CN189326

Overview
NameCN189326
Unique NameCN189326
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length723
Libraries
Library NameType
Washington Navel Orange Stored Fruit Rind cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2725 contig Csv1_Contig2725:1..723. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: APK1A_ARATH (Protein kinase APK1A, chloroplastic OS=Arabidopsis thaliana GN=APK1A PE=2 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.160e-18
Identity = 58/144 (40.28%), Postives = 84/144 (58.33%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKSGC----NAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID------EEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            DS   AK+++FGLAK G     + ++  ++GT GY APEYLA G ++TK DV+SFGVVLLEL+SG+ A+D      E   V WAK   +     +RK+ RV     +  L+D  SME       +++ CL  +   RP+M ++V
Sbjct:  212 DSEYNAKLSDFGLAKDGPIGDKSHVSTRVMGTHGYAAPEYLATGHLTTKSDVYSFGVVLLELLSGRRAVDKNRPSGERNLVEWAKPYLV----NKRKIFRV----IDNRLQDQYSMEEACKVATLSLRCLTTEIKLRPNMSEVV 347          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: NAK_ARATH (Probable serine/threonine-protein kinase NAK OS=Arabidopsis thaliana GN=NAK PE=2 SV=2)

HSP 1 Score: 89.7373 bits (221), Expect = 1.675e-17
Identity = 60/144 (41.67%), Postives = 82/144 (56.94%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKSGCNAITMHI----VGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID------EEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            DSN  AK+++FGLA+ G      H+    +GTQGY APEYLA G +S K DV+SFGVVLLEL+SG+ AID      E   V WA+         +R++ RV   MD   L+   S+   +    +A+ C+  D   RP+M +IV
Sbjct:  212 DSNYNAKLSDFGLARDGPMGDNSHVSTRVMGTQGYAAPEYLATGHLSVKSDVYSFGVVLLELLSGRRAIDKNQPVGEHNLVDWARP----YLTNKRRLLRV---MDP-RLQGQYSLTRALKIAVLALDCISIDAKSRPTMNEIV 347          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: APK1B_ARATH (Protein kinase APK1B, chloroplastic OS=Arabidopsis thaliana GN=APK1B PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.187e-17
Identity = 60/144 (41.67%), Postives = 84/144 (58.33%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKSGCNAITMH----IVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID------EEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            DS   AK+++FGLAK G      H    I+GT GY APEYLA G ++TK DV+S+GVVLLE++SG+ A+D      E+  V WA+    L  N +RK+ RV     +  L+D  SME       +A+ CL  +   RP+M ++V
Sbjct:  213 DSEYNAKLSDFGLAKDGPTGDKSHVSTRIMGTYGYAAPEYLATGHLTTKSDVYSYGVVLLEVLSGRRAVDKNRPPGEQKLVEWARP---LLAN-KRKLFRV----IDNRLQDQYSMEEACKVATLALRCLTFEIKLRPNMNEVV 348          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: APK2A_ARATH (Protein kinase 2A, chloroplastic OS=Arabidopsis thaliana GN=APK2A PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 3.159e-16
Identity = 53/144 (36.81%), Postives = 80/144 (55.56%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKSGCNAITMHI----VGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID------EEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D++  AK+++FGLAK+G      H+    +GT GY APEY+A G ++ K DV+SFGVVLLELISG+ A+D      E   V WA         ++RK+ R+     +  L      +   +A  +A+ CL+ D   RP M +++
Sbjct:  228 DADFNAKLSDFGLAKAGPTGDNTHVSTKVIGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELISGRRAMDNSNGGNEYSLVDWATP----YLGDKRKLFRIM----DTKLGGQYPQKGAFTAANLALQCLNPDAKLRPKMSEVL 363          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: TMK1_ARATH (Probable receptor protein kinase TMK1 OS=Arabidopsis thaliana GN=TMK1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.125e-16
