GO241577
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of GO241577 vs. ExPASy Swiss-Prot
Match: RL18A_ORYSJ (60S ribosomal protein L18a OS=Oryza sativa subsp. japonica GN=RPL18A PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 5.204e-81 Identity = 127/138 (92.03%), Postives = 130/138 (94.20%), Query Frame = 3 Query: 84 MVTFRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKR 497 M FRFHQYQVVGR LPT +DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQ+LAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR PCIQIIKTAT+ KLCKR Sbjct: 1 MGAFRFHQYQVVGRGLPTPTDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQILAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVHFKLCKR 138 HSP 2 Score: 54.6842 bits (130), Expect = 5.204e-81 Identity = 23/33 (69.70%), Postives = 29/33 (87.88%), Query Frame = 1 Query: 493 REEATKQFHNSKIKFPLVFRKVRPPSRKLRTTY 591 + + TKQFH S IKFPLV+RKVRPP+RKL+TT+ Sbjct: 137 KRDNTKQFHKSDIKFPLVYRKVRPPTRKLKTTF 169
BLAST of GO241577 vs. ExPASy Swiss-Prot
Match: RL18A_CASSA (60S ribosomal protein L18a OS=Castanea sativa GN=RPL18A PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 2.658e-75 Identity = 137/149 (91.95%), Postives = 140/149 (93.96%), Query Frame = 3 Query: 84 MVTFRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRGSHQAVPQFKN 530 MVTFRFHQYQVVGR LP+E+DEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMY EMASRHRVR PCIQIIKTATIPAKLCKR S + QF N Sbjct: 1 MVTFRFHQYQVVGRGLPSETDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYIEMASRHRVRFPCIQIIKTATIPAKLCKRESSK---QFHN 146
BLAST of GO241577 vs. ExPASy Swiss-Prot
Match: R18A2_ARATH (60S ribosomal protein L18a-2 OS=Arabidopsis thaliana GN=RPL18AB PE=1 SV=2) HSP 1 Score: 270.396 bits (690), Expect = 4.692e-72 Identity = 131/149 (87.92%), Postives = 136/149 (91.28%), Query Frame = 3 Query: 84 MVTFRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRGSHQAVPQFKN 530 M FRFHQYQVVGRALPTE D PKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEI+EKNPT IKN+GIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVR PCIQIIKTAT+PAKLCKR ++ QF N Sbjct: 1 MGAFRFHQYQVVGRALPTEKDVQPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIYEKNPTTIKNFGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKR---ESTKQFHN 146
BLAST of GO241577 vs. ExPASy Swiss-Prot
Match: R18A3_ARATH (60S ribosomal protein L18a-3 OS=Arabidopsis thaliana GN=RPL18AC PE=2 SV=1) HSP 1 Score: 268.47 bits (685), Expect = 1.783e-71 Identity = 129/146 (88.36%), Postives = 133/146 (91.10%), Query Frame = 3 Query: 93 FRFHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRGSHQAVPQFKN 530 FRFHQYQVVGRALPTE+DEHPKIYRMKLW NEV AKSKFWYF+RKLKKVKKSNGQMLAINEIFEKNPT IKNYGIWLRYQSRTGYHNMYKEYRDTTLNG VEQMYTEMASRHRVR PCIQIIKTAT+PAKLCKR + QF N Sbjct: 4 FRFHQYQVVGRALPTENDEHPKIYRMKLWGRNEVCAKSKFWYFMRKLKKVKKSNGQMLAINEIFEKNPTTIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGGVEQMYTEMASRHRVRFPCIQIIKTATVPAKLCKR---EITKQFHN 146
BLAST of GO241577 vs. ExPASy Swiss-Prot
Match: RL18A_DICDI (60S ribosomal protein L18a OS=Dictyostelium discoideum GN=rpl18a PE=3 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 5.095e-44 Identity = 76/134 (56.72%), Postives = 98/134 (73.13%), Query Frame = 3 Query: 102 HQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRGS 503 H++QVVGR +PTE D +PKIYRM+L+A + AKS+FWYFL K+ K+KKS G++L + EIFE P K+KN+G+++RY SR+G HN+YKEYRD T GAV QMY EMASRH R I II I A L +R + Sbjct: 4 HEFQVVGRHVPTERDANPKIYRMRLFAQTSIHAKSRFWYFLSKIVKMKKSTGEILNVTEIFEDKPQKVKNFGVFIRYNSRSGTHNIYKEYRDLTRCGAVSQMYDEMASRHSARESSIHIIDIKEIAASLTRRAN 137 HSP 2 Score: 33.4982 bits (75), Expect = 5.095e-44 Identity = 16/29 (55.17%), Postives = 18/29 (62.07%), Query Frame = 1 Query: 484 SYAREEATKQFHNSKIKFPLVFRKVRPPS 570 S R TKQFH+SKIKFPL R + S Sbjct: 131 SLTRRANTKQFHDSKIKFPLTHRIAKSKS 159
BLAST of GO241577 vs. ExPASy Swiss-Prot
