CN189418
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN189418 vs. ExPASy Swiss-Prot
Match: HSFA1_ORYSJ (Heat stress transcription factor A-1 OS=Oryza sativa subsp. japonica GN=HSFA1 PE=2 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.320e-23 Identity = 82/223 (36.77%), Postives = 121/223 (54.26%), Query Frame = 1 Query: 16 RHISGSNKKPRLPRQDEENTVGAYDSSIPN--GQIVKFQPSMNEAAKAMLHQIMKMNSPSRLEPTISNLSTFLIDN-IPSANALENGHSSSQISGVTLSEVPPNSGQSNMSTESRFH-VPSSAISEIQCSPCVSD--------SVKVNPTQEKSKHNSGNDTVLPNFPQLQGIASESTISIPDVNFVLSGNGNAENLDPTALDGTMSIDADAFSPDHDVDVSP 648 R I SNKK RLP+QD G+ DS + GQIVK+QP +NEAAKAML +I+K++S R E ++ N FL++N +P+ L++ SS++ SGVTL+EVP NSG ++T S + S++ +IQC P V D ++ P+ K+ D + FP LQ I +E + IP F + G +L P D ++ I+ D + D P Sbjct: 232 RRIVASNKKRRLPKQD-----GSLDSESASLDGQIVKYQPMINEAAKAMLRKILKLDSSHRFE-SMGNSDNFLLENYMPNGQGLDSS-SSTRNSGVTLAEVPANSGLPYVATSSGLSAICSTSTPQIQC-PVVLDNGIPKEVPNMSAVPSVPKAVAPGPTDINILEFPDLQDIVAEENVDIPGGGFEMPGPEGVFSL-PEEGDDSVPIETDEILYNDDTQKLP 445
BLAST of CN189418 vs. ExPASy Swiss-Prot
Match: HSF8_SOLPE (Heat shock factor protein HSF8 OS=Solanum peruvianum GN=HSF8 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.401e-20 Identity = 78/225 (34.67%), Postives = 118/225 (52.44%), Query Frame = 1 Query: 13 SRHISGSNKKPRLPRQDEENTVGAYDSSIP--NGQIVKFQPSMNEAAKAMLHQIMKMNSPSRLEPTISNLSTFLI-DNIPSANALENGHSSSQISGVTLSEVPPNSGQSNMSTESRFHVPS--SAISEIQ------CSPCVSDSVK-----VNPTQEKSKHNSGNDTVLPNFPQLQGIASESTISIPDVNFVLSGNGNAENLDPTALDGTMSIDADAFSPDHDVD 639 ++ I+ +KK R+ +QD E+ D S+ +GQIVK+QP +NEAAKAML ++ K++S RLE ++ +FLI D P +NA SS ++SGVTL EVPP SG+ ++T S S A SE+Q CS +++ + V S +D ++P QLQGI E+ + G +D A++G M +D + SP D+D Sbjct: 246 NKRIAEGSKKRRI-KQDIESQ----DPSVTPADGQIVKYQPGINEAAKAMLRELSKLDSSPRLENFSNSPESFLIGDGSPQSNA-----SSGRVSGVTLQEVPPTSGKPLLNTASAIAGQSLLPATSEMQSSHLGTCSEIINNQLSNIIPLVGGEDLHPGSLSASDMIMPELSQLQGILPENNTDV---------IGCDSFMDTIAVEGKMGLDIGSLSPGADID 451
BLAST of CN189418 vs. ExPASy Swiss-Prot
Match: HFA1B_ARATH (Heat stress transcription factor A-1b OS=Arabidopsis thaliana GN=HSFA1B PE=2 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.033e-19 Identity = 73/225 (32.44%), Postives = 117/225 (52.00%), Query Frame = 1 Query: 13 SRHISGSNKKPRLPRQDEENTVGAYDSSIPNGQIVKFQPSMNEAAKAMLHQIMKMNSPSRLEPTISNLSTFLIDNIPSANALENGHSSSQISGVTLSEVPPNSGQSNMSTESRFHVPSSAISEIQCSPCVSDSVKVNPTQEKSKHNSGNDTVLPNFPQ--LQGIASESTISIPDVNFVLSGNGNAENLDP--TALDGTMSIDADAFSPDHDVDVSP--DGIHKLP 669 +R I GSNKK RLP ++EN + + N QIV++QPS+NEAA+ ML Q + ++ R E +N +FL+ ++PS+ +++NG+ SS++SGVTL+E PN+ QS + VP ++++ H+ V PN Q QG A + S P+ + V + E DP LD + + DA SP+ + ++ +G+ KLP Sbjct: 222 NRQIPGSNKKRRLPVDEQENRGDNVANGL-NRQIVRYQPSINEAAQNMLRQFLNTSTSPRYESVSNNPDSFLLGDVPSSTSVDNGNPSSRVSGVTLAEFSPNTVQSATN-----QVPEASLA----------------------HHPQAGLVQPNIGQSPAQGAAPADSWS-PEFDLVGCETDSGECFDPIMAVLDES---EGDAISPEGEGKMNELLEGVPKLP 414
BLAST of CN189418 vs. ExPASy Swiss-Prot
