EY715974

Overview
NameEY715974
Unique NameEY715974
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange fruit, development stadium (3 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP11_ARATH (Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1 PE=1 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.896e-54
Identity = 103/140 (73.57%), Postives = 114/140 (81.43%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            GANISGGHVNPAVTFGAF+GGNI+LLRGILYWIAQLLGS VACL+LKF T G    AF LS+GVG  NA VF+I+MTF L+YTVYAT +DPK GSLGTIAPIAIGFI GA+I  GGAF G S N   AF PA+ SW+W N
Sbjct:   76 GANISGGHVNPAVTFGAFIGGNITLLRGILYWIAQLLGSVVACLILKFATGGLAVPAFGLSAGVGVLNAFVFEIVMTFGLVYTVYATAIDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTN 215          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP12_ORYSJ (Probable aquaporin TIP1-2 OS=Oryza sativa subsp. japonica GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 205.297 bits (521), Expect = 3.737e-52
Identity = 98/140 (70.00%), Postives = 114/140 (81.43%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            GANISGGHVNPAVTFGAFVGGNISL++ ++YW+AQLLGS VACLLLK  T G    AF+LS+GVGAWNA+VF+I+MTF L+YTVYAT +DPKKG LG IAPIAIGFI GA+I  GGAFDG S N   +F PA+ +  W N
Sbjct:   76 GANISGGHVNPAVTFGAFVGGNISLVKAVVYWVAQLLGSVVACLLLKIATGGAAVGAFSLSAGVGAWNAVVFEIVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWDN 215          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP11_MAIZE (Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 204.527 bits (519), Expect = 6.375e-52
Identity = 100/138 (72.46%), Postives = 112/138 (81.16%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSW 458
            GANISGGHVNPAVTFGAFVGGNI+L RG+LYW+AQLLGSTVAC LL+F T GQ T  F L+ GV  W A+V +I+MTF L+YTVYAT +DPKKGSLGTIAPIAIGFI GA+I  GGAFDG S N   +F PAL SW W
Sbjct:   76 GANISGGHVNPAVTFGAFVGGNITLFRGLLYWVAQLLGSTVACFLLRFSTGGQATGTFGLT-GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWEW 212          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP11_ORYSJ (Probable aquaporin TIP1-1 OS=Oryza sativa subsp. japonica GN=TIP1-1 PE=2 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 8.326e-52
Identity = 101/140 (72.14%), Postives = 113/140 (80.71%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            GANISGGHVNPAVTFGAFVGGNI+L RG+LYWIAQLLGSTVAC LL+F T G  T  F L+ GV  W A+V +I+MTF L+YTVYAT +DPKKGSLGTIAPIAIGFI GA+I  GGAFDG S N   +F PAL SWSW +
Sbjct:   76 GANISGGHVNPAVTFGAFVGGNITLFRGLLYWIAQLLGSTVACFLLRFSTGGLATGTFGLT-GVSVWEALVLEIVMTFGLVYTVYATAVDPKKGSLGTIAPIAIGFIVGANILVGGAFDGASMNPAVSFGPALVSWSWES 214          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP12_ARATH (Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2 PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.420e-51
