EY756867

Overview
NameEY756867
Unique NameEY756867
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1408 contig Csv1_Contig1408:1..846. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 4.244e-69
Identity = 130/206 (63.11%), Postives = 163/206 (79.13%), Query Frame = 3
Query:  234 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQIDSFGEKGHDEXQK-HMQSLMKGFEEGLSRIPR 848
            + K+K++RLFGRE+P+H + G GKPADIFLWRNKK+S GVLG AT  W+LFELLEY+L+TL  HISIL+LAVLFLWS+ASTFI+KSP  IP V +PE  VL+ AS LR EINR   VLR+IASGRDLKKFL VIAGLW+LS VG+ CNF+TL YI   LL T+PV+YEKYE ++D FGEK   E +K +++  +K   + +S+IP+
Sbjct:   40 SLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPK 245          
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 261.151 bits (666), Expect = 5.543e-69
Identity = 130/204 (63.73%), Postives = 160/204 (78.43%), Query Frame = 3
Query:  234 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQIDSFGEKGHDEXQKHMQSLMKGFEEGLSRIP 845
            + KSKV+RLFGRE+P+H VLG GKPADIF+W+NKK+S GVLGGATA WV+FEL+EYHL+TL+CH+ I+ LAVLFLWSNA+ FINKSPP+IP V +PE+ +L+ AS LR EINR  + LREIASGRDLKKFL  IAGLW+LSI+G   NF+TL YI   LL TVP+ Y+KYE ++D  GEK   E +K    L    E+ LS+IP
Sbjct:   65 SMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVL---DEKVLSKIP 265          
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 259.996 bits (663), Expect = 1.235e-68
Identity = 126/206 (61.17%), Postives = 157/206 (76.21%), Query Frame = 3
Query:  234 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQIDSFGEKGHDEXQKHMQSL-MKGFEEGLSRIPR 848
            +FKSK++RLFGREKP+H VLG GKPADIFLWRNKK+S GVLG  TA WVLFEL EYHL+  +CH +I +LA LFLWSNA TFI+KS P IP V +PE  +L+  S LR EINR L +LR IASG+D+KKF+ VIAGLW+LSI+G+  NF+TLFY    LL T+PV+YEKYE ++D++GEK   E +K    L  K   + +S+IPR
Sbjct:   44 SFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPR 249          
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 6.128e-68
Identity = 125/205 (60.98%), Postives = 161/205 (78.54%), Query Frame = 3
Query:  234 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQIDSFGEKGHDEXQKHMQSLMKGFEEGLSRIPR 848
            + KSKV+RLFGRE+P+H VLG GKPADIF+W++KK+S GV GGAT  WVLFEL+EYHL+TL+CH+ I++LAVLFLWSNA+ FI+KSPP+IP V +PE+ +L+ AS LR EINR ++ LREIASGRD+KKFL  IAGLW+LSI+G   +F+TL YI   LL TVP+ Y+KYE ++DS+GEK   E +K    L     +  S+IPR
Sbjct:   61 SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVL---DAKVFSKIPR 262          
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.783e-67
Identity = 130/247 (52.63%), Postives = 172/247 (69.64%), Query Frame = 3
Query:  108 MAEHAPEHESADKSLVEKITXXXXXXXXXXXXXXXXXXXXXX-AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQIDSFGEKGHDEXQKHMQSLMKGFEEGLSRIP 845
            MAE   +    ++SL+EKI+                       A K+K++R+FGREKP+H VLG GKPAD+FLWR+KK+S  VLG ATA+WVLFEL+EYHL++L+CHISIL+L  LFLWSNA T INK+ P+IP + +PE+  L  AS+LR E+N+A  +LR IA GRDLKKFL V+ GLW++S+VGNW NF+TL YI F +LHTVP++YEK+E ++D   EK   E QK     +   E+ LS+IP
Sbjct:    1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQK---QYVVFDEKVLSKIP 244          
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 4.855e-65
Identity = 120/204 (58.82%), Postives = 156/204 (76.47%), Query Frame = 3
Query:  234 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQIDSFGEKGHDEXQKHMQSLMKGFEEGLSRIP 845
            A K+K++RLFGREKP+H VLG G PAD+FLWR+KK+SA VLG ATA+WVLFEL+EYH ++LVCHI I +LA LFL SNA  F+NK+PP+IP + + E+  L   SALR E+N+A  +LR IA GRDLKKFL V+ GLW++S+VGNW NF+TL YI F +LHTVP++YEK+E ++D   EK   E +KH    M   E+ LS++P
Sbjct:   44 ALKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKH---YMVFDEKVLSKLP 244          
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.990e-51
Identity = 98/201 (48.76%), Postives = 137/201 (68.16%), Query Frame = 3
Query:  243 SKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQIDSFGEKGHDEXQKHMQSLMKGFEEGLSRIP 845
            S+  RLF R+KPIHHVLG GK AD+ LWRNKKISA VL GATA+WVLFE + +H ++LVC+  +L +   F+WSNAS F+N+S   +P + LP+ F  E   A+  E+NR L  L+++A   +LK+FL  + GLW+ ++VG+ CNF+T+ YI F   HT+PV+YE+YE ++D F +    +   H + L  GF   LSRIP
