CX287003
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287003 vs. ExPASy Swiss-Prot
Match: FDH_SOLTU (Formate dehydrogenase, mitochondrial OS=Solanum tuberosum GN=FDH1 PE=1 SV=2) HSP 1 Score: 335.495 bits (859), Expect = 1.483e-91 Identity = 169/219 (77.17%), Postives = 178/219 (81.28%), Query Frame = 2 Query: 5 MAMKRVASSAINAFAXXXXXXXXXXXXXXXXXXXXKKIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLKPF 661 MAM RVAS+A A KKIVGVFYK NEYA MNPNFLGC E G+REWLESKGHQYIVT DKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAG+GSDH+DL GLTVAEVTGSN VSVAEDELMRILILVRNFLPGHHQVI+GEWNVA +A+RA+DLEGKTVGTVG GRIG+LLLQRLKPF Sbjct: 1 MAMSRVASTAARAITSPSSLVFTRELQASPGP---KKIVGVFYKANEYAEMNPNFLGCAENALGIREWLESKGHQYIVTPDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGIGSDHVDLKAAAAAGLTVAEVTGSNTVSVAEDELMRILILVRNFLPGHHQVINGEWNVAAIAHRAYDLEGKTVGTVGAGRIGRLLLQRLKPF 216
BLAST of CX287003 vs. ExPASy Swiss-Prot
Match: FDH_ARATH (Formate dehydrogenase, mitochondrial OS=Arabidopsis thaliana GN=FDH1 PE=1 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 9.611e-91 Identity = 163/219 (74.43%), Postives = 181/219 (82.65%), Query Frame = 2 Query: 5 MAMKRVASSAINAFAXXXXXXXXXXXXXXXXXXXXKKIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLKPF 661 MAM++ A + I A + KKIVGVFYK NEYA+ NPNFLGCVE G+R+WLES+GHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNL+LLLTAG+GSDHIDL GLTVAEVTGSNVVSVAEDELMRILIL+RNF+PG++QV+ GEWNVAG+AYRA+DLEGKT+GTVG GRIGKLLLQRLKPF Sbjct: 1 MAMRQAAKATIRACSSSSSSGYFARRQFNASSGDSKKIVGVFYKANEYATKNPNFLGCVENALGIRDWLESQGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLKLLLTAGIGSDHIDLQAAAAAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNVAGIAYRAYDLEGKTIGTVGAGRIGKLLLQRLKPF 219
BLAST of CX287003 vs. ExPASy Swiss-Prot
Match: FDH1_ORYSJ (Formate dehydrogenase 1, mitochondrial OS=Oryza sativa subsp. japonica GN=Os06g0486800 PE=1 SV=2) HSP 1 Score: 312.383 bits (799), Expect = 1.344e-84 Identity = 151/184 (82.07%), Postives = 165/184 (89.67%), Query Frame = 2 Query: 110 KKIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLKPF 661 KKIVGVFYKG EYA NPNF+GCVEG G+REWLESKGH YIVTDDKEG + ELEKHI D+HVLI+TPFHPAYV+AERIKKAKNL+LLLTAG+GSDHIDL GLTVAEVTGSN VSVAEDELMRILIL+RNFLPG+ QV+ GEWNVAG+AYRA+DLEGKTVGTVG GRIG+LLLQRLKPF Sbjct: 28 KKIVGVFYKGGEYADKNPNFVGCVEGALGIREWLESKGHHYIVTDDKEGLNSELEKHIEDMHVLITTPFHPAYVSAERIKKAKNLELLLTAGIGSDHIDLPAAAAAGLTVAEVTGSNTVSVAEDELMRILILLRNFLPGYQQVVHGEWNVAGIAYRAYDLEGKTVGTVGAGRIGRLLLQRLKPF 211
BLAST of CX287003 vs. ExPASy Swiss-Prot