Identity = 99/140 (70.71%), Postives = 112/140 (80.00%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            GANISGGHVNPAVTFG  +GGNI+LLRGILYWIAQLLGS  AC LL F T G+   AF LS+GVG+ NA+VF+I+MTF L+YTVYAT +DPK GSLGTIAPIAIGFI GA+I  GGAF G S N   AF PA+ SW+W N
Sbjct:   77 GANISGGHVNPAVTFGVLLGGNITLLRGILYWIAQLLGSVAACFLLSFATGGEPIPAFGLSAGVGSLNALVFEIVMTFGLVYTVYATAVDPKNGSLGTIAPIAIGFIVGANILAGGAFSGASMNPAVAFGPAVVSWTWTN 216          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP13_ARATH (Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 4.132e-51
Identity = 97/140 (69.29%), Postives = 113/140 (80.71%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            GAN+SGGHVNPAVTFGAF+GGNI+LLR ILYWIAQLLG+ VACLLLK  T G  T+AF+LS GV  WNA+VF+I+MTF L+YTVYAT +DPKKG +G IAP+AIG I GA+I  GGAFDG S N   +F PA+ SW W N
Sbjct:   76 GANVSGGHVNPAVTFGAFIGGNITLLRAILYWIAQLLGAVVACLLLKVSTGGMETAAFSLSYGVTPWNAVVFEIVMTFGLVYTVYATAVDPKKGDIGIIAPLAIGLIVGANILVGGAFDGASMNPAVSFGPAVVSWIWTN 215          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP12_MAIZE (Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1)

HSP 1 Score: 197.978 bits (502), Expect = 5.967e-50
Identity = 96/140 (68.57%), Postives = 112/140 (80.00%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            GANISGGHVNPAVTFGAFVGGNISLL+ ++YW+AQLLGS VACLLLK  T G    AF+LS+GVGA NA+V +++MTF L+YTVYAT +DPKKG LG IAPIAIGFI GA+I  GGAFDG S N   +F PA+ +  W N
Sbjct:   76 GANISGGHVNPAVTFGAFVGGNISLLKALVYWVAQLLGSVVACLLLKIATGGAALGAFSLSAGVGAMNAVVLEMVMTFGLVYTVYATAVDPKKGDLGVIAPIAIGFIVGANILAGGAFDGASMNPAVSFGPAVVTGVWEN 215          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP1_MEDTR (Probable aquaporin TIP-type OS=Medicago truncatula GN=AQP1 PE=1 SV=1)

HSP 1 Score: 185.267 bits (469), Expect = 4.002e-46
Identity = 101/166 (60.84%), Postives = 118/166 (71.08%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHNSGPPESRQSVGEGQLASIKTLLISNS 542
            GANISGGHVNPAVTFGAFVGGNI+LLRGI+Y IAQLLGS VA  LL FVT   +  AF LS GVG   A+V +I+MTF L+YTVYAT +DPKKG++G IAPIAIGFI GA+I  GGAF G S N   +F PA+ SWSW N     +   +G G    +  +L  NS
Sbjct:   76 GANISGGHVNPAVTFGAFVGGNITLLRGIVYIIAQLLGSIVASALLVFVT-ASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFINS 240          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP1_MEDSA (Probable aquaporin TIP-type OS=Medicago sativa GN=MCP1 PE=2 SV=2)

HSP 1 Score: 177.178 bits (448), Expect = 1.090e-43
Identity = 99/166 (59.64%), Postives = 116/166 (69.88%), Query Frame = 3
Query:   45 GANISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHNSGPPESRQSVGEGQLASIKTLLISNS 542
            GANISGGHVNPAV FGAFVGGNI+LLRGI+Y IAQLLGS V   LL FVT   +  AF LS GVG   A+V +I+MTF L+YTVYAT +DPKKG++G IAPIAIGFI GA+I  GGAF G S N   +F PA+ SWSW N     +   +G G    +  +L  NS
Sbjct:   76 GANISGGHVNPAV-FGAFVGGNITLLRGIVYIIAQLLGSIVCSALLVFVT-ASSVPAFGLSEGVGVGPALVLEIVMTFGLVYTVYATAVDPKKGNIGIIAPIAIGFIVGANILVGGAFTGASMNPAVSFGPAVVSWSWSNHWVYWAGPLIGGGIAGLVYEVLFINS 239          
BLAST of EY715974 vs. ExPASy Swiss-Prot