Identity = 54/137 (39.42%), Postives = 80/137 (58.39%), Query Frame = -1
Query:  334 NMRAKIANFGL---AKSGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGK------VLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSM 717
            +MRAK+A+FGL   A  G  +I   I GT GY+APEY   G V+TK+DV+SFGV+L+ELI+G++++DE         V W K   I   N+E   K+    +D  +  D  ++ SV +   +A  C  ++P +RP M
Sbjct:  728 DMRAKVADFGLVRLAPEGKGSIETRIAGTFGYLAPEYAVTGRVTTKVDVYSFGVILMELITGRKSLDESQPEESIHLVSWFKRMYI---NKEASFKKA---IDTTIDLDEETLASVHTVAELAGHCCAREPYQRPDM 858          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: Y5487_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At5g48740 OS=Arabidopsis thaliana GN=At5g48740 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.190e-16
Identity = 55/144 (38.19%), Postives = 80/144 (55.56%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKSGCNAITMHIV----GTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGK------VLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D +M AK+++FGL+K    A   HI     GT GY+ PEY +   ++ K DV+SFGVVLLELI G+E +   G       VLWA+   +  G          E +D+I LK++    S+  A  IAI C+ +D S RPS+ +++
Sbjct:  741 DKDMNAKVSDFGLSKQFTKADASHITTVVKGTAGYLDPEYYSTLQLTEKSDVYSFGVVLLELICGREPLSHSGSPDSFNLVLWAR-PNLQAG--------AFEIVDDI-LKETFDPASMKKAASIAIRCVGRDASGRPSIAEVL 874          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: BIK1_ARATH (Serine/threonine-protein kinase BIK1 OS=Arabidopsis thaliana GN=BIK1 PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.190e-16
Identity = 53/146 (36.30%), Postives = 85/146 (58.22%), Query Frame = -1
Query:  316 DSNMRAKIANFGLAKSG----CNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID------EEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVYA 723
            D++  AK+++FGLA+ G     + ++  ++GT GY APEY++ G ++ + DV+SFGV+LLE++SGK A+D      EE  V WA+         +RKV  +   +D  L    +  E+V  A  +A+ CL  +P  RP+M  +V A
Sbjct:  211 DADYNAKLSDFGLARDGPMGDLSYVSTRVMGTYGYAAPEYMSSGHLNARSDVYSFGVLLLEILSGKRALDHNRPAKEENLVDWARP----YLTSKRKVLLI---VDNRLDTQYLPEEAVRMA-SVAVQCLSFEPKSRPTMDQVVRA 348          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: APK2B_ARATH (Protein kinase 2B, chloroplastic OS=Arabidopsis thaliana GN=APK2B PE=1 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 9.190e-16
Identity = 51/144 (35.42%), Postives = 80/144 (55.56%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKSGCNAITMHI----VGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAID------EEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            D+   +K+++FGLAK+G      H+    +GT GY APEY+A G ++ K DV+SFGVVLLEL+SG+ A+D      E+  V WA         ++RK+ R+     +  L      +   +A  +A+ CL+ D   RP M +++
Sbjct:  225 DAEFNSKLSDFGLAKAGPTGDKTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDKSKVGMEQSLVDWATP----YLGDKRKLFRIM----DTRLGGQYPQKGAYTAASLALQCLNPDAKLRPKMSEVL 360          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: CX32_ARATH (Probable serine/threonine-protein kinase Cx32, chloroplastic OS=Arabidopsis thaliana GN=At4g35600 PE=1 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 2.047e-15
Identity = 54/144 (37.50%), Postives = 78/144 (54.17%), Query Frame = -1
