EY756866

Overview
NameEY756866
Unique NameEY756866
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length877
Libraries
Library NameType
Sweet orange leaf, field plant Bcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY756866_ssr322 microsatellite EY756866_ssr322:322..333. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig1944 contig Csv1_Contig1944:58..940. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY756866 vs. ExPASy Swiss-Prot
Match: PSBQ2_ARATH (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Arabidopsis thaliana GN=PSBQ2 PE=1 SV=2)

HSP 1 Score: 265.774 bits (678), Expect = 2.343e-70
Identity = 144/226 (63.72%), Postives = 174/226 (76.99%), Query Frame = 2
Query:   71 GLRGSSHSQAVLEGSSQLSGPNRLNAPSNSRVAVA--RSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 742
            GLRG+S  QAVLEGS Q++G NRLN    SRV+V   R+G  +RAQQ  + PE+SRR++IGLVAAG+A GSFV+AV A+A PIKV            T NSD+ RD  L LK+RF+IQPLSP           K+I+NVK  IDKKAWPYVQNDLRLRASYLRYDLNT+ISAKPK+EKQSLK+LT KLFQTI NLD+AA+ KS+P+AEKYY+ETVS+LN+VL+K+G
Sbjct:   10 GLRGAS--QAVLEGSLQINGSNRLNI---SRVSVGSQRTGLVIRAQQNVSVPESSRRSVIGLVAAGLAGGSFVKAVFAEAIPIKVGGPPLPSGGLPGTDNSDQARDFSLALKDRFYIQPLSPTEAAARAKDSAKEIINVKSFIDKKAWPYVQNDLRLRASYLRYDLNTVISAKPKEEKQSLKDLTAKLFQTIDNLDYAARSKSSPDAEKYYSETVSSLNNVLAKLG 230          
BLAST of EY756866 vs. ExPASy Swiss-Prot
Match: PSBQ_SPIOL (Oxygen-evolving enhancer protein 3, chloroplastic OS=Spinacia oleracea GN=PSBQ PE=1 SV=1)

HSP 1 Score: 260.766 bits (665), Expect = 7.539e-69
Identity = 140/225 (62.22%), Postives = 167/225 (74.22%), Query Frame = 2
Query:   71 GLRGSSHSQAVLEGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPL-KERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 742
            GLRG+S  QAVLEGS Q+SG NRL+ P+ SRVAV + G  +RAQQ S E ETSRRAM+G VAAG+ASGSFV+AVLA+A PI V            T NSD+ RD  LP  K+RF++QPL P            +ILNVK+ ID+KAWP +QNDLRLRASYLRYDL T+ISAKPKDEK+SL+ LT KLF +I NLDHAAKIKS  EAEKYY +TVS +N+VL+K+G
Sbjct:   10 GLRGAS--QAVLEGSLQISGSNRLSGPTTSRVAVPKMGLNIRAQQVSAEAETSRRAMLGFVAAGLASGSFVKAVLAEARPIVVGPPPPLSGGLPGTENSDQARDGTLPYTKDRFYLQPLPPTEAAQRAKVSASEILNVKQFIDRKAWPSLQNDLRLRASYLRYDLKTVISAKPKDEKKSLQELTSKLFSSIDNLDHAAKIKSPTEAEKYYGQTVSNINEVLAKLG 232          
BLAST of EY756866 vs. ExPASy Swiss-Prot
Match: PSBQ1_ARATH (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Arabidopsis thaliana GN=PSBQ1 PE=1 SV=3)

HSP 1 Score: 241.121 bits (614), Expect = 6.181e-63
Identity = 141/226 (62.39%), Postives = 166/226 (73.45%), Query Frame = 2
Query:   71 GLRGSSHSQAVLEGSSQLSGPNRLNAPSNSRVAVA-RSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXX-TLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 742
            GL G+S   AVLEGS +++G +RLN   + RVAVA RS   VRAQQ+    ETSRR++IGLVAAG+A GSFVQAVLADA  IKV             T NSD+ RD  L LK+RF++QPL P           KDI+NVK LID+KAWPYVQNDLR +ASYLRYDLNTIIS+KPKDEK+SLK+LT KLF TI NLD+AAK KS  +AEKYYAETVS LN+VL+K+G
Sbjct:    6 GLHGAS--PAVLEGSLKINGSSRLNG--SGRVAVAQRSRLVVRAQQSE---ETSRRSVIGLVAAGLAGGSFVQAVLADAISIKVGPPPAPSGGLPAGTDNSDQARDFALALKDRFYLQPLPPTEAAARAKESAKDIINVKPLIDRKAWPYVQNDLRSKASYLRYDLNTIISSKPKDEKKSLKDLTTKLFDTIDNLDYAAKKKSPSQAEKYYAETVSALNEVLAKLG 224          
BLAST of EY756866 vs. ExPASy Swiss-Prot
Match: PSBQ_ONOVI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Onobrychis viciifolia GN=PSBQ PE=2 SV=1)

