CX300823
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: AB32G_ARATH (ABC transporter G family member 32 OS=Arabidopsis thaliana GN=ABCG32 PE=1 SV=1) HSP 1 Score: 177.563 bits (449), Expect = 1.797e-44 Identity = 78/115 (67.83%), Postives = 97/115 (84.35%), Query Frame = 3 Query: 3 NVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 NVA+IIAAP YMLWNLFSGFMI +KRIP++WRWYYWANP+AW+LYGL SQ+GDD++ VKLSDG V VK LL+DV G++HDFL ++ MVVAF F+++FA+AIKAF FQ+R Sbjct: 1306 NVASIIAAPFYMLWNLFSGFMIPYKRIPLWWRWYYWANPVAWTLYGLLVSQYGDDERSVKLSDGIHQVMVKQLLEDVMGYKHDFLGVSAIMVVAFCVFFSLVFAFAIKAFNFQRR 1420
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: PDR6_ORYSJ (Pleiotropic drug resistance protein 6 OS=Oryza sativa subsp. japonica GN=PDR6 PE=2 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 4.012e-36 Identity = 68/114 (59.65%), Postives = 82/114 (71.93%), Query Frame = 3 Query: 6 VAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 VA IIAAP Y LWNLF GFMI KRIP +WRWYYWANP++W+LYGL TSQFGD D+ + L+DG + L+D FGFRHDFL + MV F +FA++FA AIK FQ+R Sbjct: 1337 VAPIIAAPFYTLWNLFCGFMIPRKRIPAWWRWYYWANPVSWTLYGLLTSQFGDLDQPLLLADGITTTTAVDFLRDHFGFRHDFLGVVAGMVAGFCVLFAVVFALAIKYLNFQRR 1450
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: PDR1_TOBAC (Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum GN=PDR1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 5.995e-32 Identity = 64/115 (55.65%), Postives = 84/115 (73.04%), Query Frame = 3 Query: 3 NVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 NVA+I+AA Y +WNLFSGF+I R+P++WRWYYWANP+AW+LYGL SQFGD KLSD + V+ L+ FGF+HDFL + A++ A+ +FA FA+AIKAF FQ+R Sbjct: 1325 NVASIVAAFFYGVWNLFSGFIIPRPRMPVWWRWYYWANPVAWTLYGLVASQFGDIQ--TKLSD---NETVEQFLRRYFGFKHDFLGVVAAVLTAYVFMFAFTFAFAIKAFNFQRR 1434
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: TUR2_SPIPO (Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza GN=TUR2 PE=1 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 5.075e-31 Identity = 61/115 (53.04%), Postives = 79/115 (68.70%), Query Frame = 3 Query: 3 NVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 ++AAI+AA Y +WN+F+GF+I RIPI+WRWYYWA P+AW+LYGL SQFG+ + D T VK L+ GFRHDFL + G MVV F +FA IFA++IK FQ+R Sbjct: 1331 DIAAIVAAAFYAIWNIFAGFIIPRPRIPIWWRWYYWACPVAWTLYGLVVSQFGEYTDTMSDVDET----VKDFLRRFLGFRHDFLPVVGVMVVVFTVLFASIFAFSIKTLNFQRR 1441
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: PDR1_NICPL (Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia GN=PDR1 PE=1 SV=1) HSP 1 Score: 131.724 bits (330), Expect = 1.131e-30 Identity = 63/116 (54.31%), Postives = 79/116 (68.10%), Query Frame = 3 Query: 3 NVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGD-DDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 NVA+I+A Y +WNLFSGF++ RIPI+WRWYYW PIAW+LYGL SQFGD D L + V+ L+ FGF+HDFL + A++VAFA +FA FA IKAF FQ+R Sbjct: 1326 NVASIVAGFFYTVWNLFSGFIVPRPRIPIWWRWYYWGCPIAWTLYGLVASQFGDLQDPLTDQNQ-----TVEQFLRSNFGFKHDFLGVVAAVIVAFAVVFAFTFALGIKAFNFQRR 1436
