CN189603
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_ARATH (Homogentisate 1,2-dioxygenase OS=Arabidopsis thaliana GN=HGO PE=2 SV=2) HSP 1 Score: 274.633 bits (701), Expect = 3.541e-73 Identity = 125/142 (88.03%), Postives = 131/142 (92.25%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLI G YEAKADGFLPGGASLHSCMTPHGPDT TYEATIAR + P K+T TMAFMFES LIPR+C WALESPF+DHDYY+CWIGL+SHFS Sbjct: 300 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIYGAYEAKADGFLPGGASLHSCMTPHGPDTTTYEATIARVNAMAPSKLTGTMAFMFESALIPRVCHWALESPFLDHDYYQCWIGLKSHFS 441
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_ORYSJ (Homogentisate 1,2-dioxygenase OS=Oryza sativa subsp. japonica GN=HGO PE=2 SV=1) HSP 1 Score: 259.225 bits (661), Expect = 1.540e-68 Identity = 118/151 (78.15%), Postives = 132/151 (87.42%), Query Frame = -1 Query: 254 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFSYEEADNESD 706 DPS+NTVLTAPTDKPGVALLDFVIFPPRWLVAE+TFRPPYYHRNCMSEFMGLI G YEAKADGFLPGGASLHSCMTPHGPDTKTYEATI+R P +++ T+AFMFES LIPR+C WAL+SP D DYY+CWIGL+SHFS++ S+ Sbjct: 315 DPSVNTVLTAPTDKPGVALLDFVIFPPRWLVAENTFRPPYYHRNCMSEFMGLIYGIYEAKADGFLPGGASLHSCMTPHGPDTKTYEATISRPDANEPSRLSGTLAFMFESALIPRVCQWALDSPSRDLDYYQCWIGLKSHFSHDNGGATSE 465
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_DICDI (Homogentisate 1,2-dioxygenase OS=Dictyostelium discoideum GN=hgd PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 3.338e-47 Identity = 94/141 (66.67%), Postives = 111/141 (78.72%), Query Frame = -1 Query: 287 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITD-TMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSH 706 DPSI TVLTAPT++ GVA DFVIFPPRWLV E+TFRPPY+HRNCMSEFMGLIRG YEAK +GFLPGG SLHSCMTPHGPD+ T+ A I +E P KI D +AFMFES LI I +A ++ F+D DY++CW GL+ + Sbjct: 292 DPSIFTVLTAPTNEVGVAAADFVIFPPRWLVQENTFRPPYFHRNCMSEFMGLIRGVYEAKKEGFLPGGGSLHSCMTPHGPDSDTFYAAIK--AELKPTKIPDVALAFMFESSLILGISDYAKKN-FIDDDYWKCWQGLKDN 429
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_MOUSE (Homogentisate 1,2-dioxygenase OS=Mus musculus GN=Hgd PE=1 SV=1) HSP 1 Score: 182.185 bits (461), Expect = 2.392e-45 Identity = 91/144 (63.19%), Postives = 107/144 (74.31%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITD-TMAFMFESCLIPRICPWALES-PFMDHDYYRCWIGLRSHFS 706 DPSI TVLTA + +PGVA+ DFVIFPPRW VA+ TFRPPYYHRNCMSEFMGLI+G YEAK GFLPGG SLHS MTPHGPD +E A ++ P +I D TMAFMFES L + W L++ +D +YY+CW LRSHF+ Sbjct: 294 DPSIFTVLTAKSLRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIKGHYEAKQGGFLPGGGSLHSAMTPHGPDADCFEK--ASKAKLEPERIADGTMAFMFESSLSLAVTKWGLKTCSCLDENYYKCWEPLRSHFT 435
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PONAB (Homogentisate 1,2-dioxygenase OS=Pongo abelii GN=HGD PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.124e-45 Identity = 91/144 (63.19%), Postives = 107/144 (74.31%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITD-TMAFMFESCLIPRICPWALE-SPFMDHDYYRCWIGLRSHFS 706 DPSI TVLTA + +PGVA+ DFVIFPPRW VA+ TFRPPYYHRNCMSEFMGLIRG YEAK GFLPGG SLHS MTPHGPD +E A ++ P +I D TMAFMFES L + W L+ S +D +Y++CW L+SHF+ Sbjct: 294 DPSIFTVLTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDADCFEK--ASKAKLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFT 435