HSP 1 Score: 224.942 bits (572), Expect = 4.584e-58
Identity = 131/228 (57.46%), Postives = 159/228 (69.74%), Query Frame = 2
Query:   92 SQAVLEGSSQL-SGPNRLNAPSNSRVAVARSGFTVRAQQ---------ASNEPETSRRAMIGLVAAGVASGSFVQAVLADATPIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLK-NLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 742
            +  +LEGS QL SG NR  + S+SR       F VRAQQ         ++ +P+++RRAM+GLVA G+AS SFVQAVLA+A PIKV            TLNSDE RDL LPLKERF+IQPLSP           K+I+ VK+ ID+K      NDLRLRASYLRYDLNT+IS+KPK++KQSLK +  GKLFQ I NLD+AAK+KS P+AEKYYA+ VSTLNDVLSK+G
Sbjct:    6 ASGLLEGSLQLMSGSNR--SSSSSRTRGPAGVFIVRAQQQEQQQGMSSSAADPQSNRRAMLGLVATGLASASFVQAVLAEAKPIKVGGPPPPSGGLGGTLNSDEARDLKLPLKERFYIQPLSPTEAAQRQRESAKEIVAVKKFIDQKLGHMFINDLRLRASYLRYDLNTVISSKPKEQKQSLKESSAGKLFQDIDNLDYAAKLKSAPQAEKYYADAVSTLNDVLSKIG 231          
BLAST of EY756866 vs. ExPASy Swiss-Prot
Match: PSBQ1_MAIZE (Oxygen-evolving enhancer protein 3-1, chloroplastic OS=Zea mays GN=PSBQ1 PE=2 SV=1)

HSP 1 Score: 210.69 bits (535), Expect = 8.946e-54
Identity = 119/221 (53.85%), Postives = 146/221 (66.06%), Query Frame = 2
Query:   86 SHSQAVLEGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNE-PETSRRAMIGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 742
            + + A + G SQ   P+R  A S +R AV      VRA    +   +  RRA+IGLVA G+  G+  QA  A+    IK+            TLNSD+ RD DLPLKERF++QPL P           +DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK+EK+SLK LTGKLF TI +LDHAAKIKSTPEAEKY+A T   L DVL+K+G
Sbjct:    2 AQAMASMTGLSQGVLPSR-RADSRTRTAVV----IVRASAEGDAVAQAGRRAVIGLVATGIVGGALSQAARAETVKTIKIGAPPPPSGGLPGTLNSDQARDFDLPLKERFYLQPLPPAEAAARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKIKSTPEAEKYFAATKDALGDVLAKLG 217          
BLAST of EY756866 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSJ (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. japonica GN=Os07g0544800 PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 1.168e-53
Identity = 115/213 (53.99%), Postives = 145/213 (68.08%), Query Frame = 2
Query:  107 EGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 742
            +G    +GP R  A   SR+AV      VRA  A+ + +T RRA++GLVA G+A G+  QA LA+A  PIK+            TLNSD+ RD DLPL+ERF++QPL P           +DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPKDEK+ LK+LTGKLF TI  LDHAAKIKS  EAEKYY  T S L DVL+K+G
Sbjct:   13 QGVQLPAGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217          
BLAST of EY756866 vs. ExPASy Swiss-Prot
Match: PSBQ_ORYSI (Oxygen-evolving enhancer protein 3, chloroplastic OS=Oryza sativa subsp. indica GN=OsI_025465 PE=1 SV=2)

