CN189478
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189478 vs. ExPASy Swiss-Prot
Match: AHM7_ARATH (Putative copper-transporting ATPase 3 OS=Arabidopsis thaliana GN=HMA5 PE=2 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 2.668e-48 Identity = 98/117 (83.76%), Postives = 102/117 (87.18%), Query Frame = 2 Query: 2 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXXKNYKRPKKLNNLEIREI 352 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNY+WALGYNL+GIPIAAG LFP T FRLPPWIAGAAMAA KNYKRPKKL++LEIREI Sbjct: 874 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYVWALGYNLMGIPIAAGVLFPGTRFRLPPWIAGAAMAASSVSVVCCSLLLKNYKRPKKLDHLEIREI 990
BLAST of CN189478 vs. ExPASy Swiss-Prot
Match: AHM5_ARATH (Copper-transporting ATPase RAN1 OS=Arabidopsis thaliana GN=RAN1 PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 1.571e-32 Identity = 69/114 (60.53%), Postives = 83/114 (72.81%), Query Frame = 2 Query: 2 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXXKNYKRPKKLNNLEI 343 L AADVGMAIGAGTD+AIEAAD VLM++NLEDVITAIDLSRKT +RIRLNY++A+ YN++ IPIAAG FP +LPPW AGA MA + YK+P+ L+I Sbjct: 885 LAAADVGMAIGAGTDVAIEAADYVLMRNNLEDVITAIDLSRKTLTRIRLNYVFAMAYNVVSIPIAAGVFFPVLRVQLPPWAAGACMALSSVSVVCSSLLLRRYKKPRLTTVLKI 998
BLAST of CN189478 vs. ExPASy Swiss-Prot
Match: ATP7A_RAT (Copper-transporting ATPase 1 OS=Rattus norvegicus GN=Atp7a PE=1 SV=1) HSP 1 Score: 112.849 bits (281), Expect = 5.413e-25 Identity = 60/115 (52.17%), Postives = 79/115 (68.70%), Query Frame = 2 Query: 2 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXXKNYKRPKKLNNLEIR 346 L A VG+AIG GTD+AIEAAD+VL++++L DV+ +IDLSRKT RIR+N+++AL YNL+GIPIAAG P G L PW+ AAMAA K Y++P +N E+R Sbjct: 1301 LAMASVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIDLSRKTVKRIRINFVFALIYNLIGIPIAAGVFLP-IGLVLQPWMGSAAMAASSVSVVLSSLFLKLYRKP-TYDNYELR 1413
BLAST of CN189478 vs. ExPASy Swiss-Prot
Match: ATP7A_MOUSE (Copper-transporting ATPase 1 OS=Mus musculus GN=Atp7a PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 1.575e-24 Identity = 57/106 (53.77%), Postives = 75/106 (70.75%), Query Frame = 2 Query: 2 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXXKNYKRP 319 L A+VG+AIG GTD+AIEAAD+VL++++L DV+ +IDLSRKT RIR+N+++AL YNL+GIPIAAG P G L PW+ AAMAA K Y++P Sbjct: 1300 LAMANVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIDLSRKTVKRIRINFVFALIYNLVGIPIAAGVFLP-IGLVLQPWMGSAAMAASSVSVVLSSLFLKLYRKP 1404
BLAST of CN189478 vs. ExPASy Swiss-Prot
Match: ATP7A_HUMAN (Copper-transporting ATPase 1 OS=Homo sapiens GN=ATP7A PE=1 SV=3) HSP 1 Score: 109.768 bits (273), Expect = 4.582e-24 Identity = 56/106 (52.83%), Postives = 75/106 (70.75%), Query Frame = 2 Query: 2 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXXKNYKRP 319 L A+VG+AIG GTD+AIEAAD+VL++++L DV+ +IDLSR+T RIR+N+++AL YNL+GIPIAAG P G L PW+ AAMAA K Y++P Sbjct: 1309 LAMANVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIDLSRETVKRIRINFVFALIYNLVGIPIAAGVFMP-IGLVLQPWMGSAAMAASSVSVVLSSLFLKLYRKP 1413
BLAST of CN189478 vs. ExPASy Swiss-Prot