Match: TIP31_ARATH (Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1 PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.859e-43
Identity = 83/138 (60.14%), Postives = 102/138 (73.91%), Query Frame = 3
Query:   51 NISGGHVNPAVTFGAFVGGNISLLRGILYWIAQLLGSTVACLLLKFVTNGQTTSAFALSSGVGAWNAIVFKILMTFRLLYTVYATTLDPKKGSLGTIAPIAIGFIEGASIFGGGAFDGTSRNRPPAFRPALGSWSWHN 464
            N+SGGHVNPAVTFGA VGG ++ +R I YWIAQLLG+ +ACLLL+  TNG     F L+SGVGA N +V +I++TF L+Y VY+T +DPK+GSLG IAP+AIG I GA+I  GG F G S N   AF PAL  W WH+
Sbjct:   86 NVSGGHVNPAVTFGALVGGRVTAIRAIYYWIAQLLGAILACLLLRLTTNGMRPVGFRLASGVGAVNGLVLEIILTFGLVYVVYSTLIDPKRGSLGIIAPLAIGLIVGANILVGGPFSGASMNPARAFGPALVGWRWHD 223          
The following BLAST results are available for this feature:
BLAST of EY715974 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
TIP11_ARATH8.896e-5473.57Aquaporin TIP1-1 OS=Arabidopsis thaliana GN=TIP1-1... [more]
TIP12_ORYSJ3.737e-5270.00Probable aquaporin TIP1-2 OS=Oryza sativa subsp. j... [more]
TIP11_MAIZE6.375e-5272.46Aquaporin TIP1-1 OS=Zea mays GN=TIP1-1 PE=2 SV=1[more]
TIP11_ORYSJ8.326e-5272.14Probable aquaporin TIP1-1 OS=Oryza sativa subsp. j... [more]
TIP12_ARATH1.420e-5170.71Aquaporin TIP1-2 OS=Arabidopsis thaliana GN=TIP1-2... [more]
TIP13_ARATH4.132e-5169.29Aquaporin TIP1-3 OS=Arabidopsis thaliana GN=TIP1-3... [more]
TIP12_MAIZE5.967e-5068.57Aquaporin TIP1-2 OS=Zea mays GN=TIP1-2 PE=2 SV=1[more]
TIP1_MEDTR4.002e-4660.84Probable aquaporin TIP-type OS=Medicago truncatula... [more]
TIP1_MEDSA1.090e-4359.64Probable aquaporin TIP-type OS=Medicago sativa GN=... [more]
TIP31_ARATH1.859e-4360.14Aquaporin TIP3-1 OS=Arabidopsis thaliana GN=TIP3-1... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-702-060-H09-CT.F Sweet orange fruit, development stadium (3 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY715974 ID=EY715974; Name=EY715974; organism=Citrus sinensis; type=EST; length=876bp
CCACGCGTCCGCACGCTTTCTTCCTTTTCGTTGCTGTCGCCGTTGGCGCC
AACATTTCCGGTGGCCACGTTAATCCTGCTGTCACCTTTGGCGCCTTCGT
TGGAGGTAACATCTCCCTTCTACGTGGCATCCTCTACTGGATCGCCCAGC
TTCTTGGATCCACCGTCGCATGCTTGCTTCTTAAGTTCGTTACCAACGGC
CAGACCACATCTGCTTTTGCTCTCTCATCTGGAGTTGGTGCATGGAACGC
AATCGTTTTCAAGATCTTGATGACATTCAGACTACTGTACACAGTGTATG
CCACAACCCTGGACCCAAAAAAGGGAAGCTTGGGGACAATTGCGCCAATT
GCAATTGGTTTCATTGAAGGAGCCAGCATCTTCGGGGGCGGGGCGTTTGA
TGGCACTTCACGGAACCGACCACCGGCATTCCGGCCCGCTTTGGGGAGCT
GGAGCTGGCACAACAGTGGGCCACCGGAGTCCCGCCAATCCGTCGGTGAG
GGGCAATTGGCCTCCATTAAAACGCTTCTTATTTCCAATTCTGTGGGTCT
CATCCACGCATAGACATAAGCTTAGTATAATCACTGTATGTTTTGTAACA
CAACCAGGAAAAGAACGAAACCGACGGGGGCACATCTCACTCGAACACGA
CGAAAGCACAAACAAATCAGAAAATAAGACACACGAGAACGGACAGAAAG
GAACACTGTCACAGAAGAACAAGAGTAATAGAGACTCGCCCGACCACTCC
GCCCACGCCCCCATCCCCCGGCCGCGACCTTTGTCGCTCCTTCATCCGCA
GACCATGAGACACGGCGCGAGCGGGGGCAAGGTGATGGACGGACAACCAC
TGATCCGATAAGCCCGCCCACACCGC
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