HSP 1 Score: 210.305 bits (534), Expect = 1.168e-53
Identity = 115/213 (53.99%), Postives = 145/213 (68.08%), Query Frame = 2
Query:  107 EGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADAT-PIKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 742
            +G    +GP R  A   SR+AV      VRA  A+ + +T RRA++GLVA G+A G+  QA LA+A  PIK+            TLNSD+ RD DLPL+ERF++QPL P           +DI+N+K LI+KK WP+V++DLRLRASYLRYDL T+I++KPKDEK+ LK+LTGKLF TI  LDHAAKIKS  EAEKYY  T S L DVL+K+G
Sbjct:   13 QGVQLPAGPRR--AGGRSRLAV------VRADAAAADVQTGRRAVLGLVATGIAGGALAQAALAEAAKPIKLGPPPPPSGGLPGTLNSDQARDTDLPLRERFYLQPLPPAEAAARAKESAQDIINLKPLIEKKQWPFVRDDLRLRASYLRYDLKTVINSKPKDEKKGLKDLTGKLFATIDGLDHAAKIKSPEEAEKYYTLTKSALGDVLAKLG 217          
BLAST of EY756866 vs. ExPASy Swiss-Prot
Match: PSBQ2_MAIZE (Oxygen-evolving enhancer protein 3-2, chloroplastic OS=Zea mays GN=PSBQ2 PE=3 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.251e-47
Identity = 107/220 (48.64%), Postives = 138/220 (62.73%), Query Frame = 2
Query:   86 SHSQAVLEGSSQLSGPNRLNAPSNSRVAVARSGFTVRAQQASNEPETSRRAMIGLVAAGVASGSFVQAVLADATP-IKVXXXXXXXXXXXXTLNSDEPRDLDLPLKERFFIQPLSPXXXXXXXXXXXKDILNVKELIDKKAWPYVQNDLRLRASYLRYDLNTIISAKPKDEKQSLKNLTGKLFQTIGNLDHAAKIKSTPEAEKYYAETVSTLNDVLSKVG 742
            + + A + G SQ   P   ++ + + V V R+  +    + +  P   R      + A  +S    QAV A+    IK+            TLNSD+ RD DLPLKERF++QPL P           +DI+N+K LIDKKAWPYVQNDLRLRASYLRYDL T+I++KPK+EK+SLK LTGKLF TI +LDHAAK+KSTPEAEKY+A T   L DVL+K+G
Sbjct:    2 AQAMASMTGLSQGVCPAAADSRTRTAVVVVRA--SAEGDRCAGGPRCDR------LVATASSPPLSQAVHAETVKTIKIGAPPPPSGGLPGTLNSDQTRDFDLPLKERFYLQPLPPAEAVARVKTSAQDIINLKPLIDKKAWPYVQNDLRLRASYLRYDLKTVIASKPKEEKKSLKELTGKLFSTIDDLDHAAKMKSTPEAEKYFAATKDALGDVLAKLG 213          
The following BLAST results are available for this feature:
BLAST of EY756866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
PSBQ2_ARATH2.343e-7063.72Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
PSBQ_SPIOL7.539e-6962.22Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ1_ARATH6.181e-6362.39Oxygen-evolving enhancer protein 3-1, chloroplasti... [more]
PSBQ_ONOVI4.584e-5857.46Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ1_MAIZE8.946e-5453.85Oxygen-evolving enhancer protein 3-1, chloroplasti... [more]
PSBQ_ORYSJ1.168e-5353.99Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ_ORYSI1.168e-5353.99Oxygen-evolving enhancer protein 3, chloroplastic ... [more]
PSBQ2_MAIZE1.251e-4748.64Oxygen-evolving enhancer protein 3-2, chloroplasti... [more]
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Properties
Property NameValue
Genbank descriptionCS13-C1-001-014-E09-CT.F Sweet orange leaf, field plant B Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY756866 ID=EY756866; Name=EY756866; organism=Citrus sinensis; type=EST; length=877bp
CCACGCGTCCGAGCAAAGTTTCTGAAACCTGATTTAGTGAAAAATGGCAC
AAGCTATGGCGTCAATGGCTGGCTTACGTGGATCCTCCCACTCGCAGGCT
GTTCTTGAAGGTAGCTCCCAGCTCAGTGGCCCAAACCGCTTGAACGCCCC
TAGCAACAGCAGAGTTGCTGTGGCTCGCTCTGGTTTCACTGTTAGAGCCC
AGCAGGCATCAAACGAGCCTGAAACTAGCCGCCGTGCTATGATTGGTCTT
GTTGCTGCAGGTGTGGCCTCAGGTTCCTTTGTTCAAGCTGTACTTGCTGA
TGCCACTCCCATCAAAGTTGGTCCTCCTCCTCCACCCTCTGGCGGATTGC
CTGGAACGTTGAACTCTGATGAGCCAAGAGACCTGGATCTGCCACTGAAG
GAGAGGTTCTTCATCCAACCACTTAGTCCAGCCCAGGCGGCAGAGAGAGC
AAAGGCGTCAGCAAAGGATATTCTTAATGTCAAGGAATTAATAGACAAGA
AGGCCTGGCCCTATGTTCAGAATGATCTCCGTCTCAGGGCCTCATACCTT
CGCTATGACCTCAACACTATCATTTCTGCTAAGCCCAAAGATGAGAAACA
ATCCCTCAAGAACCTCACTGGAAAGCTCTTCCAGACCATCGGCAATCTTG
ACCATGCGGCAAAGATTAAGAGCACTCCTGAAGCAGAGAAATACTATGCT
GAGACTGTATCTACCCTGAACGATGTTCTCTCCAAGGTTGGCTAAGCAGA
ATTATATAATCTGATGTAACTATATTTTTCATTTTGTGAGGCAACACTTC
TGTGAATTTATTGCAAGCTGGCGTCCGCTCAAGTATCGAGAATATTTGTC
CAGGTGAATGTCTATAATTTACTGCTA
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