Sbjct:   40 SRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHYKKLDTGF---LSRIP 237          
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLG_ARATH (Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=2 SV=2)

HSP 1 Score: 200.29 bits (508), Expect = 1.161e-50
Identity = 99/199 (49.75%), Postives = 137/199 (68.84%), Query Frame = 3
Query:  249 VFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQIDSFGEKGHDEXQKHMQSLMKGFEEGLSRIP 845
            ++R+FGRE+PIH VLG GKPAD+ LWR+KK++ G+L   T +W+LF      L+T +C  SIL L + FLWSNA   +NKSP  +  + +PEK +L+ ASA+ +E+N A A LR IA  RD+K F+  + GLWL+S++GNW +F++L YI F L+HTVP++YEKYE +ID   EK   E +KH Q     F   LS+IP
Sbjct:   51 IYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEAKF---LSKIP 243          
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.626e-36
Identity = 80/202 (39.60%), Postives = 117/202 (57.92%), Query Frame = 3
Query:  246 KVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQIDSFGEKGHDEXQKHMQSLMKGFEEG-LSRIPR 848
            K  +LF R++ IH + G GK ADI LWR  KI+A ++ G + +W L E++EY+ ITL+CH S+ S+   F+WS AS F+N   P IP V L E    + A +     N+ L  L ++A GRD   F      L+++SI+G + NFV L +I F  + T+PV+YE YE  +D+   K      + M+ L K  +   LS+IPR
Sbjct:   19 KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGK----LMRKMKKLYKKVDTNVLSKIPR 216          
BLAST of EY756867 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 5.607e-29
Identity = 61/167 (36.53%), Postives = 99/167 (59.28%), Query Frame = 3
Query:  255 RLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVFGLLHTVPVIYEKYEGQI 755
            +LF R++ IH +LG G  AD+ LWR K +S G++    A W++FE   Y + TL+  + +L L++LFLWS +++ +N+  P +P   + E    E +  LR  +N+ L V  +IA  RD + +  V   L+LLS++G+  +F TL +    ++ TVP  YE+YE  I
Sbjct:    7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYEDYI 173          
The following BLAST results are available for this feature:
BLAST of EY756867 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
RTNLC_ARATH4.244e-6963.11Reticulon-like protein B3 OS=Arabidopsis thaliana ... [more]
RTNLA_ARATH5.543e-6963.73Reticulon-like protein B1 OS=Arabidopsis thaliana ... [more]
RTNLD_ARATH1.235e-6861.17Reticulon-like protein B4 OS=Arabidopsis thaliana ... [more]
RTNLB_ARATH6.128e-6860.98Reticulon-like protein B2 OS=Arabidopsis thaliana ... [more]
RTNLE_ARATH1.783e-6752.63Reticulon-like protein B5 OS=Arabidopsis thaliana ... [more]
RTNLF_ARATH4.855e-6558.82Reticulon-like protein B6 OS=Arabidopsis thaliana ... [more]
RTNLH_ARATH3.990e-5148.76Reticulon-like protein B8 OS=Arabidopsis thaliana ... [more]
RTNLG_ARATH1.161e-5049.75Reticulon-like protein B7 OS=Arabidopsis thaliana ... [more]
RTNLI_ARATH3.626e-3639.60Reticulon-like protein B9 OS=Arabidopsis thaliana ... [more]
RTNLL_ARATH5.607e-2936.53Reticulon-like protein B12 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-E10-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756867 ID=EY756867; Name=EY756867; organism=Citrus sinensis; type=EST; length=858bp
CCACGCGTCCGGCTCCTTGTTCCCACCGAGTCTCGCTCTCTCTCGTTCTA
GAGTCTAGTACATTTTTCAATTCATTTTCATCGGCGCTTACTCGGCGGCA
GAGATCTATGGCGGAACATGCACCTGAGCACGAATCAGCCGACAAATCAC
TGGTGGAGAAGATCACGGATAAGATCCATGGCCACGACTCCTCGTCATCT
GACTCCGATGACGACAAGCCGTCGTCTATTGACGCCTTTAAGTCCAAAGT
ATTCAGGCTCTTCGGAAGAGAAAAACCTATTCACCATGTCCTCGGAGCTG
GAAAACCTGCTGATATTTTCCTATGGAGGAACAAGAAAATCTCTGCTGGT
GTGCTAGGTGGAGCCACTGCAATGTGGGTTCTCTTTGAGTTGCTGGAATA
CCATTTAATCACTTTGGTCTGCCATATATCGATTCTCTCTCTGGCTGTTC
TCTTCCTGTGGTCCAATGCATCCACATTTATCAACAAATCACCGCCAGAG
ATTCCAGTTGTTACACTTCCTGAGAAGTTTGTCCTTGAATTCGCCTCTGC
CTTGAGGTATGAAATCAACCGAGCCTTGGCTGTCCTGCGGGAAATTGCGT
CTGGAAGGGACTTGAAGAAGTTTCTTGGTGTCATTGCTGGCTTGTGGCTT
TTGTCTATTGTCGGTAATTGGTGCAACTTCGTGACATTATTCTACATTGT
ATTTGGTTTGCTACACACCGTGCCCGTGATTTATGAGAAGTACGAGGGAC
AGATTGATTCATTTGGTGAGAAAGGGCACGATGAGATNCAGAAGCATATG
CAGTCTTTGATGAAAGGTTTTGAAGAAGGTTTGAGTCGAATTCCAAGGTG
CANTTGAG
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