CN189745
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189745 vs. ExPASy Swiss-Prot
Match: TIF6B_ARATH (Protein TIFY 6B OS=Arabidopsis thaliana GN=TIFY6B PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 1.724e-24 Identity = 89/238 (37.39%), Postives = 129/238 (54.20%), Query Frame = 3 Query: 9 IVVKEEVNNDVCKEIGFSKGSAIQWPFSNKVSAVP-QFMSFKVAQEDKNKKILSDHLGSSG-FMPFS-AEAYEHNQRRGMAEVQKSFDLDRQGGTHISLTAYSVPHEVHSVHCSHDIKTFPVSNQ---AIPVSINNPVFKNQ-FATIGQNMGGANVKQQFLGGIPVTSPH-TVLPTIGSFGGVHESWNNIKTRGSP-QLTIFYAGTVNVFEDISPEKAQAIMLLAGNGSSIAPTMAQP 695 I VKEE + ++ ++G + W FSNKVSA QF+SF+ QED+++K + HL SG FMP S A+ Y+ ++ + VQ ++ FP SNQ VS++ P F++ +A G++ N Q L G+P+ +P ++LP GS G + ++ K GSP QLTIFYAG+V V++DISPEKA+AIMLLAGNGSS+ + P Sbjct: 15 ITVKEETSES-SRDSAPNRG--MNWSFSNKVSASSSQFLSFRPTQEDRHRKSGNYHLPHSGSFMPSSVADVYDSTRKAPYSSVQ-------------------------------GVRMFPNSNQHEETNAVSMSMPGFQSHHYAPGGRSFMNNNNNSQPLVGVPIMAPPISILPPPGSIVGTTDIRSSSKPIGSPAQLTIFYAGSVCVYDDISPEKAKAIMLLAGNGSSMPQVFSPP 218
BLAST of CN189745 vs. ExPASy Swiss-Prot
Match: TIF6A_ARATH (Protein TIFY 6A OS=Arabidopsis thaliana GN=TIFY6A PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.848e-19 Identity = 77/236 (32.63%), Postives = 107/236 (45.34%), Query Frame = 3 Query: 9 IVVKEEVNNDVCKEIGFSKGSAIQWPFSNKVSAVPQFMSFKVAQEDKNKKILSDHLGSSGFMPFSAEAYEHNQRRGMAEVQKSFDLDRQGGTHISLTAYSVPHEVHSVHCSHDIKTFPVSNQ----AIPVSINNPVFKNQFATIGQNMGGANVKQQFLGGIPVTSPHTVLPTIGSFGGVHESWNNIKTRGSP---QLTIFYAGTVNVFEDISPEKAQAIMLLAGNGSSIAPTMAQP 695 I VKEE N D G + W FS+KV + PQF+SF +Q++ ++DHL SS M + NQR + +Q+ + FP S+Q I VS++ P + N F + Q LGG P+ +P V + I++ P QLTIFYAG+V V++DI+PEKAQAIMLLAGNG P ++QP Sbjct: 15 ITVKEETNEDSAPSRGM-----MDWSFSSKVGSGPQFLSFGTSQQETRVNTVNDHLLSSAAM-------DQNQRTYFSSLQED-------------------------------RVFPGSSQQDQTTITVSMSEPNYINSF-----------INHQHLGGSPIMAPPV---------SVFPAPTTIRSSSKPLPPQLTIFYAGSVLVYQDIAPEKAQAIMLLAGNGPHAKP-VSQP 186 The following BLAST results are available for this feature:
BLAST of CN189745 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189745 ID=CN189745; Name=CN189745; organism=Citrus sinensis; type=EST; length=695bpback to top |