CN189422
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y1192_THISH (UPF0061 protein Tgr7_1192 OS=Thioalkalivibrio sp. (strain HL-EbGR7) GN=Tgr7_1192 PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.842e-26 Identity = 74/163 (45.40%), Postives = 92/163 (56.44%), Query Frame = -3 Query: 256 KFMDEYQAIMTKKLGLPKYNKQ---IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 735 +F + A+M KLGL + ++ +I +LL MA VDYT FFRAL +P+ L+A D EA+ +W+ Y L G D R A M +VNPKYVLRNYL Q AI AE DF EV RL +L+ERP+DEQP ME YA LPP WA Sbjct: 332 QFASCWTALMGAKLGLLETRREDLDLIERLLGLMAGSAVDYTRFFRALGRFHDPAWLPD------LRAAFRD-----PEAFDAWLADYRARLGHEGREDAARLADMLAVNPKYVLRNYLAQMAIAKAEQKDFSEVERLQRLLERPFDEQPEMEAYAALPPDWA 483
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y9953_RHOBA (UPF0061 protein RB9953 OS=Rhodopirellula baltica GN=RB9953 PE=3 SV=1) HSP 1 Score: 112.079 bits (279), Expect = 3.474e-24 Identity = 66/182 (36.26%), Postives = 103/182 (56.59%), Query Frame = -3 Query: 244 KFMDEYQAIMTKKLGLPKYNKQ----IISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLL----------DIGKERKEAWISWVLSYIQELLSSG---ISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA-YRPG 735 +F + ++M KLGL KY + ++ LL + + + D T F+R L++++ E + + L AVL ++ +E ++A + W+ SY +L+ D +R+ MN+VNPKYVLRNYL Q AIDA + GD V LL+++ RPYD+QPG E++A P WA +RPG Sbjct: 353 EFQKSWHSMMAGKLGLSKYESETDDELVDSLLTLLQLAETDMTIFYRRLADIELGTR--EQPVTLELAAVLRHLSEAHYVADEVTEEYQQALMDWMRSYQSRVLADDGFPAEDSQRRQRMNAVNPKYVLRNYLAQLAIDACDKGDDSLVSELLEVLRRPYDDQPGKERFAEKRPEWARHRPG 532
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y444_PSEPF (UPF0061 protein Pfl01_0444 OS=Pseudomonas fluorescens (strain Pf0-1) GN=Pfl01_0444 PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 1.011e-23 Identity = 63/162 (38.89%), Postives = 92/162 (56.79%), Query Frame = -3 Query: 259 FMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEE-RKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 732 F Y +M ++LG ++ ++ +LL M VDYT FFR L A+ ++ L+ +DI + + +W Y+ + G +D+E R+A M++VNP Y+LRNYL Q AIDAAE GD+ EVRRL ++ P++EQPGME YA PP W Sbjct: 327 FQAHYLDLMRRRLGFTTAEDDDQMLLEQLLQLMQNSGVDYTLFFRRLGEESAEQAVAR------LRDDFVDI-----KGFDAWGERYVARVARDGATDQEQRRARMHAVNPLYILRNYLAQKAIDAAEQGDYSEVRRLHAVLSNPFEEQPGMESYAERPPEW 477
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y909_VIBPA (UPF0061 protein VP0909 OS=Vibrio parahaemolyticus GN=VP0909 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.320e-23 Identity = 61/165 (36.97%), Postives = 88/165 (53.33%), Query Frame = -3 Query: 259 KFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQ---ELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 735 + ++ +M KLGL + ++ + + + DYT FFRALSN+ P+ + + L I +E +AW+ L+ + + + IS E+R M NPKY+LRNYL Q AID AE GDF EV RL +++ PYD QP E YA+LPP W Sbjct: 324 RLSQQFSRLMRSKLGLKTKIAEDGRLFESMFELLNQNHTDYTRFFRALSNLDKQPA---------QEVIDLFIDREAAQAWLDLYLARCELEVDEIGEPISAEQRSEQMRQTNPKYILRNYLAQLAIDKAEEGDFSEVHRLAEILRHPYDSQPEFEAYAKLPPEW 479
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y485_PSE14 (UPF0061 protein PSPPH_0485 OS=Pseudomonas syringae pv. phaseolicola (strain 1448A / Race 6) GN=PSPPH_0485 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.841e-23 Identity = 67/166 (40.36%), Postives = 99/166 (59.64%), Query Frame = -3 Query: 259 FMDEYQA----IMTKKLGLP---KYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGI-SDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 732 F+ YQA +M ++LGL + ++Q++S+LL M VDYT FFR L + P E L L+ +DI + + W +Y+ + G +++ER+ M++VNP Y+LRNYL Q+AI AAE GD+ EVRRL +++ P+ EQPGME YA+ PP W Sbjct: 323 FLPLYQAHYLDLMRRRLGLTIAQEQDEQLVSQLLKLMQNSGVDYTLFFRRLGDQ------PAAEALRTLRDDFVDI-----KGFDGWAEAYLARIAGEGKGTEQERQTRMHAVNPLYILRNYLAQNAIAAAEKGDYAEVRRLHQVLCTPFTEQPGMEGYAQRPPDW 477
