GO242427
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO242427 vs. ExPASy Swiss-Prot
Match: BOP1_MONBE (Ribosome biogenesis protein BOP1 homolog OS=Monosiga brevicollis GN=37129 PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.022e-34 Identity = 63/110 (57.27%), Postives = 84/110 (76.36%), Query Frame = 1 Query: 1 VGSREGKLCWFDMDLSSKPYRVLKCHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHT-SSNGRGVMDCKFHPRQPWLSTAGADSVIRLY 327 +GS + +LCWFDMDLS KPY++L+ H + V FH+ YP+FASC DD +V HGMVY+DL QNPLIVP++I++ H +S+G GVMDC FHP QPWL +AG+D I+L+ Sbjct: 689 IGSYDKRLCWFDMDLSIKPYKILRYHKYALRQVCFHKKYPIFASCGDDGNVHVLHGMVYNDLGQNPLIVPVKIIKAHNQTSDGMGVMDCTFHPSQPWLFSAGSDGSIKLH 798
BLAST of GO242427 vs. ExPASy Swiss-Prot
Match: BOP1_CHLRE (Ribosome biogenesis protein BOP1 homolog OS=Chlamydomonas reinhardtii GN=CHLREDRAFT_111274 PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.744e-34 Identity = 69/112 (61.61%), Postives = 84/112 (75.00%), Query Frame = 1 Query: 1 VGSREGKLCWFDMDLSSKPYRVLKCHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILR-GHTSSNGRGVMDCKFHPRQPWLSTAGADSVIRLYCH 333 VGS + ++ W+D+DLS+KPY+ L+ H VAFHRSYPLFAS +DD T VFHGMVY+DL NPLIVP++ILR GHT + GV DC FHP QPW+ TAGADS I LYC+ Sbjct: 686 VGSDDKRVAWYDLDLSTKPYKALRYHSAPPRAVAFHRSYPLFASAADDGTVQVFHGMVYADLLTNPLIVPVKILRGGHTVTASEGVADCAFHPTQPWIFTAGADSKILLYCN 797
BLAST of GO242427 vs. ExPASy Swiss-Prot
Match: BOP1B_XENLA (Ribosome biogenesis protein bop1-B OS=Xenopus laevis GN=bop1-B PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.130e-33 Identity = 65/108 (60.19%), Postives = 82/108 (75.93%), Query Frame = 1 Query: 4 GSREGKLCWFDMDLSSKPYRVLKCHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHTSSNGRGVMDCKFHPRQPWLSTAGADSVIRLY 327 GS + KL WFDMDLS+KPY+VL+ H K + V+FH+SYPLFAS SDD + V HGMVY+DL QNPLIVP+++LRGH GV+D FHP QPW+ ++GAD IRL+ Sbjct: 620 GSYDSKLAWFDMDLSTKPYKVLRHHKKALRAVSFHKSYPLFASGSDDASVIVCHGMVYNDLLQNPLIVPVKVLRGHAIHRDLGVLDVMFHPTQPWVFSSGADGTIRLF 727
BLAST of GO242427 vs. ExPASy Swiss-Prot
Match: BOP1A_XENLA (Ribosome biogenesis protein bop1-A OS=Xenopus laevis GN=bop1-A PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.928e-33 Identity = 65/108 (60.19%), Postives = 83/108 (76.85%), Query Frame = 1 Query: 4 GSREGKLCWFDMDLSSKPYRVLKCHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHTSSNGRGVMDCKFHPRQPWLSTAGADSVIRLY 327 GS + KL WFDMDLS+KPY+VL+ H K + V+FH+SYPLFAS SDD + V HGMVY+DL QNPLIVP+++LRGH GV+D FHP QPW+ ++GAD+ IRL+ Sbjct: 620 GSYDSKLAWFDMDLSTKPYKVLRHHKKALRAVSFHKSYPLFASGSDDGSVIVCHGMVYNDLLQNPLIVPVKVLRGHAIHRDLGVLDVTFHPTQPWVFSSGADATIRLF 727
BLAST of GO242427 vs. ExPASy Swiss-Prot
Match: BOP1_DICDI (Ribosome biogenesis protein BOP1 homolog OS=Dictyostelium discoideum GN=DDB_G0281839 PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 5.610e-33 Identity = 63/109 (57.80%), Postives = 81/109 (74.31%), Query Frame = 1 Query: 1 VGSREGKLCWFDMDLSSKPYRVLKCHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHTSSNGRGVMDCKFHPRQPWLSTAGADSVIRLY 327 +G + K+CWFD+DLS +PY+VL H + V +H + PLFASCSDD + +VFHGMVY DL QN LIVPL+IL+ H S N GV+D FHP+QPW+ ++GADS IRLY Sbjct: 723 MGGYDKKVCWFDLDLSVRPYKVLNYHKMAVRKVIYHPTLPLFASCSDDLSIHVFHGMVYDDLLQNALIVPLKILKTHESINDLGVLDIVFHPKQPWIFSSGADSTIRLY 831
BLAST of GO242427 vs. ExPASy Swiss-Prot
