Frame = -2
Query:  216 SLVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQI 773
            S+V +DIHA QERFYF D +LP FE+ IPLL  RL QLPD+D I +AFPDDGAWKRFHKQL HFPM+VC KVR+G++RIVR+KEG+P G H+VIVDDLVQSGGTLIECQKVLAAHGA K+SAYVTH +FP  S+ERF     G  +   TYFWI+DSCP TVK + +K PFEVLSLAGSIA ALQI
Sbjct:  134 SVVIYDIHALQERFYFSDNVLPLFETGIPLLKQRLDQLPDADKIVVAFPDDGAWKRFHKQLDHFPMVVCAKVREGDKRIVRLKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGATKVSAYVTHAVFPKNSFERFTHKDDGS-DKAFTYFWITDSCPRTVKSIANKAPFEVLSLAGSIADALQI 318          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS4_ARATH (Ribose-phosphate pyrophosphokinase 4 OS=Arabidopsis thaliana GN=PRS4 PE=2 SV=2)

HSP 1 Score: 275.789 bits (704), Expect = 1.835e-73
Identity = 129/186 (69.35%), Postives = 152/186 (81.72%), Query Frame = -2
Query:  216 SLVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHFPMIVCNKVRDGNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQI 773
            S+V +DIHA QERFYF D +LP FE+ IPLL  RLQQLP+++ + +AFPDDGAWKRFHK L H+P +VC KVR+G++RIVR+KEG+P G H+VIVDDLVQSGGTLIECQKVLAAHGA K+SAYVTHG+FP +SWERF     G  E    YFWI+DSCP TVK + +K PFEVLSLAGSIA ALQI
Sbjct:  153 SVVIYDIHALQERFYFADQVLPLFETGIPLLTKRLQQLPETEKVIVAFPDDGAWKRFHKLLDHYPTVVCTKVREGDKRIVRLKEGNPAGCHVVIVDDLVQSGGTLIECQKVLAAHGAVKVSAYVTHGVFPKSSWERFTHKKNGL-EEAFAYFWITDSCPQTVKAIGNKAPFEVLSLAGSIADALQI 337          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS_MARMS (Ribose-phosphate pyrophosphokinase OS=Marinomonas sp. (strain MWYL1) GN=prs PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.292e-14
Identity = 60/188 (31.91%), Postives = 96/188 (51.06%), Query Frame = -2
Query:  219 LVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKR---FHKQLQHFPMIVCNKVRD-GNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 770
            ++T D+HA Q + +F   +   +  A PLLL+ LQ+    +NI++  PD G   R   F K L    + + +K R   N+  +    GD  G+  V+VDD+  +GGTL    K L  HGAAK+ AY TH +    + E  K        S L    ++D+ P+T +E ++ P    LS++  +A A++
Sbjct:  125 VLTVDLHADQIQGFFDIPVDNVY--ATPLLLDDLQR-QGHENITVVSPDVGGVVRARAFAKLLDDADLAIIDKRRPRANEAQIMHLIGDVEGKTCVLVDDMCDTGGTLCAAAKALKEHGAAKVLAYCTHPVLSGKAIENIK-------NSVLDELVVTDTIPLT-QEALNCPQIRQLSMSDIMAEAVR 301          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS_UREPA (Ribose-phosphate pyrophosphokinase OS=Ureaplasma parvum GN=prs PE=3 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.134e-13
Identity = 57/192 (29.69%), Postives = 96/192 (50.00%), Query Frame = -2
Query:  216 SLVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQ--LQHFPMIVCNKVRDG-NQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPF---EVLSLAGSIASALQI 773
            S++T+DIH+ Q + +F D      E+   L+ +      DS NI+I  PD G  KR  +        + + +K R G NQ  +    GD + R  VIVDD++ +GGT++   K++   GA  I+   THG+F N + + F+Q    +         I+  C   + + +   PF   E++S+A +IA  ++I
Sbjct:  126 SVLTWDIHSLQTQGFF-DIPFDSLEAVWVLMKHYFSAYKDSSNITIVSPDYGGVKRAREISIATGATLAIVDKRRSGKNQVEINNVLGDVKDRDCVIVDDMIDTGGTILGAAKIVREKGAKSITIIATHGLFNNNARQHFQQAIKDR--------IINKIC---IADTIENEPFDGLEIVSIAPAIAKCIEI 305          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS_STRAW (Ribose-phosphate pyrophosphokinase OS=Streptomyces avermitilis GN=prs PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.359e-12
Identity = 53/189 (28.04%), Postives = 92/189 (48.68%), Query Frame = -2
Query:  219 LVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFHKQLQHF--PMIVCNKVRD---GNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 770