Query:  322 DSNMRAKIANFGLAKSGC----NAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISG------KEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMDEILLKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIV 723
            DSN  AK+++FGLAK G     + +T  I+GT GY APEY+A G +  K DVF+FGVVLLE+++G      K    +E  V W +        E     RVK+ MD+  +K   + +       I ++C+  DP  RP M ++V
Sbjct:  227 DSNYDAKLSDFGLAKLGPADEKSHVTTRIMGTYGYAAPEYMATGHLYVKSDVFAFGVVLLEIMTGLTAHNTKRPRGQESLVDWLR-------PELSNKHRVKQIMDK-GIKGQYTTKVATEMARITLSCIEPDPKNRPHMKEVV 362          
BLAST of CN189326 vs. ExPASy Swiss-Prot
Match: CRK37_ARATH (Cysteine-rich receptor-like protein kinase 37 OS=Arabidopsis thaliana GN=CRK37 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.047e-15
Identity = 57/148 (38.51%), Postives = 81/148 (54.73%), Query Frame = -1
Query:  319 DSNMRAKIANFGLAK----SGCNAITMHIVGTQGYIAPEYLADGVVSTKMDVFSFGVVLLELISGKEAIDEEGKVLWAKVEGILEGNEERKVKRVKEWMD----EIL-----LKDSISMESVMSAMGIAIACLHKDPSKRPSMVDIVY 723
            D+ M  K+A+FG+A+          T  +VGT GY+APEY   G  STK DV+SFGV+LLE+ISGK       K L  + E   E  EE      K W++    EI+       ++IS+  VM  + I + C+ +D SKRPS+  I++
Sbjct:  479 DAEMNPKVADFGMARLFDMDETRGQTSRVVGTYGYMAPEYATYGQFSTKSDVYSFGVMLLEMISGK-----SNKKLEKEEE---EEEEELPAFVWKRWIEGRFAEIIDPLAAPSNNISINEVMKLIHIGLLCVQEDISKRPSINSILF 618          
The following BLAST results are available for this feature:
BLAST of CN189326 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 116
Match NameE-valueIdentityDescription
APK1A_ARATH1.160e-1840.28Protein kinase APK1A, chloroplastic OS=Arabidopsis... [more]
NAK_ARATH1.675e-1741.67Probable serine/threonine-protein kinase NAK OS=Ar... [more]
APK1B_ARATH2.187e-1741.67Protein kinase APK1B, chloroplastic OS=Arabidopsis... [more]
APK2A_ARATH3.159e-1636.81Protein kinase 2A, chloroplastic OS=Arabidopsis th... [more]
TMK1_ARATH4.125e-1639.42Probable receptor protein kinase TMK1 OS=Arabidops... [more]
Y5487_ARATH9.190e-1638.19Probable LRR receptor-like serine/threonine-protei... [more]
BIK1_ARATH9.190e-1636.30Serine/threonine-protein kinase BIK1 OS=Arabidopsi... [more]
APK2B_ARATH9.190e-1635.42Protein kinase 2B, chloroplastic OS=Arabidopsis th... [more]
CX32_ARATH2.047e-1537.50Probable serine/threonine-protein kinase Cx32, chl... [more]
CRK37_ARATH2.047e-1538.51Cysteine-rich receptor-like protein kinase 37 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS06_0001K24_f Washington Navel Orange Stored Fruit Rind cDNA Library Citrus sinensis cDNA clone CS_WEc0001K24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN189326 ID=CN189326; Name=CN189326; organism=Citrus sinensis; type=EST; length=723bp
TTTTTTTTTTTTTTTGACACCAACCCAATCAAAGTTTTATTGGTCTAATT
GTGCTACGTTTGAATAAAACAAAAAACAAAAAGGGTGTTTCGTTCCTCGT
GATAAACAAATGAAAATCTTACACATTAAAAATAACTCTGAGAGCGTTTT
AAGTTCTAGAACAGCCCTGTTTTGGCTTTTAACCCGTATGCTTATTATTA
TTTACACCCTGCATAATTACTACCATAATATGATTCTGATTCATCTTGCC
GAAACCTGAGAGGATGATAATGCATCATCTGAAATGTCGGAAAGCAAGTC
ATCACTCTTGCTCAAAGCATACACAATATCGACCATACTTGGCCTTTTCG
AAGGATCTTTGTGCAGACACGCAATGGCAATTCCCATTGCACTCATCACA
CTCTCCATTGAGATTGAATCCTTCAAAAGAATCTCATCCATCCATTCCTT
CACTCTCTTTACTTTCCTCTCTTCATTTCCCTCCAGTATCCCTTCAACTT
TTGCCCACAAAACCTTCCCCTCTTCATCAATTGCTTCCTTGCCAGATATC
AGCTCAAGCAACACCACCCCAAAAGAGAACACATCCATTTTCGTCGATAC
TACCCCATCTGCTAAGTACTCTGGAGCAATGTAGCCTTGAGTTCCAACAA
TGTGCATTGTTATGGCATTGCAGCCAGATTTTGCTAATCCAAAGTTGGCA
ATTTTGGCTCTCATGTTTGAGTC
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