CX287339
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_ARATH (Eukaryotic translation initiation factor 3 subunit F OS=Arabidopsis thaliana GN=TIF3F1 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 1.197e-48 Identity = 90/124 (72.58%), Postives = 105/124 (84.68%), Query Frame = 1 Query: 43 AASDRTVLQF----GPSSAATSNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 A S+ T+LQF +SA TS +TA++HPLVIFN+CDC+VRRPD AERVIGTLLGS+LPDGTVDIRNSY VPHNE SDQVA+DI+YHH ML SHLKVN +E IVGW+STG GV GGS+LIH+F Sbjct: 3 ATSEHTILQFVSPSSTASATTSVLTARIHPLVIFNVCDCFVRRPDSAERVIGTLLGSILPDGTVDIRNSYAVPHNESSDQVAVDIDYHHNMLASHLKVNSKETIVGWYSTGAGVNGGSSLIHDF 126
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_AEDAE (Eukaryotic translation initiation factor 3 subunit F OS=Aedes aegypti GN=eIF3-S5 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 1.248e-21 Identity = 50/102 (49.02%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 97 NVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 N+T +VHP+V+F I D Y RR +ERVIGTLLGSV G V++ N + VPH E +DQV ++ Y + + +VNP E IVGW++TG VT S++IHE+ Sbjct: 9 NLTVRVHPVVLFQIVDAYERRNADSERVIGTLLGSV-DKGVVEVTNCFCVPHKEHADQVEAELGYASDLYDLNRRVNPSENIVGWWATGQEVTNHSSVIHEY 109
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_CULQU (Eukaryotic translation initiation factor 3 subunit F OS=Culex quinquefasciatus GN=eIF3-S5 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.630e-21 Identity = 50/102 (49.02%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 97 NVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 N+T +VHP+V+F I D Y RR +ERVIGTLLGSV G V++ N + VPH E +DQV ++ Y + + +VNP E IVGW++TG VT S++IHE+ Sbjct: 9 NLTVRVHPVVLFQIVDAYERRNADSERVIGTLLGSV-EKGIVEVTNCFCVPHKEHADQVEAELGYASDLYDLNRRVNPSENIVGWWATGQEVTNHSSVIHEY 109
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EI3F1_DROAN (Eukaryotic translation initiation factor 3 subunit F-1 OS=Drosophila ananassae GN=eIF3-S5-1 PE=3 SV=1) HSP 1 Score: 101.293 bits (251), Expect = 1.630e-21 Identity = 49/102 (48.04%), Postives = 67/102 (65.69%), Query Frame = 1 Query: 97 NVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 N+T +VHP+V+F + D Y RR + RVIGTLLGSV G V++ N + VPH E DQV ++ Y M + KVNP E +VGW++TG VT S++IHE+ Sbjct: 5 NLTVRVHPVVLFQVVDAYERRNADSHRVIGTLLGSV-DKGVVEVTNCFCVPHKEHDDQVEAELSYALDMYDLNRKVNPNESVVGWWATGNDVTNHSSVIHEY 105
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_PHANO (Eukaryotic translation initiation factor 3 subunit F OS=Phaeosphaeria nodorum GN=SNOG_04858 PE=3 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 2.780e-21 Identity = 49/106 (46.23%), Postives = 70/106 (66.04%), Query Frame = 1 Query: 88 ATSNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 +T+ + + P +F+I D +RRP ERVIGTLLG+ DGT ++IRN Y VPH E ++QV +D++Y ML HL+ NP+EV+VGW++T + SALI F Sbjct: 24 STAPLNVAIQPQAVFSILDHSLRRPADQERVIGTLLGTRSEDGTEIEIRNCYAVPHTETAEQVEVDMDYQKQMLALHLRANPREVLVGWYATSSDLNTFSALIQNF 129
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_MALGO (Eukaryotic translation initiation factor 3 subunit F OS=Malassezia globosa (strain ATCC 96807 / CBS 7966) GN=MGL_1945 PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 3.631e-21 Identity = 55/126 (43.65%), Postives = 80/126 (63.49%), Query Frame = 1 Query: 40 MAASDRTVLQFGPSSAA---TSNVTA-KVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSD--QVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHE 399 +AAS L F P+++ + ++TA KVHP+ +F+I D Y+RR RVIGTLLG+ + V++RN++ VPH E D Q+ LD E+H ML HL+V P EV++GW+ST + SALI + Sbjct: 7 LAASSALHLSFPPAASGVFHSRSITAVKVHPVALFSILDHYLRRDVSQPRVIGTLLGT-RSESEVEVRNAFAVPHGESQDPWQIHLDAEHHRRMLDLHLRVRPDEVVLGWYSTNTELNSNSALIQD 131
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_SCHPO (Eukaryotic translation initiation factor 3 subunit F OS=Schizosaccharomyces pombe GN=eif3f PE=1 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.088e-21 Identity = 50/119 (42.02%), Postives = 75/119 (63.03%), Query Frame = 1 Query: 40 MAASDRTVLQFGPSSAATSNVTAKVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGT-VDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALI 393 MA + VL S+ +S + + P V+F+I D R+ + +RVIGTLLG+ DG ++I++ + VPHNE S+QV +++EYH M HLK NP+EV+VGW++T + SALI Sbjct: 1 MALGTKHVLHLTKPSSRSSPLNIVIEPAVLFSILDHSTRKSENNQRVIGTLLGTRSEDGREIEIKSCFAVPHNESSEQVEVEMEYHRAMYHLHLKANPREVVVGWYATSPDLDAFSALI 119
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_PANTR (Eukaryotic translation initiation factor 3 subunit F OS=Pan troglodytes GN=EIF3F PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.380e-20 Identity = 46/98 (46.94%), Postives = 70/98 (71.43%), Query Frame = 1 Query: 109 KVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+ Sbjct: 97 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEY 193
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_MOUSE (Eukaryotic translation initiation factor 3 subunit F OS=Mus musculus GN=Eif3f PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.380e-20 Identity = 46/98 (46.94%), Postives = 70/98 (71.43%), Query Frame = 1 Query: 109 KVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+ Sbjct: 97 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEY 193
BLAST of CX287339 vs. ExPASy Swiss-Prot
Match: EIF3F_MACFA (Eukaryotic translation initiation factor 3 subunit F OS=Macaca fascicularis GN=EIF3F PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.380e-20 Identity = 46/98 (46.94%), Postives = 70/98 (71.43%), Query Frame = 1 Query: 109 KVHPLVIFNICDCYVRRPDQAERVIGTLLGSVLPDGTVDIRNSYVVPHNEFSDQVALDIEYHHTMLKSHLKVNPQEVIVGWFSTGLGVTGGSALIHEF 402 ++HP+++ +I D Y RR + A RVIGTLLG+V +V++ N + VPHNE D+VA+D+E+ M + H KV+P E+I+GW++TG +T S LIHE+ Sbjct: 97 RLHPVILASIVDSYERRNEGAARVIGTLLGTV-DKHSVEVTNCFSVPHNESEDEVAVDMEFAKNMYELHKKVSPNELILGWYATGHDITEHSVLIHEY 193 The following BLAST results are available for this feature:
BLAST of CX287339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 53
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287339 ID=CX287339; Name=CX287339; organism=Citrus clementina; type=EST; length=404bpback to top |