Match: ATP7B_SHEEP (Copper-transporting ATPase 2 OS=Ovis aries GN=ATP7B PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.616e-23 Identity = 56/106 (52.83%), Postives = 72/106 (67.92%), Query Frame = 2 Query: 2 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXXKNYKRP 319 L ADVG+AIG GTD+AIEAAD+VL++++L DV+ +I LSR+T RIRLN + AL YNL+GIP+AAG P G L PW+ AAMAA K Y++P Sbjct: 1315 LAQADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSRRTVWRIRLNLVLALIYNLIGIPVAAGVFIP-IGVVLQPWMGSAAMAASSVSVVLSSLQLKCYRKP 1419
BLAST of CN189478 vs. ExPASy Swiss-Prot
Match: ATP7A_CRIGR (Copper-transporting ATPase 1 (Fragment) OS=Cricetulus griseus GN=ATP7A PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 6.616e-23 Identity = 56/115 (48.70%), Postives = 76/115 (66.09%), Query Frame = 2 Query: 2 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXXKNYKRPKKLNNLEIR 346 L A+VG+AIG GTD+ IEAAD+V ++++L DV+ +IDLSRKT RIR+N+++ L YNL+GIPIAAG P G PW+ AAMAA K Y++P +N E+R Sbjct: 1299 LAMANVGIAIGTGTDVTIEAADVVFIRNDLLDVVASIDLSRKTVKRIRINFLFPLIYNLVGIPIAAGVFLP-IGLVFQPWMGSAAMAASSVSVVLSSLFLKLYRKP-TYDNYELR 1411
BLAST of CN189478 vs. ExPASy Swiss-Prot
Match: ATP7B_HUMAN (Copper-transporting ATPase 2 OS=Homo sapiens GN=ATP7B PE=1 SV=4) HSP 1 Score: 105.145 bits (261), Expect = 1.129e-22 Identity = 55/106 (51.89%), Postives = 72/106 (67.92%), Query Frame = 2 Query: 2 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXXKNYKRP 319 L AD+G+AIG GTD+AIEAAD+VL++++L DV+ +I LS++T RIR+N + AL YNL+GIPIAAG P G L PW+ AAMAA K YK+P Sbjct: 1275 LAQADMGVAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRINLVLALIYNLVGIPIAAGVFMP-IGIVLQPWMGSAAMAASSVSVVLSSLQLKCYKKP 1379
BLAST of CN189478 vs. ExPASy Swiss-Prot
Match: ATP7B_MOUSE (Copper-transporting ATPase 2 OS=Mus musculus GN=Atp7b PE=1 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 2.514e-22 Identity = 54/106 (50.94%), Postives = 72/106 (67.92%), Query Frame = 2 Query: 2 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXXKNYKRP 319 L ADVG+AIG GTD+AIEAAD+VL++++L DV+ +I LS++T RIR+N + AL YN++GIPIAAG P G L PW+ AAMAA K Y++P Sbjct: 1272 LAQADVGIAIGTGTDVAIEAADVVLIRNDLLDVVASIHLSKRTVRRIRVNLVLALIYNMVGIPIAAGVFMP-IGIVLQPWMGSAAMAASSVSVVLSSLQLKCYRKP 1376
BLAST of CN189478 vs. ExPASy Swiss-Prot
Match: COPA_ARCFU (Probable copper-exporting P-type ATPase A OS=Archaeoglobus fulgidus GN=copA PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 6.193e-21 Identity = 52/127 (40.94%), Postives = 75/127 (59.06%), Query Frame = 2 Query: 2 LVAADVGMAIGAGTDIAIEAADIVLMKSNLEDVITAIDLSRKTFSRIRLNYIWALGYNLLGIPIAAGALFPTTGFRLPPWIAGAAMAAXXXXXXXXXXXXKNYKRPKKLNNLEIREICWKNSKSICY 382 L AD+G+A+G+G+D+A+E+ DIVL++ +L DV+ AI LSRKT S+I+ N WAL YN++ IP AAG L+P G P AG AMA +NY P + + +I + S C+ Sbjct: 626 LAQADLGIAVGSGSDVAVESGDIVLIRDDLRDVVAAIQLSRKTMSKIKQNIFWALIYNVILIPAAAGLLYPIFGVVFRPEFAGLAMAMSSVSVVANSLLLRNYVPPIRRGGDSVEKIVLELSGLSCH 752 The following BLAST results are available for this feature:
BLAST of CN189478 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 70
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189478 ID=CN189478; Name=CN189478; organism=Citrus sinensis; type=EST; length=403bpback to top |