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: AB39G_ARATH (ABC transporter G family member 39 OS=Arabidopsis thaliana GN=ABCG39 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 1.929e-30 Identity = 59/114 (51.75%), Postives = 78/114 (68.42%), Query Frame = 3 Query: 6 VAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 +A I + LWNLFSGF+I +IPI+WRWYYWA P+AW+LYGL TSQ GD D +V +S G G + +K LLK+ FGF HDFL + + +A+ +F +FAY IK FQ+R Sbjct: 1342 IAGICMSFFLSLWNLFSGFLIPRPQIPIWWRWYYWATPVAWTLYGLITSQVGDKDSMVHIS-GIGDIDLKTLLKEGFGFEHDFLPVVAVVHIAWILLFLFVFAYGIKFLNFQRR 1454
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSJ (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica GN=PDR3 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.358e-28 Identity = 57/115 (49.57%), Postives = 80/115 (69.57%), Query Frame = 3 Query: 3 NVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 ++A+I+++ Y +WNLFSGF+I R+PI+WRWY WA P+AW+LYGL SQFGD + + DGT PVK +++ FGF+H +L +V AFA +FA +F +AI F FQKR Sbjct: 1348 HIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIE--TPMEDGT---PVKVFVENYFGFKHSWLGWVATVVAAFAFLFASLFGFAIMKFNFQKR 1457
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: PDR3_ORYSI (Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica GN=PDR3 PE=2 SV=1) HSP 1 Score: 124.02 bits (310), Expect = 2.358e-28 Identity = 57/115 (49.57%), Postives = 80/115 (69.57%), Query Frame = 3 Query: 3 NVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 ++A+I+++ Y +WNLFSGF+I R+PI+WRWY WA P+AW+LYGL SQFGD + + DGT PVK +++ FGF+H +L +V AFA +FA +F +AI F FQKR Sbjct: 1348 HIASIVSSAFYAIWNLFSGFVIPRPRVPIWWRWYCWACPVAWTLYGLVVSQFGDIE--TPMEDGT---PVKVFVENYFGFKHSWLGWVATVVAAFAFLFASLFGFAIMKFNFQKR 1457
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: AB34G_ARATH (ABC transporter G family member 34 OS=Arabidopsis thaliana GN=ABCG34 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.252e-28 Identity = 56/114 (49.12%), Postives = 77/114 (67.54%), Query Frame = 3 Query: 6 VAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 +A I + WNLFSGF+I +IPI+WRWYYWA+P+AW+LYG+ TSQ GD D +V ++ G G + +K LLK+ FGF +DFL + + +A+ IF FAY IK FQ+R Sbjct: 1341 IAGICLSFFLSFWNLFSGFLIPRPQIPIWWRWYYWASPVAWTLYGIITSQVGDRDSIVHIT-GVGDMSLKTLLKNGFGFDYDFLPVVAVVHIAWILIFLFAFAYGIKFLNFQRR 1453
BLAST of CX300823 vs. ExPASy Swiss-Prot
Match: PDR7_ORYSJ (Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica GN=PDR7 PE=3 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 6.860e-28 Identity = 56/115 (48.70%), Postives = 77/115 (66.96%), Query Frame = 3 Query: 3 NVAAIIAAPCYMLWNLFSGFMIAHKRIPIYWRWYYWANPIAWSLYGLQTSQFGDDDKLVKLSDGTGSVPVKHLLKDVFGFRHDFLVIAGAMVVAFATIFAMIFAYAIKAFKFQKR 347 ++AAI++ Y +WN+F+GF+I RIPI+WRWY WA P+AW+LYGL SQ+GD L DG V+ ++ FGFRHD+L VV FA +FA +FA++IK F FQ+R Sbjct: 1334 DIAAIVSTAFYCIWNIFAGFLIPRPRIPIWWRWYSWACPVAWTLYGLVASQYGDITNST-LEDGE---VVQDYIRRYFGFRHDYLGYVATAVVGFAALFAFVFAFSIKVFNFQRR 1444 The following BLAST results are available for this feature:
BLAST of CX300823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CX300823 ID=CX300823; Name=CX300823; organism=Citrus sinensis; type=EST; length=427bpback to top |