Match: RL18A_DROME (60S ribosomal protein L18a OS=Drosophila melanogaster GN=RpL18A PE=1 SV=1) HSP 1 Score: 160.614 bits (405), Expect = 7.191e-43 Identity = 70/131 (53.44%), Postives = 101/131 (77.10%), Query Frame = 3 Query: 105 QYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKR 497 +Y+VVGR LP+E + +Y+M+++A + + AKS+FWYFLR+LKK KK+ G++++I +++E +P KIKN+GIWLRY SR+G HNMY+EYRD T+ GAV Q Y +M +RHR R+ IQIIK +IPA +R Sbjct: 9 EYEVVGRKLPSEKEPQTPLYKMRIFAPDNIVAKSRFWYFLRQLKKFKKTTGEIVSIKQVYETSPVKIKNFGIWLRYDSRSGTHNMYREYRDLTVGGAVTQCYRDMGARHRARAHSIQIIKVDSIPAAKTRR 139 HSP 2 Score: 33.113 bits (74), Expect = 7.191e-43 Identity = 17/29 (58.62%), Postives = 19/29 (65.52%), Query Frame = 1 Query: 493 REEATKQFHNSKIKFPLVFRKVRPPSRKL 579 R KQFH+SKIKFPLV R +RKL Sbjct: 138 RRVHVKQFHDSKIKFPLVQRVHHKGNRKL 166
BLAST of GO241577 vs. ExPASy Swiss-Prot
Match: RL18A_CAEEL (60S ribosomal protein L18a OS=Caenorhabditis elegans GN=rpl-20 PE=2 SV=2) HSP 1 Score: 162.54 bits (410), Expect = 2.925e-41 Identity = 71/132 (53.79%), Postives = 103/132 (78.03%), Query Frame = 3 Query: 102 HQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKR 497 ++Y VVGR +PTE + I++M+++ATN V AKS+FWYF+ L++VKK+NG++L+I ++FEKNP +KNYG+WL+Y SRTG+HNMY+EYRDTT+ GAV Q Y +M +RHR ++ I I+K T+ A+ KR Sbjct: 11 NEYVVVGRKIPTEKEPVTPIWKMQIFATNHVIAKSRFWYFVSMLRRVKKANGEILSIKQVFEKNPGTVKNYGVWLKYDSRTGHHNMYREYRDTTVAGAVTQCYRDMGARHRAQADRIHILKVQTVKAEDTKR 142 HSP 2 Score: 25.7942 bits (55), Expect = 2.925e-41 Identity = 11/27 (40.74%), Postives = 17/27 (62.96%), Query Frame = 1 Query: 508 KQFHNSKIKFPLVFRKVRPPSRKLRTT 588 K FH++KI+FPL R + + + TT Sbjct: 146 KMFHDAKIRFPLPHRVTKRKNLSVFTT 172
BLAST of GO241577 vs. ExPASy Swiss-Prot
Match: RL18A_SPOFR (60S ribosomal protein L18a OS=Spodoptera frugiperda GN=RpL18A PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.284e-41 Identity = 76/142 (53.52%), Postives = 108/142 (76.06%), Query Frame = 3 Query: 105 QYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRGSHQAVPQFKN 530 +Y+V+GR LP+ES+ P +Y+M++++ +++ AKS+FWYFLR+LKK KK+ G++++I EI EK+P KIKN+GIWLRY+SR+G HNMY+EYRD ++ GAV Q Y +M +RHR R+ IQIIK I A C+R V QF N Sbjct: 9 EYEVIGRKLPSESEPKPPLYKMRIFSPDQIVAKSRFWYFLRQLKKFKKTTGEIVSIREIPEKSPVKIKNFGIWLRYESRSGVHNMYREYRDLSVGGAVTQCYRDMGARHRARAHSIQIIKVEVIKASACRR---PQVKQFHN 147
BLAST of GO241577 vs. ExPASy Swiss-Prot
Match: RL20_YEAST (60S ribosomal protein L20 OS=Saccharomyces cerevisiae GN=RPL20A PE=1 SV=2) HSP 1 Score: 160.999 bits (406), Expect = 4.009e-39 Identity = 72/126 (57.14%), Postives = 101/126 (80.16%), Query Frame = 3 Query: 99 FHQYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATI 476 F +YQV+GR LPTES PK++RM+++A+NEV AKS++WYFL+KL KVKK++G++++IN+I E +PTK+KN+G+W+RY SR+G HNMYKE RD + AVE +Y +MA+RHR R I I+K A I Sbjct: 4 FKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIVSINQINEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRSIHILKVAEI 129
BLAST of GO241577 vs. ExPASy Swiss-Prot
Match: RL18A_HUMAN (60S ribosomal protein L18a OS=Homo sapiens GN=RPL18A PE=1 SV=2) HSP 1 Score: 160.614 bits (405), Expect = 5.236e-39 Identity = 75/140 (53.57%), Postives = 102/140 (72.86%), Query Frame = 3 Query: 105 QYQVVGRALPTESDEHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQMLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVEQMYTEMASRHRVRSPCIQIIKTATIPAKLCKRGSHQAVPQF 524 +Y+VVGR LPT P +YRM+++A N V AKS+FWYF+ +LKK+KKS+G+++ ++FEK+P ++KN+GIWLRY SR+G HNMY+EYRD T GAV Q Y +M +RHR R+ IQI+K I A C+R AV QF Sbjct: 9 EYKVVGRCLPTPKCHTPPLYRMRIFAPNHVVAKSRFWYFVSQLKKMKKSSGEIVYCGQVFEKSPLRVKNFGIWLRYDSRSGTHNMYREYRDLTTAGAVTQCYRDMGARHRARAHSIQIMKVEEIAASKCRR---PAVKQF 145 The following BLAST results are available for this feature:
BLAST of GO241577 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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