CX287464
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX287464 vs. ExPASy Swiss-Prot
Match: AGO4B_ORYSJ (Protein argonaute 4B OS=Oryza sativa subsp. japonica GN=AGO4B PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 5.734e-45 Identity = 87/146 (59.59%), Postives = 110/146 (75.34%), Query Frame = 1 Query: 127 VEEQEPAKK--KVVRVPISRRGLGSRGQRISLLTNHFKVNVTNVEGHFYHYSVSVSYEDGRPVDGKGAGRKVIDRVQETYNAELDGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDISSNRNNGNASPDAHGSPNGNDRKRLRRPY 558 VE + PA K K R P++R GLG +GQ I LL NH+KV+V + E +F+HY+V + YED RPVDGKG GRKVID++Q+TY +EL KDFAYDGEKSLFT+G LP+ EFTVVLED+S+ + N SP + SP G+DRKR+RRPY Sbjct: 29 VESEVPANKPAKPKRFPMARPGLGRKGQPIQLLANHYKVSVKSSEEYFFHYNVILKYEDDRPVDGKGVGRKVIDKLQQTYRSELSSKDFAYDGEKSLFTIGALPQVTNEFTVVLEDVSTGKTAANGSPGGNDSPGGSDRKRVRRPY 174
BLAST of CX287464 vs. ExPASy Swiss-Prot
Match: AGO4A_ORYSJ (Protein argonaute 4A OS=Oryza sativa subsp. japonica GN=AGO4A PE=2 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.047e-38 Identity = 77/135 (57.04%), Postives = 100/135 (74.07%), Query Frame = 1 Query: 154 KVVRVPISRRGLGSRGQRISLLTNHFKVNVTNVEGHFYHYSVSVSYEDGRPVDGKGAGRKVIDRVQETYNAELDGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDISSNRNNGNASPDAHGSPNGNDRKRLRRPY 558 K R ++R G G +GQ I LLTNHFKV++ + F+HY V++ YED RPVDGKG GRKV+D++Q+TY +EL KDFAYDGEKSLFT+G LP+ EFTVVLED ++ +++ N + SP GNDRKR+RRPY Sbjct: 34 KPKRALMARSGCGKKGQPIQLLTNHFKVSLKAADEFFHHYYVNLKYEDDRPVDGKGIGRKVLDKLQQTYASELANKDFAYDGEKSLFTIGALPQVNNEFTVVLEDFNTGKSSANGGSPGNDSP-GNDRKRVRRPY 167
BLAST of CX287464 vs. ExPASy Swiss-Prot
Match: AGO15_ORYSJ (Protein argonaute 15 OS=Oryza sativa subsp. japonica GN=AGO15 PE=2 SV=2) HSP 1 Score: 157.147 bits (396), Expect = 5.198e-38 Identity = 77/146 (52.74%), Postives = 105/146 (71.92%), Query Frame = 1 Query: 130 EEQEPAK--KKVVRVPISRRGLGSRGQRISLLTNHFKVNVTNVEGHFYHYSVSVSYEDGRPVDGKGAGRKVIDRVQETYNAELDGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDISSN--RNNGNASPDAHGSPNGNDRKRLRRP 555 +E EP+ K ++P+SR+G G+RGQ I LLTNHF+V+V ++GHFYHY V V YEDG PV+ KG R+V+D++QETY +EL G++FAY+GEK LFT G L + K +F VV+ED SS+ +S GSP G+DRKR++RP Sbjct: 6 DEGEPSAMAKPPKKLPMSRKGFGTRGQSIQLLTNHFRVSVRRMDGHFYHYHVEVKYEDGGPVEAKGVCRRVVDKLQETYASELAGREFAYNGEKGLFTAGALLQTKHQFVVVMEDASSSGRTTTRRSSGGDDGSPGGSDRKRMKRP 151
BLAST of CX287464 vs. ExPASy Swiss-Prot
Match: AGO16_ORYSJ (Protein argonaute 16 OS=Oryza sativa subsp. japonica GN=AGO16 PE=2 SV=2) HSP 1 Score: 150.599 bits (379), Expect = 4.865e-36 Identity = 72/129 (55.81%), Postives = 94/129 (72.87%), Query Frame = 1 Query: 157 VVRVPISRRGLGSRGQRISLLTNHFKVNVTNVEGHFYHYSVSVSYEDGRPVDGKGAGRKVIDRVQETYNAELDGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDISSNRNNGNASPDAHGSPNGNDRKR 543 V RVPI+R G G++I LL+NHF V ++ ++ FY YSVS+ ED + +DGKG GRKV+D+V +TY++EL GK+FAYDGEK LFTVGPLP+N EFTV+LE+ SS G+ HGSPN D+KR Sbjct: 17 VKRVPIARPSFGREGKQIKLLSNHFTVKLSGIDAVFYQYSVSIKSEDDKVIDGKGIGRKVMDKVLQTYSSELAGKEFAYDGEKCLFTVGPLPQNNFEFTVILEETSSRAAGGSL---GHGSPNQGDKKR 142
BLAST of CX287464 vs. ExPASy Swiss-Prot
Match: AGOL_ARATH (Argonaute-like protein At2g27880 OS=Arabidopsis thaliana GN=At2g27880 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 4.431e-13 Identity = 52/151 (34.44%), Postives = 76/151 (50.33%), Query Frame = 1 Query: 142 PAKKKVVRVPISRRGLGSRGQRISLLTNHFKVNVTNVEGHFYHYSVSVSYEDGRPVDGKGAGRKVIDRVQETY-NAELDGKDFAYDGEKSLFTVGPLPRNKLEFTVVLEDISSNRNNGNASP-----------DAHGSPNGNDRKRLRRPY 558 PA K V P+ R G G+ G+++ + NHF V V + + YHY VS++ E V K R V+ + + Y ++ L GK AYDG KSL+T GPLP + EF V L + ++ ++G P D + DRK+ PY Sbjct: 139 PASSKAVTFPV-RPGRGTLGKKVMVRANHFLVQVADRD--LYHYDVSINPE----VISKTVNRNVMKLLVKNYKDSHLGGKSPAYDGRKSLYTAGPLPFDSKEFVVNLAEKRADGSSGKDRPFKVAVKNVTSTDLYQLQQFLDRKQREAPY 282 The following BLAST results are available for this feature:
BLAST of CX287464 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX287464 ID=CX287464; Name=CX287464; organism=Citrus clementina; type=EST; length=560bpback to top |