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y3881_PSEU5 (UPF0061 protein PST_3881 OS=Pseudomonas stutzeri (strain A1501) GN=PST_3881 PE=3 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 3.841e-23 Identity = 60/158 (37.97%), Postives = 88/158 (55.70%), Query Frame = -3 Query: 259 EYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 723 E+ +M ++LG + + ++I +LL M VDYT FFR L A+ ++ L+ +D+ + + +W Y G R+A M++VNPKY+LRNYL Q AI+AAE GD+ VR L ++ RP+DEQPGME+YA PP W Sbjct: 330 EWLDLMRRRLGFSQAEDGDAELIRRLLQLMQGSAVDYTRFFRELGERPAEQAVQR------LREDFIDL-----QGFDAWAADYCARSAREGGDPVARQARMHAVNPKYILRNYLAQQAIEAAEKGDYAPVRELHAVLSRPFDEQPGMERYAERPPEW 476
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y683_TOLAT (UPF0061 protein Tola_0683 OS=Tolumonas auensis (strain DSM 9187 / TA4) GN=Tola_0683 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.016e-23 Identity = 64/167 (38.32%), Postives = 98/167 (58.68%), Query Frame = -3 Query: 244 FMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA-YRPG 732 F E A++ KLG ++ + +++++L + + +VD T FFR L+ V D S P+ +L D+ + + A+ W+ +Y Q +LS G+ ER A MN VNP YVLRNYL Q IDAAE G++ + LL+++ +PY EQ G E YA+ P WA ++PG Sbjct: 348 FAQEMAAMLAAKLGWQQWLPEDSELVNRLFDLLQQAEVDMTLFFRRLALV--DVSAPDLTVLADA-FYRDDLFCQHQPAFTQWLTNYSQRVLSEGVLPAERAARMNQVNPVYVLRNYLAQQVIDAAEQGNYQPIAELLEVLRQPYTEQSGKEAYAQKRPDWARHKPG 511
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y1411_VIBHB (UPF0061 protein VIBHAR_01411 OS=Vibrio harveyi (strain ATCC BAA-1116 / BB120) GN=VIBHAR_01411 PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 5.016e-23 Identity = 62/170 (36.47%), Postives = 89/170 (52.35%), Query Frame = -3 Query: 259 GKIGTKFMDEYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQ---ELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 750 GK + ++ +M KLGL + ++ + + +K DYT FFR LSN+ ++ P + L I +E AW+ L+ + + +S + R M NPKY+LRNYL Q AID AE GDF EV RL +L++RPYDEQP + Y +LPP W Sbjct: 319 GKFEVRLSQKFSELMRAKLGLHTKVDEDGRLFEAMFELLNQNKADYTRFFRELSNL---------DVKSPQAVIDLFIDREAASAWVDLYLARCELEVDECGERVSAQTRCEKMRRTNPKYILRNYLAQIAIDKAEEGDFSEVNRLAELLKRPYDEQPEFDDYTKLPPEW 479
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y1574_AZOSB (UPF0061 protein azo1574 OS=Azoarcus sp. (strain BH72) GN=azo1574 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 6.552e-23 Identity = 66/162 (40.74%), Postives = 88/162 (54.32%), Query Frame = -3 Query: 256 EYQAIMTKKLGLPKY---NKQIISKLLNNMAVDKVDYTNFFRALSNV---KADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAWA 723 E +A+ KLGL + ++ L M +VD T FFRAL+ V K DP++ D K + E E + W+ Y G+ ++R+A MN+ NP+YV+RNYL Q AIDAAE GD+G VR LL +M RPYDEQP YA+ P WA Sbjct: 351 ESRAMTAAKLGLAALADADLPMVDALHGWMKRAEVDMTLFFRALAEVDLLKPDPALFLDAFYDDAKRL------ETAEEFSGWLRLYADRCRQEGLDADQRRARMNAANPRYVMRNYLAQQAIDAAEQGDYGPVRSLLDVMRRPYDEQPERAAYAQRRPDWA 506
BLAST of CN189422 vs. ExPASy Swiss-Prot
Match: Y6641_PSEAB (UPF0061 protein PA14_66410 OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=PA14_66410 PE=3 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 8.557e-23 Identity = 65/165 (39.39%), Postives = 95/165 (57.58%), Query Frame = -3 Query: 259 FMDEYQA----IMTKKLGL---PKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLDIGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDFGEVRRLLKLMERPYDEQPGMEKYARLPPAW 732 F+ YQA +M ++LGL + ++ ++ +LL M VDY+ FFR L PE L L+ +D +EA+ W +Y + + G E R+ M++VNP YVLRNYL Q AI+AAE GD+ EVR L +++ RP++EQPGME++ R PP W Sbjct: 323 FLPLYQAHYLDLMRRRLGLGVAAENDQALVQELLQRMQGSAVDYSLFFRRLGE-----ETPE-RALASLRDDFVD-----REAFDRWAEAYRRRVEEEGGDQESRRRRMHAVNPLYVLRNYLAQQAIEAAEQGDYTEVRLLHQVLSRPFEEQPGMERFTRRPPDW 476 The following BLAST results are available for this feature:
BLAST of CN189422 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 153
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Sequences
The
following sequences are available for this feature:
EST sequence >CN189422 ID=CN189422; Name=CN189422; organism=Citrus sinensis; type=EST; length=764bpback to top |