Match: FDH2_ORYSJ (Formate dehydrogenase 2, mitochondrial OS=Oryza sativa subsp. japonica GN=Os06g0486900 PE=2 SV=1) HSP 1 Score: 310.457 bits (794), Expect = 5.108e-84 Identity = 145/184 (78.80%), Postives = 165/184 (89.67%), Query Frame = 2 Query: 110 KKIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLKPF 661 KK+VGVFYKG EYA NPNF+GCV+ G+R WLESKGH+YIVTDDKEG +CELEKHI D HVLI+TPFHPAY+TAERIKKAKNL+LLLTAGVGSDHIDL GLTVAE+TGSN VSVAED+LMRIL+L+RNFLPGHHQ+++GEWNVAG+A+R +DLEGKTVGTVG GRIG+LLLQRLKPF Sbjct: 30 KKVVGVFYKGGEYADKNPNFVGCVDSALGIRGWLESKGHRYIVTDDKEGINCELEKHIEDAHVLITTPFHPAYITAERIKKAKNLELLLTAGVGSDHIDLPAAAAAGLTVAEITGSNTVSVAEDQLMRILLLLRNFLPGHHQIVNGEWNVAGIAHRTYDLEGKTVGTVGAGRIGRLLLQRLKPF 213
BLAST of CX287003 vs. ExPASy Swiss-Prot
Match: FDH_HORVU (Formate dehydrogenase, mitochondrial OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 296.975 bits (759), Expect = 5.844e-80 Identity = 143/184 (77.72%), Postives = 160/184 (86.96%), Query Frame = 2 Query: 110 KKIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLKPF 661 KKIVGVFY+ EYA NPNF+GCVEG G+R+WLESKGH YIVTDDKEG + ELEKHI D+HVLI+TPFHPAYVTAE+IKKAK +LLLTAG+GSDHIDL GLTVA VTGSN VSVAEDELMRILIL+RNFLPG+ QV+ GEWNVAG+A+RA+DLEGKTVGTVG GR G+LLLQRLKPF Sbjct: 29 KKIVGVFYQAGEYADKNPNFVGCVEGALGIRDWLESKGHHYIVTDDKEGFNSELEKHIEDMHVLITTPFHPAYVTAEKIKKAKTPELLLTAGIGSDHIDLPAAAAAGLTVARVTGSNTVSVAEDELMRILILLRNFLPGYQQVVKGEWNVAGIAHRAYDLEGKTVGTVGAGRYGRLLLQRLKPF 212
BLAST of CX287003 vs. ExPASy Swiss-Prot
Match: FDH_EMENI (Probable formate dehydrogenase OS=Emericella nidulans GN=aciA PE=2 SV=2) HSP 1 Score: 207.223 bits (526), Expect = 6.090e-53 Identity = 100/181 (55.25%), Postives = 129/181 (71.27%), Query Frame = 2 Query: 125 VFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLN--XXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLKPF 661 V Y G +A P LG E G+R+W+E +GH + T DK+G + +K + D V+I+TPFHP Y+TAER+ KAKNL+L +TAG+GSDH+DL+ G+TVAEVTGSNVVSVAE +M IL+LVRNF+P H Q+ +G+WNVA VA DLE K VGTVG GRIG+ +L+RLKPF Sbjct: 2 VLYDGGSHAKDQPGLLGTTENELGIRKWIEEQGHTLVTTSDKDGENSTFDKELVDAEVIITTPFHPGYLTAERLAKAKNLKLAVTAGIGSDHVDLDAANKTNGGITVAEVTGSNVVSVAEHVVMTILLLVRNFVPAHDQIRNGDWNVAAVAKNEFDLENKVVGTVGVGRIGERVLRRLKPF 182
BLAST of CX287003 vs. ExPASy Swiss-Prot
Match: FDH_NEUCR (Formate dehydrogenase OS=Neurospora crassa GN=fdh PE=2 SV=1) HSP 1 Score: 206.453 bits (524), Expect = 1.039e-52 Identity = 99/185 (53.51%), Postives = 130/185 (70.27%), Query Frame = 2 Query: 113 KIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLN--XXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLKPF 661 K++ V Y G ++ P LG ++ GLR+WLE +GH + T DK+G + +K + D ++I+TPFHP Y+TAER+ +AK L+L +TAG+GSDH+DLN G+TVAEVTGSNVVSVAE LM IL+LVRNF+P H Q+ G W+VA A DLEGK VGTVG GRIG+ +L+RLKPF Sbjct: 3 KVLAVLYDGGKHGEEVPELLGTIQNELGLRKWLEDQGHTLVTTCDKDGENSTFDKELEDAEIIITTPFHPGYLTAERLARAKKLKLAVTAGIGSDHVDLNAANKTNGGITVAEVTGSNVVSVAEHVLMTILVLVRNFVPAHEQIQEGRWDVAEAAKNEFDLEGKVVGTVGVGRIGERVLRRLKPF 187
