CX288000
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_ARATH (Probable ribose-5-phosphate isomerase OS=Arabidopsis thaliana GN=At2g01290 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.322e-45 Identity = 88/146 (60.27%), Postives = 112/146 (76.71%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEVKSK 668 EVDP LNLVKGRGG+LLREKM+E ASK FVV+ D+SK+V +GGSKLA+PVE+V FCWKF +L+ L GCEA LR GE GK ++TDN NYI+D++ E + D + I +L GVVEHG+FLDMA+ VIIAG+ GV++K+K Sbjct: 119 EVDPFLNLVKGRGGSLLREKMIEGASKKFVVIVDDSKMVKHIGGSKLALPVEIVPFCWKFTAEKLRSLLEGYGCEANLRLGEKGKAFVTDNGNYIVDMHVEEDMGDLGAVSDAILRLPGVVEHGMFLDMASTVIIAGELGVKIKNK 264
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_SYNJA (Ribose-5-phosphate isomerase A OS=Synechococcus sp. (strain JA-3-3Ab) GN=rpiA PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.243e-27 Identity = 67/137 (48.91%), Postives = 90/137 (65.69%), Query Frame = 3 Query: 246 LNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 656 LNL+KG GGALLREK+VEA++ +++AD SK V+ L G++ +PVEVV+F WK L R++ LGC+A LR G PY+TD +YI+D F PI + ++ GVVEHGLF+ MAT IIAG G+E Sbjct: 95 LNLIKGAGGALLREKLVEASAAELIIIADASKKVAHL-GTRFPVPVEVVRFGWKTTLARVE----ALGCQAVLRRTAEGDPYLTDEQHYILDCQF-GPIANPAKLAEQLKGTVGVVEHGLFIGMATEAIIAGPEGIE 225
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BACSK (Ribose-5-phosphate isomerase A OS=Bacillus clausii (strain KSM-K16) GN=rpiA PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.062e-26 Identity = 76/163 (46.63%), Postives = 103/163 (63.19%), Query Frame = 3 Query: 171 GMHLLDKRSTRALPVALM-IHEVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGK-PYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGV 653 G+H++D + L VA E+ P L L+KG GG+LLREK+V AA+K VV+ADESKLV LG KL PVE++ F W+ +R++ LG A LR + GK P+++DN N+I+D F I+D S ++ KL GVVE GLFLDMA I+A K G+ Sbjct: 64 GIHIIDFPTMEKLEVAFDGADEIAPGLMLLKGGGGSLLREKLVAAAAKRLVVLADESKLVEELGAFKL--PVEIIPFGWETTAMRIE----ALGGVASLR--QTGKSPFVSDNHNWILDCDFGN-IRDPYSLHEKVKKLVGVVETGLFLDMACEAIVASKNGI 217
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BACWK (Ribose-5-phosphate isomerase A OS=Bacillus weihenstephanensis (strain KBAB4) GN=rpiA PE=3 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 1.163e-25 Identity = 64/142 (45.07%), Postives = 90/142 (63.38%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 656 E++ +L L+KG GGALLREK+V +SK +++ADESKLVS LG +P+E++ F WK R+Q LGCE LR ++ +P+ITDN N IID F I + TE+ + GVVE GLF++M + II K G++ Sbjct: 85 EINNDLQLIKGGGGALLREKIVATSSKELIIIADESKLVSHLG--TFPLPIEIISFSWKQTEKRIQ----SLGCETHLRM-KDSRPFITDNGNLIIDCIFPNKILNPNDTHTELKMITGVVETGLFINMKSKAIIGTKNGIK 219
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BACCR (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rpiA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.519e-25 Identity = 62/142 (43.66%), Postives = 90/142 (63.38%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 656 E+D L L+KG GGALLREK+V ++SK +++ADESKLV+ LG +P+E++ F WK + ++ + LGC+ LR +N + YITDN N IID F I + V T++ + GVVE GLF+ M + II K G++ Sbjct: 84 EIDSNLQLIKGGGGALLREKIVASSSKKLIIIADESKLVTHLG--TFPLPIEIIPFSWK----QTENKIQSLGCQTTLRL-KNNETYITDNNNMIIDCIFPNHISNPVHLHTQLKMITGVVETGLFISMTSTAIIGTKNGIK 218
