FC871125
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC871125 vs. ExPASy Swiss-Prot
Match: TBCD_MOUSE (Tubulin-specific chaperone D OS=Mus musculus GN=Tbcd PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.186e-15 Identity = 46/145 (31.72%), Postives = 79/145 (54.48%), Query Frame = 1 Query: 100 DRVIVPTLKTIESLFSKRIF--LNMEVHTPIFCAGVLDSLAVELKATKDFSKLYAGIAILGYIASVSDPISTRAFSYLLNFLGHRFPKIRKASAEQVYLVLLQNGNILEEDKTEKALEIIGETCWEGDMNVVKHQRLELYNLAGV 528 DRV V LK ++ L + F E + P FC +L E+K +KD KL + IA+L + + + + L LGH FP IRK++A QVY ++L ++++ + ++ + ++ +T W+ ++ VV+ QR L +L GV Sbjct: 1040 DRVSVSLLKMLDQLLANGCFDIFTAEENHP-FCVKLLTLCKEEIKKSKDIQKLRSSIAVLCGMVQFNGDVRKKILLQLFLLLGHPFPVIRKSTASQVYEMVLTYSDLVDAEVLDEVMSVLSDTAWDAELPVVREQRNRLCDLLGV 1183
BLAST of FC871125 vs. ExPASy Swiss-Prot
Match: TBCD_HUMAN (Tubulin-specific chaperone D OS=Homo sapiens GN=TBCD PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.155e-14 Identity = 49/146 (33.56%), Postives = 77/146 (52.74%), Query Frame = 1 Query: 100 DRVIVPTLKTIESLFSKR---IFLNMEVHTPIFCAGVLDSLAVELKATKDFSKLYAGIAILGYIASVSDPISTRAFSYLLNFLGHRFPKIRKASAEQVYLVLLQNGNILEEDKTEKALEIIGETCWEGDMNVVKHQRLELYNLAGV 528 +RV VP LKT++ + + IF E H F +L E+K +KD KL +GIA+ + + +A L L HRFP IRK +A QVY LL +++ D ++ + ++ +T W+ ++ VV+ QR L +L GV Sbjct: 1037 ERVSVPLLKTLDHVLTHGCFDIFTTEEDHP--FAVKLLALCKKEIKNSKDIQKLLSGIAVFCGMVQFPGDVRRQALLQLCLLLCHRFPLIRKTTASQVYETLLTYSDVVGADVLDEVVTVLSDTAWDAELAVVREQRNRLCDLLGV 1180
BLAST of FC871125 vs. ExPASy Swiss-Prot
Match: TBCD_BOVIN (Tubulin-specific chaperone D OS=Bos taurus GN=TBCD PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 9.154e-12 Identity = 46/146 (31.51%), Postives = 74/146 (50.68%), Query Frame = 1 Query: 100 DRVIVPTLKTIESLFSKR---IFLNMEVHTPIFCAGVLDSLAVELKATKDFSKLYAGIAILGYIASVSDPISTRAFSYLLNFLGHRFPKIRKASAEQVYLVLLQNGNILEEDKTEKALEIIGETCWEGDMNVVKHQRLELYNLAGV 528 DRV VP LKT++ + + IF E H FC +L E+K +KD KL + IA+ + + + L L H FP IRK +A QVY ++L +++ ++ + ++ T W+ ++ VV+ QR L +L GV Sbjct: 1045 DRVSVPLLKTLDQMLANGCFDIFTAQENHP--FCVKLLALCKEEIKKSKDVQKLRSSIAVFCGLVQFPGDVRRKVLLQLFLLLCHPFPVIRKNTASQVYEMVL-TYDVVPTAVLDEVMAVLSSTAWDAELPVVRAQRNRLCDLLGV 1187 The following BLAST results are available for this feature:
BLAST of FC871125 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC871125 ID=FC871125; Name=FC871125; organism=Citrus sinensis; type=EST; length=782bpback to top |