DR908804
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DR908804 vs. ExPASy Swiss-Prot
Match: SF3BB_ARATH (Uncharacterized protein At4g14342 OS=Arabidopsis thaliana GN=At4g14342 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.061e-41 Identity = 78/83 (93.98%), Postives = 82/83 (98.80%), Query Frame = 3 Query: 3 DRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESIGREHYNFMQKMLLPCGLPPEREDD 251 DRFNINSQLEHLQAKYVGTGHADL+RFEWAVNIQRDSYASYIGHYPML+YFAIAENESIGRE YNFMQKMLLPCGLPPERE++ Sbjct: 5 DRFNINSQLEHLQAKYVGTGHADLSRFEWAVNIQRDSYASYIGHYPMLSYFAIAENESIGRERYNFMQKMLLPCGLPPEREEE 87
BLAST of DR908804 vs. ExPASy Swiss-Prot
Match: SF3BA_ARATH (Uncharacterized protein At3g23325 OS=Arabidopsis thaliana GN=At3g23325 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.061e-41 Identity = 78/83 (93.98%), Postives = 81/83 (97.59%), Query Frame = 3 Query: 3 DRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESIGREHYNFMQKMLLPCGLPPEREDD 251 DRFNINSQLEHLQAKYVGTGHADL+RFEW VNIQRDSYASYIGHYPML+YFAIAENESIGRE YNFMQKMLLPCGLPPERED+ Sbjct: 5 DRFNINSQLEHLQAKYVGTGHADLSRFEWTVNIQRDSYASYIGHYPMLSYFAIAENESIGRERYNFMQKMLLPCGLPPEREDE 87
BLAST of DR908804 vs. ExPASy Swiss-Prot
Match: SF3B5_DROME (Probable splicing factor 3B subunit 5 OS=Drosophila melanogaster GN=CG11985 PE=1 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.381e-27 Identity = 53/83 (63.86%), Postives = 66/83 (79.52%), Query Frame = 3 Query: 3 DRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESIGREHYNFMQKMLLPCGLPPEREDD 251 +R+NI+SQLEHLQ+KY+GTGHAD +FEW N RDS ASY+GHY +L YFAIAENES R +N M++ML PCG PPE+ +D Sbjct: 3 ERYNIHSQLEHLQSKYIGTGHADTTKFEWLTNQHRDSLASYMGHYDILNYFAIAENESKARVRFNLMERMLQPCGPPPEKLED 85
BLAST of DR908804 vs. ExPASy Swiss-Prot
Match: SF3B5_HUMAN (Splicing factor 3B subunit 5 OS=Homo sapiens GN=SF3B5 PE=1 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.818e-25 Identity = 50/83 (60.24%), Postives = 65/83 (78.31%), Query Frame = 3 Query: 3 DRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESIGREHYNFMQKMLLPCGLPPEREDD 251 DR+ I+SQLEHLQ+KY+GTGHAD ++EW VN RDSY SY+GH+ +L YFAIAENES R +N M+KML PCG P ++ ++ Sbjct: 3 DRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESKARVRFNLMEKMLQPCGPPADKPEE 85
BLAST of DR908804 vs. ExPASy Swiss-Prot
Match: SF3B5_BOVIN (Splicing factor 3B subunit 5 OS=Bos taurus GN=SF3B5 PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 1.818e-25 Identity = 50/83 (60.24%), Postives = 65/83 (78.31%), Query Frame = 3 Query: 3 DRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESIGREHYNFMQKMLLPCGLPPEREDD 251 DR+ I+SQLEHLQ+KY+GTGHAD ++EW VN RDSY SY+GH+ +L YFAIAENES R +N M+KML PCG P ++ ++ Sbjct: 3 DRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESKARVRFNLMEKMLQPCGPPADKPEE 85
BLAST of DR908804 vs. ExPASy Swiss-Prot
Match: SF3B5_MOUSE (Splicing factor 3B subunit 5 OS=Mus musculus GN=Sf3b5 PE=2 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 2.625e-24 Identity = 49/83 (59.04%), Postives = 64/83 (77.11%), Query Frame = 3 Query: 3 DRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESIGREHYNFMQKMLLPCGLPPEREDD 251 DR+ I+SQLEHLQ+KY+GTGHAD ++EW VN RDSY SY+GH+ +L YFAIAENES R +N M+KML P G P ++ ++ Sbjct: 3 DRYTIHSQLEHLQSKYIGTGHADTTKWEWLVNQHRDSYCSYMGHFDLLNYFAIAENESKARVRFNLMEKMLQPSGPPADKPEE 85
BLAST of DR908804 vs. ExPASy Swiss-Prot
Match: SF3B5_DICDI (Splicing factor 3B subunit 5 OS=Dictyostelium discoideum GN=sf3b5 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 5.474e-22 Identity = 46/83 (55.42%), Postives = 63/83 (75.90%), Query Frame = 3 Query: 3 DRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESIGREHYNFMQKMLLPCGLPPEREDD 251 +R ++NSQLEHLQ +YVGTGHAD+++ EW N RDS +S+IGH L+ F+IAENES+GR YN + KM+ PCG P+ +D+ Sbjct: 3 ERESLNSQLEHLQMRYVGTGHADISKHEWLTNQHRDSLSSFIGHSSFLSLFSIAENESVGRVRYNTLTKMISPCGPAPKIKDN 85
BLAST of DR908804 vs. ExPASy Swiss-Prot
Match: YHV5_SCHPO (Uncharacterized protein C211.05 OS=Schizosaccharomyces pombe GN=SPBC211.05 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.106e-14 Identity = 36/78 (46.15%), Postives = 51/78 (65.38%), Query Frame = 3 Query: 3 DRFNINSQLEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPMLAYFAIAENESIGREHYNFMQKMLLPCGLPP 236 DR ++LE LQA+YVG G+A ++EW VN RD+ +S +GH P+LAY A A E + N ++KM++PCG PP Sbjct: 3 DRLRSQAKLEQLQARYVGVGNAFTTKYEWMVNQHRDTLSSVVGHPPLLAYMATALGEPRVQVRKNLLEKMIMPCGPPP 80 The following BLAST results are available for this feature:
BLAST of DR908804 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DR908804 ID=DR908804; Name=DR908804; organism=Citrus sinensis; type=EST; length=577bpback to top |