Match: HSF8_SOLLC (Heat shock factor protein HSF8 OS=Solanum lycopersicum GN=HSF8 PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.248e-18 Identity = 76/227 (33.48%), Postives = 118/227 (51.98%), Query Frame = 1 Query: 13 SRHISGSNKKPRLPRQDEENTVGAYDSSIP--NGQIVKFQPSMNEAAKAMLHQIMKMNSPSRLEPTISNLSTFLI-DNIPSANALENGHSSSQISGVTLSEVPPNSGQSNMSTESRFHVPS--SAISEIQ------CSPCVSDSVK-----VNPTQEKSKHNSGNDTVLPNFPQLQGIASESTISIPDVNFVLSGNGNAENLDPTALDGTMSID--ADAFSPDHDVD 639 ++ I+ +KK R+ +QD E+ D S+ +GQIVK+QP +NEAAKAML ++ K++S RL+ ++ +FLI D P +NA SS ++SGVTL EVPP SG+ ++T S S A SE+Q CS +++ + V S +D ++P QLQGI E+ + G +D +A++G + +D SP D+D Sbjct: 244 NKRIAEGSKKRRI-KQDIESQ----DPSVTPADGQIVKYQPGINEAAKAMLRELSKLDSSPRLDNFSNSPESFLIGDGSPQSNA-----SSGRVSGVTLQEVPPTSGKPLLNTASAIAGQSLLPATSEMQSSHLGTCSEIINNQLSNIIPLVGGEDLHPGSLSASDMIMPELSQLQGILPENNTDV---------IGCDSFMDTSAVEGKVGLDIIGSCLSPGADID 451
BLAST of CN189418 vs. ExPASy Swiss-Prot
Match: HFA1E_ARATH (Heat stress transcription factor A-1e OS=Arabidopsis thaliana GN=HSFA1E PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.781e-15 Identity = 65/205 (31.71%), Postives = 104/205 (50.73%), Query Frame = 1 Query: 13 SRHISGSNKKPRLPRQDEENTVGAYDSSIPNGQIVKFQPSMNEAAKAMLHQIMKMNSPSRLEPTISNLSTFLIDNIPSANALENGHSSSQISGVTLSEVPPNSGQSNMSTESRFHVPSSAISEIQCSPCVSDSVKVNPTQEKSKHNSGNDTVLPNFPQLQGIASESTISIPDVNFVLSGNGNAENLDP--TALDGTMSIDADAFS 621 ++HIS SNKK RLP +D+ N+ G++ + + QIV++Q SMN+A ML QI +M++ E SN +FL+ ++P++N +NG SS+ VTL++V +S + ++H PC + N E + S D + P QG A+ + S + V N E LDP LDG + ++AD + Sbjct: 216 NQHISESNKKRRLPVEDQMNS-GSHGVNGLSRQIVRYQSSMNDATNTMLQQIQQMSNAPSHESLSSNNGSFLLGDVPNSNISDNGSSSNGSPEVTLADV--SSIPAGFYPAMKYH-----------EPC-----ETNQVMETNLPFSQGDLL----PPTQGAAASGSSS---SDLVGCETDNGECLDPIMAVLDGALELEADTLN 394
BLAST of CN189418 vs. ExPASy Swiss-Prot
Match: HFA1D_ARATH (Heat stress transcription factor A-1d OS=Arabidopsis thaliana GN=HSFA1D PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 5.181e-15 Identity = 72/215 (33.49%), Postives = 104/215 (48.37%), Query Frame = 1 Query: 13 SRHISGSNKKPRLPRQDEENTVGAYDSSIPNGQIVKFQPSMNEAAKAMLHQIMKMNSPSRLEPTISNLSTFLIDN-IPSANALENGHSSSQISGVTLSEVPPNSGQSNMSTESRFHVPSSAISEIQ-CSPCVSDSVKVNPTQEKSKH--NSGNDTVLPNFPQLQGIASESTISIPDVNFVLSG-NGNAENLDPTAL-DGTMSIDADAFSPDHDVD 639 +R IS ++KK R R + V DS+ P+GQIVK+QP M+E AKAM Q+MKM EP + FL+ N + E SS+Q+SG+TL E+P SEIQ SP + V+ E +++ S +D LP+F + E+ P +F+ G++ LDP L D ++S D D F D D+D Sbjct: 238 NRRISDTSKKRRFKR---DGIVRNNDSATPDGQIVKYQPPMHEQAKAMFKQLMKM------EPYKTGDDGFLLGNGTSTTEGTEMETSSNQVSGITLKEMP-------------------TASEIQSSSPIETTPENVSAASEATENCIPSPDDLTLPDFTHM---LPENNSEKPPESFMEPNLGGSSPLLDPDLLIDDSLSFDIDDFPMDSDID 421 The following BLAST results are available for this feature:
BLAST of CN189418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189418 ID=CN189418; Name=CN189418; organism=Citrus sinensis; type=EST; length=670bpback to top |