CN189360
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN189360 vs. ExPASy Swiss-Prot
Match: DHX8_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 5.244e-25 Identity = 62/110 (56.36%), Postives = 72/110 (65.45%), Query Frame = 3 Query: 273 LKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEMPDYFVRTLLTIIHAILPPXXXXXXXXXXXXXXXXXXXXXXXXLAIEDSRDKVKD 602 L KL + SLVS VC+ELETHLG +KVLAEFI +LGR+ ETVDEFD LKE GAEMPDYFVR+LLT IH I PP LAI+D++DKVK+ Sbjct: 6 LNKLNHLSLVSNVCNELETHLGSAEKVLAEFIIDLGRHSETVDEFDKNLKEAGAEMPDYFVRSLLTTIHGIYPP------KPKSEKKKEEGDDQKFKGLAIKDTKDKVKE 109
BLAST of CN189360 vs. ExPASy Swiss-Prot
Match: DHX8_MOUSE (ATP-dependent RNA helicase DHX8 OS=Mus musculus GN=Dhx8 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.164e-14 Identity = 39/80 (48.75%), Postives = 48/80 (60.00%), Query Frame = 3 Query: 255 PASDDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEMPDYFVRTLLTIIHAILPP 494 P + L KLEY SLVSKVC+EL+ HLG DK LAEF+ L T D F + L +NGAE D + LL +I + PP Sbjct: 16 PGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPP 95
BLAST of CN189360 vs. ExPASy Swiss-Prot
Match: DHX8_HUMAN (ATP-dependent RNA helicase DHX8 OS=Homo sapiens GN=DHX8 PE=1 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.164e-14 Identity = 39/80 (48.75%), Postives = 48/80 (60.00%), Query Frame = 3 Query: 255 PASDDGLKKLEYFSLVSKVCSELETHLGFGDKVLAEFITELGRNCETVDEFDSKLKENGAEMPDYFVRTLLTIIHAILPP 494 P + L KLEY SLVSKVC+EL+ HLG DK LAEF+ L T D F + L +NGAE D + LL +I + PP Sbjct: 16 PGPAEELAKLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKNTTFDTFKASLVKNGAEFTDSLISNLLRLIQTMRPP 95 The following BLAST results are available for this feature:
BLAST of CN189360 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CN189360 ID=CN189360; Name=CN189360; organism=Citrus sinensis; type=EST; length=651bpback to top |