CX287461
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: HGS_RAT (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus GN=Hgs PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 7.026e-20 Identity = 42/109 (38.53%), Postives = 69/109 (63.30%), Query Frame = 3 Query: 225 MVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 551 ++D+ATS +L+ DW ++ICD++ QAK V IKK++ +N V L AL ++E+++KNCG VH VA K + E+ ++ +++ + +V+ KIL LI W AF Sbjct: 11 LLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKELLKRQVEVNVRNKILYLIQAWAHAF 119
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: HGS_MOUSE (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus GN=Hgs PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 7.026e-20 Identity = 42/109 (38.53%), Postives = 69/109 (63.30%), Query Frame = 3 Query: 225 MVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 551 ++D+ATS +L+ DW ++ICD++ QAK V IKK++ +N V L AL ++E+++KNCG VH VA K + E+ ++ +++ + +V+ KIL LI W AF Sbjct: 11 LLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKELLKRQVEVNVRNKILYLIQAWAHAF 119
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: HGS_HUMAN (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Homo sapiens GN=HGS PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.199e-19 Identity = 42/109 (38.53%), Postives = 68/109 (62.39%), Query Frame = 3 Query: 225 MVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 551 ++D+ATS +L+ DW ++ICD++ QAK V IKK++ +N V L AL ++E+++KNCG VH VA K + E+ + +++ + +V+ KIL LI W AF Sbjct: 11 LLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAF 119
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: HGS_BOVIN (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Bos taurus GN=HGS PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 1.199e-19 Identity = 42/109 (38.53%), Postives = 68/109 (62.39%), Query Frame = 3 Query: 225 MVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 551 ++D+ATS +L+ DW ++ICD++ QAK V IKK++ +N V L AL ++E+++KNCG VH VA K + E+ + +++ + +V+ KIL LI W AF Sbjct: 11 LLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVSSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAF 119
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: TM1L2_MOUSE (TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=1 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.260e-18 Identity = 48/116 (41.38%), Postives = 73/116 (62.93%), Query Frame = 3 Query: 216 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRI-GSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHE-MVKIARKK--PDTHVKEKILILIDTWQEAF 551 V +++AT L DW +N+EICD++N KD ++ +KKR+ G+RN + +LALT+LET +KNCG H+ VA ++ + +VKI K P T V++K+L LI W +AF Sbjct: 13 VGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLSGNRNYREVMLALTVLETCVKNCGHRFHLLVANRDFIDSVLVKIISPKNNPPTIVQDKVLALIQAWADAF 128
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: TM1L2_HUMAN (TOM1-like protein 2 OS=Homo sapiens GN=TOM1L2 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 2.952e-18 Identity = 48/116 (41.38%), Postives = 73/116 (62.93%), Query Frame = 3 Query: 216 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRI-GSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHE-MVKIARKK--PDTHVKEKILILIDTWQEAF 551 V +++AT L DW +N+EICD++N KD ++ +KKR+ G+RN + +LALT+LET +KNCG H+ VA ++ + +VKI K P T V++K+L LI W +AF Sbjct: 13 VGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLALIQAWADAF 128
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: TM1L2_XENLA (TOM1-like protein 2 OS=Xenopus laevis GN=tom1l2 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 6.576e-18 Identity = 47/116 (40.52%), Postives = 72/116 (62.07%), Query Frame = 3 Query: 216 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRI-GSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHE-MVKIARKK--PDTHVKEKILILIDTWQEAF 551 V +++AT L DW +N+EICD++N KD ++ +KKR+ G+RN + +LALT+LET +KNCG H+ V ++ + +VKI K P T V++K+L LI W +AF Sbjct: 13 VGQCIEKATDGSLQSEDWTLNMEICDIINETEEGPKDAMRALKKRLNGNRNYREVMLALTVLETCVKNCGHRFHVQVTHRDFIDGILVKIISPKNNPPTIVQDKVLALIQAWADAF 128
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: TOM1_CHICK (Target of Myb protein 1 OS=Gallus gallus GN=TOM1 PE=2 SV=2) HSP 1 Score: 90.1225 bits (222), Expect = 8.589e-18 Identity = 46/116 (39.66%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 216 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRI-GSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVK---IARKKPDTHVKEKILILIDTWQEAF 551 V ++RAT L G DW++N+EICD++N KD + IKKRI G++N +LALT+LET +KNCG H+ VA ++ + ++ + + P V +K+L LI +W +AF Sbjct: 13 VGQRIERATDGSLRGEDWSLNMEICDIINETEEGPKDAFRAIKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHILVASQDFVESVLVRTILPKNNPPAIVHDKVLTLIQSWADAF 128
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: TOM1_HUMAN (Target of Myb protein 1 OS=Homo sapiens GN=TOM1 PE=1 SV=2) HSP 1 Score: 89.3521 bits (220), Expect = 1.465e-17 Identity = 45/116 (38.79%), Postives = 72/116 (62.07%), Query Frame = 3 Query: 216 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRI-GSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVK---IARKKPDTHVKEKILILIDTWQEAF 551 V +++AT L DWA+N+EICD++N KD ++ +KKRI G++N +LALT+LET +KNCG H+ VA ++ + ++ + + P T V +K+L LI +W +AF Sbjct: 13 VGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWADAF 128
BLAST of CX287461 vs. ExPASy Swiss-Prot
Match: TOM1_MOUSE (Target of Myb protein 1 OS=Mus musculus GN=Tom1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 2.499e-17 Identity = 45/116 (38.79%), Postives = 71/116 (61.21%), Query Frame = 3 Query: 216 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRI-GSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVK---IARKKPDTHVKEKILILIDTWQEAF 551 V +++AT L DWA+N+EICD++N KD + +KKRI G++N +LALT+LET +KNCG H+ VA ++ + ++ + + P T V +K+L LI +W +AF Sbjct: 13 VGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDAFRAVKKRIMGNKNFHEVMLALTVLETCVKNCGHRFHVLVANQDFVENVLVRTILPKNNPPTIVHDKVLNLIQSWADAF 128 The following BLAST results are available for this feature:
BLAST of CX287461 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >CX287461 ID=CX287461; Name=CX287461; organism=Citrus clementina; type=EST; length=589bpback to top |