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_HUMAN (Homogentisate 1,2-dioxygenase OS=Homo sapiens GN=HGD PE=1 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 6.960e-45 Identity = 91/144 (63.19%), Postives = 106/144 (73.61%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITD-TMAFMFESCLIPRICPWALE-SPFMDHDYYRCWIGLRSHFS 706 DPSI TVLTA + +PGVA+ DFVIFPPRW VA+ TFRPPYYHRNCMSEFMGLIRG YEAK GFLPGG SLHS MTPHGPD +E A + P +I D TMAFMFES L + W L+ S +D +Y++CW L+SHF+ Sbjct: 294 DPSIFTVLTAKSVRPGVAIADFVIFPPRWGVADKTFRPPYYHRNCMSEFMGLIRGHYEAKQGGFLPGGGSLHSTMTPHGPDADCFEK--ASKVKLAPERIADGTMAFMFESSLSLAVTKWGLKASRCLDENYHKCWEPLKSHFT 435
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PSEF5 (Homogentisate 1,2-dioxygenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=hmgA PE=3 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 2.025e-44 Identity = 87/142 (61.27%), Postives = 108/142 (76.06%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLT+PT PG+A LDFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI+G Y+AKA+GFLPGGASLHSCM+ HGPD +T T A ++ P KI +TMAFMFE+ + R +ALE P + +DY CW L F+ Sbjct: 291 DPSIFTVLTSPTSVPGLANLDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIQGAYDAKAEGFLPGGASLHSCMSAHGPDGET--CTKAINAQLQPAKIDNTMAFMFETSQVLRPSQFALECPELQNDYDACWASLPVTFN 430
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PSEAE (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa GN=hmgA PE=3 SV=2) HSP 1 Score: 177.948 bits (450), Expect = 4.511e-44 Identity = 84/142 (59.15%), Postives = 109/142 (76.76%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLT+PT PG+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI+G Y+AKA GF+PGGASLHSCM+ HGPD ++ + IA ++ P++I TMAFMFE+ + R ALE+P + +DY CW L S F+ Sbjct: 289 DPSIFTVLTSPTSVPGLANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIQGAYDAKAGGFVPGGASLHSCMSAHGPDAESCDKAIA--ADLKPHRIDQTMAFMFETSQVLRPSRAALETPALQNDYDACWASLVSTFN 428
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_PSEA8 (Homogentisate 1,2-dioxygenase OS=Pseudomonas aeruginosa (strain LESB58) GN=hmgA PE=3 SV=1) HSP 1 Score: 177.948 bits (450), Expect = 4.511e-44 Identity = 84/142 (59.15%), Postives = 109/142 (76.76%), Query Frame = -1 Query: 281 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLRSHFS 706 DPSI TVLT+PT PG+A +DFVIFPPRW+VAE+TFRPP++HRN M+EFMGLI+G Y+AKA GF+PGGASLHSCM+ HGPD ++ + IA ++ P++I TMAFMFE+ + R ALE+P + +DY CW L S F+ Sbjct: 289 DPSIFTVLTSPTSVPGLANIDFVIFPPRWMVAENTFRPPWFHRNLMNEFMGLIQGAYDAKAGGFVPGGASLHSCMSAHGPDAESCDKAIA--ADLKPHRIDQTMAFMFETSQVLRPSRAALETPALQNDYDACWASLVSTFN 428
BLAST of CN189603 vs. ExPASy Swiss-Prot
Match: HGD_MYXXD (Homogentisate 1,2-dioxygenase OS=Myxococcus xanthus (strain DK 1622) GN=hmgA PE=3 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 7.695e-44 Identity = 82/138 (59.42%), Postives = 103/138 (74.64%), Query Frame = -1 Query: 293 DPSINTVLTAPTDKPGVALLDFVIFPPRWLVAEHTFRPPYYHRNCMSEFMGLIRGGYEAKADGFLPGGASLHSCMTPHGPDTKTYEATIARGSEAGPYKITDTMAFMFESCLIPRICPWALESPFMDHDYYRCWIGLR 706 DPSI TVLT+P++ PG A DFVIFPPRW+VAEHTFRPP++HRN MSEFMGL+ G Y+AKA GF PGG SLH+CM+ HGPD +YE I ++ P+KI DT+AFMFES + R +A+E+P + DY CW G + Sbjct: 297 DPSIFTVLTSPSEVPGTANCDFVIFPPRWMVAEHTFRPPWFHRNVMSEFMGLVHGVYDAKAGGFAPGGGSLHNCMSGHGPDRTSYEQAIQ--ADLKPHKIKDTLAFMFESRWVIRPTRFAMETPALQQDYDACWAGFQ 432 The following BLAST results are available for this feature:
BLAST of CN189603 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 83
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189603 ID=CN189603; Name=CN189603; organism=Citrus sinensis; type=EST; length=706bpback to top |