CX287346
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287346 vs. ExPASy Swiss-Prot
Match: GDI1_SCHPO (Probable secretory pathway GDP dissociation inhibitor 1 OS=Schizosaccharomyces pombe GN=gdi1 PE=2 SV=1) HSP 1 Score: 183.726 bits (465), Expect = 2.775e-46 Identity = 87/131 (66.41%), Postives = 106/131 (80.92%), Query Frame = 3 Query: 48 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLM 440 MDEEYDVIVLGTGL EC+LSGLLSVDG KVLH+DRNDYYG +S+SLNL QL+ FR EQ P LG RD+ VD++PKF++ANG L +LI+TDVT+Y+ FK + GS+VY G++ KVP +MEALKSPLM Sbjct: 1 MDEEYDVIVLGTGLTECVLSGLLSVDGKKVLHIDRNDYYGADSASLNLTQLYALFRPGEQRPESLGRDRDWCVDLVPKFLMANGDLTNILIYTDVTRYIEFKQIAGSYVYRDGRIAKVPGNEMEALKSPLM 131
BLAST of CX287346 vs. ExPASy Swiss-Prot
Match: GDIA_RAT (Rab GDP dissociation inhibitor alpha OS=Rattus norvegicus GN=Gdi1 PE=1 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 4.006e-45 Identity = 88/132 (66.67%), Postives = 111/132 (84.09%), Query Frame = 3 Query: 48 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLM 440 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LM Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLM 132
BLAST of CX287346 vs. ExPASy Swiss-Prot
Match: GDIA_PONPY (Rab GDP dissociation inhibitor alpha OS=Pongo pygmaeus GN=GDI1 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 4.006e-45 Identity = 88/132 (66.67%), Postives = 111/132 (84.09%), Query Frame = 3 Query: 48 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLM 440 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LM Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLM 132
BLAST of CX287346 vs. ExPASy Swiss-Prot
Match: GDIA_PANTR (Rab GDP dissociation inhibitor alpha OS=Pan troglodytes GN=GDI1 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 4.006e-45 Identity = 88/132 (66.67%), Postives = 111/132 (84.09%), Query Frame = 3 Query: 48 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLM 440 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LM Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLM 132
BLAST of CX287346 vs. ExPASy Swiss-Prot
Match: GDIA_MOUSE (Rab GDP dissociation inhibitor alpha OS=Mus musculus GN=Gdi1 PE=1 SV=3) HSP 1 Score: 179.874 bits (455), Expect = 4.006e-45 Identity = 88/132 (66.67%), Postives = 111/132 (84.09%), Query Frame = 3 Query: 48 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLM 440 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LM Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQILEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLM 132
BLAST of CX287346 vs. ExPASy Swiss-Prot
Match: GDIA_MACFA (Rab GDP dissociation inhibitor alpha OS=Macaca fascicularis GN=GDI1 PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 4.006e-45 Identity = 88/132 (66.67%), Postives = 111/132 (84.09%), Query Frame = 3 Query: 48 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLM 440 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LM Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLM 132
BLAST of CX287346 vs. ExPASy Swiss-Prot
Match: GDIA_HUMAN (Rab GDP dissociation inhibitor alpha OS=Homo sapiens GN=GDI1 PE=1 SV=2) HSP 1 Score: 179.874 bits (455), Expect = 4.006e-45 Identity = 88/132 (66.67%), Postives = 111/132 (84.09%), Query Frame = 3 Query: 48 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLM 440 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LM Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPESMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLM 132
BLAST of CX287346 vs. ExPASy Swiss-Prot
Match: GDIA_BOVIN (Rab GDP dissociation inhibitor alpha OS=Bos taurus GN=GDI1 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 5.233e-45 Identity = 88/132 (66.67%), Postives = 111/132 (84.09%), Query Frame = 3 Query: 48 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLM 440 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSFVY GK++KVP+T+ EAL S LM Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPETMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFVYKGGKIYKVPSTETEALASNLM 132
BLAST of CX287346 vs. ExPASy Swiss-Prot
Match: GDIA_CANFA (Rab GDP dissociation inhibitor alpha OS=Canis familiaris GN=GDI1 PE=2 SV=1) HSP 1 Score: 179.104 bits (453), Expect = 6.834e-45 Identity = 87/132 (65.91%), Postives = 111/132 (84.09%), Query Frame = 3 Query: 48 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLN-LIQLWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLM 440 MDEEYDVIVLGTGL ECILSG++SV+G KVLHMDRN YYGGESSS+ L +L+KRF+ E PP +G RD+NVD+IPKF++ANG LV++L++T+VT+YL FK V+GSF+Y GK++KVP+T+ EAL S LM Sbjct: 1 MDEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSSITPLEELYKRFQLLEGPPEAMGRGRDWNVDLIPKFLMANGQLVKMLLYTEVTRYLDFKVVEGSFIYKGGKIYKVPSTETEALASNLM 132
BLAST of CX287346 vs. ExPASy Swiss-Prot
Match: GDIB_RAT (Rab GDP dissociation inhibitor beta OS=Rattus norvegicus GN=Gdi2 PE=1 SV=2) HSP 1 Score: 175.252 bits (443), Expect = 9.868e-44 Identity = 83/132 (62.88%), Postives = 111/132 (84.09%), Query Frame = 3 Query: 48 MDEEYDVIVLGTGLKECILSGLLSVDGLKVLHMDRNDYYGGESSSLNLIQ-LWKRFRGNEQPPAHLGSSRDYNVDMIPKFIIANGALVRVLIHTDVTKYLYFKAVDGSFVYNKGKVHKVPATDMEALKSPLM 440 M+EEYDVIVLGTGL ECILSG++SV+G KVLHMD+N YYGGES+S+ ++ L+KRF+ QPPA +G RD+NVD+IPKF++ANG LV++L+ T+VT+Y+ FK ++GSFVY GK++KVP+T+ EAL S LM Sbjct: 1 MNEEYDVIVLGTGLTECILSGIMSVNGKKVLHMDQNPYYGGESASITPLEDLYKRFKLPGQPPASMGRGRDWNVDLIPKFLMANGQLVKMLLFTEVTRYMDFKVIEGSFVYKGGKIYKVPSTEAEALASSLM 132 The following BLAST results are available for this feature:
BLAST of CX287346 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287346 ID=CX287346; Name=CX287346; organism=Citrus clementina; type=EST; length=442bpback to top |