            ++T D+H  Q + +F   +   F  A+P+L + +    D   +++  PD G  +   +       P+ + +K RD    NQ  V    GD +GR  V+VDD++ +GGT+      L AHGA  +    THG+    + +R K        S ++ F  +D+ P   +  + K    VLS+A +IA+A++
Sbjct:  132 ILTVDLHTDQIQGFFDGPVDHLF--ALPILADYVGAKVDRSKLTVVSPDAGRVRVADRWCDRLDAPLAIVHKRRDKDVANQVTVHEVVGDVKGRVCVLVDDMIDTGGTICAAADALFAHGAEDVIVTATHGVLSGPAADRLK-------NSKVSEFVFTDTLPTPGELELDK--ITVLSIAPTIANAVR 309          
BLAST of CN192052 vs. ExPASy Swiss-Prot
Match: KPRS_SALTY (Ribose-phosphate pyrophosphokinase OS=Salmonella typhimurium GN=prs PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.171e-11
Identity = 58/188 (30.85%), Postives = 91/188 (48.40%), Query Frame = -2
Query:  219 LVTFDIHAXQERFYFGDTILPCFESAIPLLLNRLQQLPDSDNISIAFPDDGAWKRFH---KQLQHFPMIVCNKVRD-GNQRIVRIKEGDPRGRHIVIVDDLVQSGGTLIECQKVLAAHGAAKISAYVTHGIFPNASWERFKQDTGGKPESGLTYFWISDSCPVTVKEVMSKPPFEVLSLAGSIASALQ 770
            ++T D+HA Q + +F   +   F S  P+LL  + QL + DN  +  PD G   R     K L    M + +K R   N   V    GD  GR  V+VDD++ +GGTL +  + L   GA ++ AY TH IF   +    +        S +    + D+ P+T  E+ + P    L+L+G +A A++
Sbjct:  125 VLTVDLHAEQIQGFFDVPVDNVFGS--PILLEDMLQL-NLDNPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERGAKRVFAYATHPIFSGNAANNLR-------NSVIDEVVVCDTIPLT-DEIKALPNVRTLTLSGMLAEAIR 301          
The following BLAST results are available for this feature:
BLAST of CN192052 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
KPRS3_SPIOL7.415e-9184.41Ribose-phosphate pyrophosphokinase 3, mitochondria... [more]
KPRS3_ARATH6.277e-9085.48Ribose-phosphate pyrophosphokinase 3 OS=Arabidopsi... [more]
KPRS3_ORYSJ2.468e-8680.11Ribose-phosphate pyrophosphokinase 3 OS=Oryza sati... [more]
KPRS4_ORYSJ1.358e-7672.58Ribose-phosphate pyrophosphokinase 4 OS=Oryza sati... [more]
KPRS4_SPIOL6.306e-7470.97Ribose-phosphate pyrophosphokinase 4 OS=Spinacia o... [more]
KPRS4_ARATH1.835e-7369.35Ribose-phosphate pyrophosphokinase 4 OS=Arabidopsi... [more]
KPRS_MARMS3.292e-1431.91Ribose-phosphate pyrophosphokinase OS=Marinomonas ... [more]
KPRS_UREPA2.134e-1329.69Ribose-phosphate pyrophosphokinase OS=Ureaplasma p... [more]
KPRS_STRAW2.359e-1228.04Ribose-phosphate pyrophosphokinase OS=Streptomyces... [more]
KPRS_SALTY1.171e-1130.85Ribose-phosphate pyrophosphokinase OS=Salmonella t... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS06_0006E09_r Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0006E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN192052 ID=CN192052; Name=CN192052; organism=Citrus sinensis; type=EST; length=774bp
GAGGAAAAAACACATAATAGTTTGATTTTATTCAATCAGATTCAGATCAA
AACACCAGTAAATGTTTGAATAAACAAAAGCAAACGAGTATCCAAAAATA
ATATATCCCTGCCGCTTTCTTTTGTTTTTCTTTATTCATTGGTAAGATTG
CTCCTTCAAAATCAGCTCGGAACTCCTCTATATATGATATGACTAGATAT
TTCAAAACAAATTTATATCTGTAGAGCAGATGCAATGGAACCCGCAAGAC
TGAGAACTTCAAATGGTGGTTTGCTCATAACCTCTTTTACAGTCACTGGG
CAGGAGTCACTAATCCAGAAGTAGGTCAAGCCAGACTCAGGTTTTCCTCC
AGTATCTTGTTTAAATCGTTCCCACGACGCGTTAGGAAAAATCCCATGTG
TCACATAAGCGCTTATTTTTGCTGCTCCATGGGCTGCTAGCACTTTCTGA
CATTCAATTAGAGTGCCACCTGATTGAACCAGATCATCAACAATCACAAT
GTGGCGTCCTCGAGGGTCTCCCTCCTTAATGCGTACAATCCTTTGGTTAC
CATCCCGAACTTTATTACAAACAATCATTGGAAAGTGCTGCAGCTGCTTA
TGAAATCGTTTCCACGCACCATCATCAGGAAAAGCAATGGAAATATTGTC
AGAATCAGGGAGCTGTTGGAGCCTATTTAACAGCAAAGGTATTGCACTTT
CAAAGCATGGTAAAATAGTATCACCAAAGTAGAACCTCTCCTGNCATGCA
TGTATATCAAATGTCACTAAGCTA
back to top