Match: BOP1_XENTR (Ribosome biogenesis protein bop1 OS=Xenopus tropicalis GN=bop1 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 7.327e-33 Identity = 64/108 (59.26%), Postives = 82/108 (75.93%), Query Frame = 1 Query: 4 GSREGKLCWFDMDLSSKPYRVLKCHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHTSSNGRGVMDCKFHPRQPWLSTAGADSVIRLY 327 GS + KL WFDMDLS+KPY+VL+ H K + V++H+ YPLFAS SDD + V HGMVY+DL QNPLIVP+++LRGH GV+D FHP QPW+ ++GAD+ IRLY Sbjct: 621 GSYDSKLAWFDMDLSTKPYKVLRHHKKALRAVSYHKQYPLFASGSDDGSVIVCHGMVYNDLLQNPLIVPVKVLRGHAIHRDLGVLDVIFHPTQPWVFSSGADATIRLY 728
BLAST of GO242427 vs. ExPASy Swiss-Prot
Match: BOP1_MOUSE (Ribosome biogenesis protein BOP1 OS=Mus musculus GN=Bop1 PE=1 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 2.132e-32 Identity = 63/108 (58.33%), Postives = 82/108 (75.93%), Query Frame = 1 Query: 4 GSREGKLCWFDMDLSSKPYRVLKCHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHTSSNGRGVMDCKFHPRQPWLSTAGADSVIRLY 327 GS + KL WFD+DLS+KPY+VL+ H K + VAFH YPLFAS SDD + V HGMVY+DL QNPL+VP+++L+GHT + GV+D FHP QPW+ ++GAD IRL+ Sbjct: 624 GSYDSKLVWFDLDLSTKPYKVLRHHKKALRAVAFHPRYPLFASGSDDGSVIVCHGMVYNDLLQNPLLVPVKVLKGHTLTRDLGVLDVAFHPTQPWVFSSGADGTIRLF 731
BLAST of GO242427 vs. ExPASy Swiss-Prot
Match: BOP1_RAT (Ribosome biogenesis protein BOP1 OS=Rattus norvegicus GN=Bop1 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 6.203e-32 Identity = 62/108 (57.41%), Postives = 82/108 (75.93%), Query Frame = 1 Query: 4 GSREGKLCWFDMDLSSKPYRVLKCHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHTSSNGRGVMDCKFHPRQPWLSTAGADSVIRLY 327 GS + KL WFD+DLS+KPY+VL+ H K + VAFH YPLFAS SDD + V HGMVY+DL QNPL+VP+++L+GH+ + GV+D FHP QPW+ ++GAD IRL+ Sbjct: 623 GSYDSKLVWFDLDLSTKPYKVLRHHKKALRAVAFHPRYPLFASGSDDGSVIVCHGMVYNDLLQNPLLVPVKVLKGHSLTRDLGVLDVAFHPTQPWVFSSGADGTIRLF 730
BLAST of GO242427 vs. ExPASy Swiss-Prot
Match: BOP1_DANRE (Ribosome biogenesis protein bop1 OS=Danio rerio GN=bop1 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.058e-31 Identity = 61/108 (56.48%), Postives = 84/108 (77.78%), Query Frame = 1 Query: 4 GSREGKLCWFDMDLSSKPYRVLKCHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHTSSNGRGVMDCKFHPRQPWLSTAGADSVIRLY 327 GS + +L WFD+DLS+KPY+VL+ H K + +V+FH YPL AS SDD + V HGMVY+DL QNPLIVP+++L+GH+ ++ GV+D FHP QPW+ ++GAD+ IRLY Sbjct: 669 GSYDCRLAWFDLDLSTKPYKVLRHHKKALRSVSFHSHYPLLASGSDDGSVIVCHGMVYNDLLQNPLIVPVKVLKGHSITHDLGVLDVTFHPTQPWVFSSGADATIRLY 776
BLAST of GO242427 vs. ExPASy Swiss-Prot
Match: ERB1_CRYNE (Ribosome biogenesis protein ERB1 OS=Cryptococcus neoformans GN=ERB1 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.805e-31 Identity = 61/110 (55.45%), Postives = 84/110 (76.36%), Query Frame = 1 Query: 1 VGSREGKLCWFDMDLSSKPYRVLKCHPKDITNVAFHRSYPLFASCSDDCTAYVFHGMVYSDLNQNPLIVPLEILRGHTSSNGRGVMDCKFHPRQPWLSTAGADSVIRLYC 330 +GS + KL WFDMDLS+KPY+ L+ H + + +VA+H + PLFAS SDD T ++FH VY+DL QNPLIVPL+ILRGH +G GV+D ++ P +PWL ++GAD +RL+C Sbjct: 720 IGSYDKKLAWFDMDLSAKPYKTLRYHNRALRSVAYHPTLPLFASASDDGTVHIFHCTVYTDLMQNPLIVPLKILRGHKVIDGIGVLDLRWVPGKPWLVSSGADGEVRLWC 829 The following BLAST results are available for this feature:
BLAST of GO242427 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 63
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