DY257117
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RK1_SPIOL (50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea GN=RPL1 PE=1 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 3.723e-55 Identity = 139/302 (46.03%), Postives = 170/302 (56.29%), Query Frame = 3 Query: 93 MATCGTTPSSLMLTYAATPLHPQDXXXXXXXXXXXXXXXAAFSLCTNLSVRGGERRASKWLDLYPLRQNKNGLPGHMLAAASAVQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXISTNPKKGKAALPLKRDRTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 MAT P SL L YA++ Q SLC L++ ER KW+D +Q+ + +LAA +A T PKKGKAALPLK DRTRSKRFLEIQ LRE K+EYDLKTA+SL+KQMSSTKF ETAEAHFRLNIDPKYNDQQLRATVSLPKGTGK+VK+AV AQG+K DEAK A AD+VGG++LIEQIK + + + + L PR PK G V P + ++FK+ KV++R + G+ Sbjct: 1 MATAA--PPSLSLCYASSSFQYQQDPSFQTHFKPLLLNS---SLC-RLTLNQRERSCLKWVDFTSQKQSPKSVSFRVLAAVAAEAEVADMEEEEGESGGVATLPSP-----------TKPKKGKAALPLKSDRTRSKRFLEIQKLREIKQEYDLKTALSLMKQMSSTKFVETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKTVKIAVLAQGDKIDEAKAAGADIVGGEELIEQIKGGFMDFDKLIATSDMMA-KVASLGRILGPRGLMPTPKAGTVTPNVAQAVEEFKKGKVEFRVDKTGI 284
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RK1_ARATH (50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana GN=RPL1 PE=1 SV=1) HSP 1 Score: 197.593 bits (501), Expect = 1.370e-49 Identity = 111/183 (60.66%), Postives = 131/183 (71.58%), Query Frame = 3 Query: 450 PKKGKAALPLKRDRTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 PKKGKAAL LKRDRTRSKRFLEIQ LRE KKEYD+ TAISLLKQ ++T+F E+ EAHFRLNIDPKYNDQQLRATVSLPKGTG++V VAV AQGEK DEAK+A AD+VG DDLIEQIK + + + K L PR PK G V P+ ++FK+ KV++R + G+ Sbjct: 97 PKKGKAALVLKRDRTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQLRATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASPDMMV-KVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGI 278
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RK1_PEA (50S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum GN=RPL1 PE=2 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 5.957e-45 Identity = 107/172 (62.21%), Postives = 119/172 (69.19%), Query Frame = 3 Query: 453 KKGKAALPLKRDRTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK----EKFLEPRDSCQIPKLGLVPPTYPRP*KKF 956 ++GK LK DR RSKRFLEIQ LRE KKEYDLKTAISL+K+ + TKF ET EAHFRLNIDPKYNDQQLRATVSLPKGTGK +KVAV QGE+FDEAKNA ADLVGG+DLIEQIK G + + L I PK K L PR PK G V P+ +F Sbjct: 42 RQGKLHWRLKSDRVRSKRFLEIQKLRELKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYNDQQLRATVSLPKGTGKPIKVAVLTQGERFDEAKNAGADLVGGEDLIEQIK---GGFMEFDKL--IASPDMMPKVASLGKILGPRGLMPNPKAGTVTANIPQAIAEF 208
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_CYAP8 (50S ribosomal protein L1 OS=Cyanothece sp. (strain PCC 8801) GN=rplA PE=3 SV=1) HSP 1 Score: 115.161 bits (287), Expect = 8.943e-25 Identity = 70/167 (41.92%), Postives = 96/167 (57.49%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 SKRF E + + Y A+ LLK+ ++ KF E+AEAH RL IDPKY DQQLR TVSLPKGTG+ V+VAV A+GEK EA NA AD+VG ++LIE+I + + + + + + L PR PK G V +FK K+++R + G+ Sbjct: 6 SKRFKEALAKVDQNQTYAPLEALQLLKETATAKFNESAEAHIRLGIDPKYTDQQLRTTVSLPKGTGQEVRVAVIARGEKVQEANNAGADIVGSEELIEEIFKGMMDFEVLIATPDMMP-KVAKLGRLLGPRGLMPSPKGGTVTADLTNAITEFKAGKLEFRADRTGI 171
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_MICAN (50S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) GN=rplA PE=3 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 1.168e-24 Identity = 74/170 (43.53%), Postives = 99/170 (58.24%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKF---LEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 S+R + Q E K Y+ A++LLK++++ KF ETAEAH RL IDPKY DQQLR TVSLPKGTG++V+VAV +GEK EA NA AD+VG ++LIE+I + G+ L P K L PR PK G V +FK K+++R + G+ Sbjct: 6 SRRLRDAQAKVENKA-YEPLEALTLLKELATAKFDETAEAHIRLGIDPKYTDQQLRTTVSLPKGTGRTVRVAVITRGEKVQEANNAGADIVGSEELIEEIAK---GMMDFEVLIATPD-MMPKVAKLGRQLGPRGLMPSPKGGTVTTDLTGAIAEFKAGKLEFRADRTGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RK1_CYAPA (50S ribosomal protein L1, cyanelle OS=Cyanophora paradoxa GN=rpl1 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 3.398e-24 Identity = 74/173 (42.77%), Postives = 101/173 (58.38%), Query Frame = 3 Query: 489 RTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKF---LEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 + RS+R E+ E ++ Y+ AI LLKQ+S+ KF ET E H RL IDPKYNDQQLRATV+LP GTG++++VAV +GEK +EA A ADLVG ++LI++I+ G +CL P K L PR PK G V + FK K+++R + G+ Sbjct: 2 KKRSRRMQELVGKVE-EQLYEPLEAIQLLKQISTAKFIETVEVHCRLGIDPKYNDQQLRATVTLPNGTGQTLRVAVITRGEKINEASTAGADLVGAEELIDEIQN---GRLDFDCLIATPD-MMPQVAKLGRVLGPRGLMPSPKGGTVTFDLAQAINDFKAGKLEFRNDRTGI 169
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_TRIEI (50S ribosomal protein L1 OS=Trichodesmium erythraeum (strain IMS101) GN=rplA PE=3 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 4.439e-24 Identity = 67/167 (40.12%), Postives = 100/167 (59.88%), Query Frame = 3 Query: 498 SKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 S+R E++ E ++ Y+ K A+ LLK+ ++ KF E AEAH RL IDPKY DQQLR TV+LPKGTG+++++AV A+GEK +EA A ADL G ++LIEQI + + + + + + L PR PK G V + +FK K+++R + G+ Sbjct: 6 SRRLQELRKKVE-ERPYEPKEALQLLKETATAKFLEAAEAHVRLGIDPKYTDQQLRTTVALPKGTGQTIRIAVIAKGEKVNEALAAGADLAGSEELIEQISKGMMEFDRLIATPDVMP-QVAKLGRLLGPRGLMPSPKGGTVTFDLTKAIDEFKAGKLEFRADRSGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_KOSOT (50S ribosomal protein L1 OS=Kosmotoga olearia (strain TBF 19.5.1) GN=rplA PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 5.797e-24 Identity = 68/164 (41.46%), Postives = 91/164 (55.49%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKEKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN 986 RSKR+LE + L + K Y + AI LLKQM S KF E+ E H + I+P +DQQ+R T+SLP GTGK+VKV V +GEK +EAK A AD VG D+LI+QI++ A + + L PR PK G V K FK +V+ + + Sbjct: 4 RSKRYLEARKLVDRTKAYTIDEAIELLKQMPSAKFDESIELHIKTGIEPSKSDQQVRGTISLPHGTGKNVKVLVFTRGEKVEEAKAAGADFVGSDELIQQIQKGWTDFDVAIATPDMMR-EIGRLGRILGPRGLMPSPKAGTVTTDVAEAVKAFKAGRVEIKND 166
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RK1_GRATL (50S ribosomal protein L1, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rpl1 PE=3 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 5.797e-24 Identity = 71/171 (41.52%), Postives = 98/171 (57.31%), Query Frame = 3 Query: 489 RTRSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPK-EKFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 + RS+RF + E K Y A++L+K +S+ KF ETAE H L +DPKY DQQLR TV LPKGTGK ++VAV Q K EAK++ AD+VGG+DLI++IK+ L + T + K K L P+ PK G V K+FK K++Y+ + G+ Sbjct: 2 KKRSRRFSTLLKQIEADKLYSPLDALNLMKNLSNVKFIETAEVHIVLGLDPKYADQQLRTTVMLPKGTGKIMRVAVITQNNKTHEAKSSGADIVGGEDLIDEIKK--GRLDFDKLIATPDMMMSIAKLGKILGPKGLMPSPKAGTVTHNLITTIKEFKAGKLEYKIDRSGI 170
BLAST of DY257117 vs. ExPASy Swiss-Prot
Match: RL1_DICT6 (50S ribosomal protein L1 OS=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) GN=rplA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 9.888e-24 Identity = 68/170 (40.00%), Postives = 97/170 (57.06%), Query Frame = 3 Query: 495 RSKRFLEIQNLREGKKEYDLKTAISLLKQMSSTKFTETAEAHFRLNIDPKYNDQQLRATVSLPKGTGKSVKVAVPAQGEKFDEAKNARADLVGGDDLIEQIKRRIPGLQQANCLHTING*RCPPKE--KFLEPRDSCQIPKLGLVPPTYPRP*KKFKREKVKYRQN*HGL 998 R KR+ ++ +L E K Y K A+SL+K++++ KF ET RL +DP++ DQQ+R TV LP GTGK KV V A+GEK EA+ A AD VGG+DL++QI+ A I G P K L PR PK G V + K++K +V++R + +G+ Sbjct: 4 RGKRYQQLLSLIEKGKLYSPKEAVSLVKKLATAKFDETINLAVRLGVDPRHADQQVRGTVVLPYGTGKEKKVLVFAEGEKAQEAREAGADYVGGEDLVKQIESGWLDFDVAIATPDIMGTLKIPSRLGKILGPRGLMPNPKTGTVTNDIAKAVKEYKAGRVEFRTDRYGI 173 The following BLAST results are available for this feature:
BLAST of DY257117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >DY257117 ID=DY257117; Name=DY257117; organism=Citrus sinensis; type=EST; length=1303bpback to top |