BLAST of CX287003 vs. ExPASy Swiss-Prot
Match: FDH_PICAN (Formate dehydrogenase OS=Pichia angusta GN=FMDH PE=3 SV=2) HSP 1 Score: 206.068 bits (523), Expect = 1.357e-52 Identity = 102/185 (55.14%), Postives = 130/185 (70.27%), Query Frame = 2 Query: 113 KIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEGPDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXG--LTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLKPF 661 K+V V Y ++A GC E G+R+WLE +GH +VT DKEG + LEK+I D V+ISTPFHPAY+T ERI KAK L+LL+ AGVGSDHIDL+ G ++V EVTGSNVVSVAE +M +L+LVRNF+P H Q+ISG WNVA +A + D+EGK + T+G GRIG +L+RL F Sbjct: 2 KVVLVLYDAGKHAQDEERLYGCTENALGIRDWLEKQGHDVVVTSDKEGQNSVLEKNISDADVIISTPFHPAYITKERIDKAKKLKLLVVAGVGSDHIDLDYINQSGRDISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIISGGWNVAEIAKDSFDIEGKVIATIGAGRIGYRVLERLVAF 186
BLAST of CX287003 vs. ExPASy Swiss-Prot
Match: FDH2_YEAST (Formate dehydrogenase 2 OS=Saccharomyces cerevisiae GN=FDH2 PE=2 SV=2) HSP 1 Score: 179.104 bits (453), Expect = 1.776e-44 Identity = 86/184 (46.74%), Postives = 125/184 (67.93%), Query Frame = 2 Query: 113 KIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEG-PDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLKPF 661 K++ V Y+G ++A LGC+E G+R ++E +G++ + T DK+ P +++ + D ++I+TPF PAY++ RI +A NL+L +TAGVGSDH+DL +TV EVTGSNVVSVAE + IL+L+RN+ GH Q I+GEW++AGVA +DLE K + TVG GRIG +L+RL F Sbjct: 5 KVLLVLYEGGKHAEEQEKLLGCIENELGIRNFIEEQGYELVTTIDKDPEPTSTVDRELKDAEIVITTPFFPAYISRNRIAEAPNLKLCVTAGVGSDHVDLEAANERKITVTEVTGSNVVSVAEHVMATILVLIRNYNGGHQQAINGEWDIAGVAKNEYDLEDKIISTVGAGRIGYRVLERLVAF 188
BLAST of CX287003 vs. ExPASy Swiss-Prot
Match: FDH1_YEAST (Formate dehydrogenase 1 OS=Saccharomyces cerevisiae GN=FDH1 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 1.776e-44 Identity = 86/184 (46.74%), Postives = 125/184 (67.93%), Query Frame = 2 Query: 113 KIVGVFYKGNEYASMNPNFLGCVEGGCGLREWLESKGHQYIVTDDKEG-PDCELEKHIPDLHVLISTPFHPAYVTAERIKKAKNLQLLLTAGVGSDHIDLNXXXXXGLTVAEVTGSNVVSVAEDELMRILILVRNFLPGHHQVISGEWNVAGVAYRAHDLEGKTVGTVGCGRIGKLLLQRLKPF 661 K++ V Y+G ++A LGC+E G+R ++E +G++ + T DK+ P +++ + D ++I+TPF PAY++ RI +A NL+L +TAGVGSDH+DL +TV EVTGSNVVSVAE + IL+L+RN+ GH Q I+GEW++AGVA +DLE K + TVG GRIG +L+RL F Sbjct: 5 KVLLVLYEGGKHAEEQEKLLGCIENELGIRNFIEEQGYELVTTIDKDPEPTSTVDRELKDAEIVITTPFFPAYISRNRIAEAPNLKLCVTAGVGSDHVDLEAANERKITVTEVTGSNVVSVAEHVMATILVLIRNYNGGHQQAINGEWDIAGVAKNEYDLEDKIISTVGAGRIGYRVLERLVAF 188 The following BLAST results are available for this feature:
BLAST of CX287003 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 14
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287003 ID=CX287003; Name=CX287003; organism=Citrus clementina; type=EST; length=663bpback to top |