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_DESAA (Ribose-5-phosphate isomerase A OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rpiA PE=3 SV=1) HSP 1 Score: 111.694 bits (278), Expect = 3.743e-24 Identity = 65/141 (46.10%), Postives = 86/141 (60.99%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGV 653 EVDP+LNL+KG GGALLREK+V A+K +++ DESK+ L G+ A+PVEVV F L+ LG + +RE + GK + TDN N I+D F P+ D V G + + GVVEHGLFL VI+AG G+ Sbjct: 90 EVDPDLNLIKGGGGALLREKVVAQATKKNIIIVDESKISDKL-GTIFALPVEVVPFATASETRFLE----SLGAKVTVRENQLGKAFKTDNHNRILDADF-GPMDDAVKIGMALSQRAGVVEHGLFLGTTALVIVAGADGI 224
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHOPT (Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris (strain TIE-1) GN=rpiA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.338e-24 Identity = 64/143 (44.76%), Postives = 88/143 (61.54%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGC--EAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGV 653 EVD L+L+KG GGALLREK+V AAS +V+ADESKLV LG + +P+EV+ F LQ+ F GC E KLR G++G ++TD ++I+D I D + + GVVEHGLF+ MA+ V++AG G+ Sbjct: 87 EVDHHLDLIKGGGGALLREKIVAAASDRMIVIADESKLVDTLG--RFPLPIEVIPFGLGATRRALQNAFTAAGCDGELKLRPGKDGHAFVTDGGHWILDAQLGR-IPDAPRLAQLLSVIPGVVEHGLFVGMASTVVLAGADGI 226
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_RHOPA (Ribose-5-phosphate isomerase A OS=Rhodopseudomonas palustris GN=rpiA PE=3 SV=1) HSP 1 Score: 110.538 bits (275), Expect = 8.338e-24 Identity = 64/143 (44.76%), Postives = 88/143 (61.54%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGC--EAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGV 653 EVD L+L+KG GGALLREK+V AAS +V+ADESKLV LG + +P+EV+ F LQ+ F GC E KLR G++G ++TD ++I+D I D + + GVVEHGLF+ MA+ V++AG G+ Sbjct: 87 EVDHHLDLIKGGGGALLREKIVAAASDRMIVIADESKLVDTLG--RFPLPIEVIPFGLGATRRALQNAFTAAGCDGELKLRPGKDGHAFVTDGGHWILDAQLGR-IPDAPRLAQLLSVIPGVVEHGLFVGMASTVVLAGADGI 226
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_BACC1 (Ribose-5-phosphate isomerase A OS=Bacillus cereus (strain ATCC 10987) GN=rpiA PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.422e-23 Identity = 60/142 (42.25%), Postives = 89/142 (62.68%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVE 656 E+D L+L+KG GGALLREK+V ++SK +++ADESKLV+ LG +PVE++ F WK + + + LGC+ LR +N + +ITDN N IID F I + + + + GVVE GLF++M + II K G++ Sbjct: 84 EIDSNLHLIKGGGGALLREKIVASSSKELLIIADESKLVTHLG--TFPLPVEIIPFSWK----QTESKIQSLGCQTTLRL-KNNETFITDNNNMIIDCVFPHNITNPANLHNHLKMITGVVETGLFVNMTSKAIIGTKNGIQ 218
BLAST of CX288000 vs. ExPASy Swiss-Prot
Match: RPIA_STRTD (Ribose-5-phosphate isomerase A OS=Streptococcus thermophilus (strain ATCC BAA-491 / LMD-9) GN=rpiA PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.138e-23 Identity = 67/143 (46.85%), Postives = 86/143 (60.14%), Query Frame = 3 Query: 231 EVDPELNLVKGRGGALLREKMVEAASKSFVVVADESKLVSGLGGSKLAMPVEVVQFCWKFNLVRLQDLFRELGCEAKLREGENGKPYITDNFNYIIDLYFETPIKDGVSAGTEIGKLEGVVEHGLFLDMATAVIIAGKTGVEV 659 EVDP+LN +KG GGALL EK+V +K ++ V DESK+V LG KL PVEVVQ + RL F G + R E G ++TD N+IIDL I + V+ G E+ + GVVEHGLF M VI+AGK GV++ Sbjct: 86 EVDPQLNGIKGGGGALLMEKIVATPTKKYIWVVDESKMVDQLGAFKL--PVEVVQ----YGADRLYLDFESKGYKPSFRVTEQGDRFVTDMKNFIIDLDL-GKINNPVALGDELKAMTGVVEHGLFNGMVNKVIVAGKDGVKI 221 The following BLAST results are available for this feature:
BLAST of CX288000 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 350
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288000 ID=CX288000; Name=CX288000; organism=Citrus clementina; type=EST; length=687bpback to top |