CX288001
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288001 vs. ExPASy Swiss-Prot
Match: AB2F_ARATH (ABC transporter F family member 2 OS=Arabidopsis thaliana GN=ABCF2 PE=3 SV=2) HSP 1 Score: 125.561 bits (314), Expect = 2.733e-28 Identity = 58/67 (86.57%), Postives = 63/67 (94.03%), Query Frame = 2 Query: 2 VLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEKN 202 VLDEPTNHLDIPSKEMLEEAI+EYKGTVITVSHDRYF+KQIVNRV+EV+ L DYAGDYNY+LEKN Sbjct: 552 VLDEPTNHLDIPSKEMLEEAINEYKGTVITVSHDRYFIKQIVNRVIEVRDGGLMDYAGDYNYFLEKN 618
BLAST of CX288001 vs. ExPASy Swiss-Prot
Match: AB5F_ARATH (ABC transporter F family member 5 OS=Arabidopsis thaliana GN=ABCF5 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.771e-27 Identity = 57/67 (85.07%), Postives = 63/67 (94.03%), Query Frame = 2 Query: 2 VLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEKN 202 VLDEPTNHLDIPSKEMLEEAI+EY+GTVI VSHDRYF+KQIVNRV+EV+ L+DYAGDYNYYLEKN Sbjct: 566 VLDEPTNHLDIPSKEMLEEAINEYQGTVIAVSHDRYFIKQIVNRVIEVEDGCLEDYAGDYNYYLEKN 632
BLAST of CX288001 vs. ExPASy Swiss-Prot
Match: YDIF_BACSU (Uncharacterized ABC transporter ATP-binding protein ydiF OS=Bacillus subtilis GN=ydiF PE=3 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 3.348e-18 Identity = 38/66 (57.58%), Postives = 54/66 (81.82%), Query Frame = 2 Query: 2 VLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEK 199 +LDEPTNHLD+ SKE+LE A+ +Y GT++ VSHDRYF+ +I RV+E+ S++++Y GDY+YY EK Sbjct: 467 ILDEPTNHLDLDSKEVLENALIDYPGTLLFVSHDRYFINRIATRVLELSSSHIEEYLGDYDYYTEK 532 HSP 2 Score: 71.633 bits (174), Expect = 4.683e-12 Identity = 31/66 (46.97%), Postives = 46/66 (69.70%), Query Frame = 2 Query: 2 VLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEK 199 +LDEPTNHLDI + LE + Y G ++ VSHDRYF+ ++VN+V EV + + Y G+Y+ YL++ Sbjct: 185 ILDEPTNHLDIDTLTWLEHYLQGYSGAILIVSHDRYFLDKVVNQVYEVSRAESKKYHGNYSAYLDQ 250
BLAST of CX288001 vs. ExPASy Swiss-Prot
Match: YFMR_BACSU (Uncharacterized ABC transporter ATP-binding protein yfmR OS=Bacillus subtilis GN=yfmR PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.436e-13 Identity = 32/66 (48.48%), Postives = 47/66 (71.21%), Query Frame = 2 Query: 2 VLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYLEK 199 +LDEPTNHLD + E LE +S+Y G V+ V+HDRYF+ ++ NR+ E++ +L Y G+Y +LEK Sbjct: 181 ILDEPTNHLDNETIEWLEGYLSQYPGAVMLVTHDRYFLNRVTNRIYELERGSLYTYKGNYEVFLEK 246
BLAST of CX288001 vs. ExPASy Swiss-Prot
Match: EXPZ_BACSU (Nucleotide-binding protein expZ OS=Bacillus subtilis GN=expZ PE=3 SV=2) HSP 1 Score: 70.8626 bits (172), Expect = 7.988e-12 Identity = 28/59 (47.46%), Postives = 43/59 (72.88%), Query Frame = 2 Query: 2 VLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGD 178 +LDEPTNHLD+PS+E LEE +S+Y GT++ VSHDRYF+++ N + + + ++ D Sbjct: 429 ILDEPTNHLDLPSREQLEETLSQYSGTLLAVSHDRYFLEKTTNSKLVISNNGIEKQLND 487
BLAST of CX288001 vs. ExPASy Swiss-Prot
Match: YBIT_ECOLI (Uncharacterized ABC transporter ATP-binding protein ybiT OS=Escherichia coli (strain K12) GN=ybiT PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.178e-11 Identity = 30/64 (46.88%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 2 VLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 193 ++DEPTNHLD+ S E L A+ Y+GT+I VSHDR FV + R++E+ + D++G+Y YL Sbjct: 461 IMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYL 524
BLAST of CX288001 vs. ExPASy Swiss-Prot
Match: YBIT_ECOL6 (Uncharacterized ABC transporter ATP-binding protein ybiT OS=Escherichia coli O6 GN=ybiT PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.178e-11 Identity = 30/64 (46.88%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 2 VLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 193 ++DEPTNHLD+ S E L A+ Y+GT+I VSHDR FV + R++E+ + D++G+Y YL Sbjct: 461 IMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYL 524
BLAST of CX288001 vs. ExPASy Swiss-Prot
Match: YBIT_ECO57 (Uncharacterized ABC transporter ATP-binding protein ybiT OS=Escherichia coli O157:H7 GN=ybiT PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.178e-11 Identity = 30/64 (46.88%), Postives = 44/64 (68.75%), Query Frame = 2 Query: 2 VLDEPTNHLDIPSKEMLEEAISEYKGTVITVSHDRYFVKQIVNRVVEVKGSNLQDYAGDYNYYL 193 ++DEPTNHLD+ S E L A+ Y+GT+I VSHDR FV + R++E+ + D++G+Y YL Sbjct: 461 IMDEPTNHLDMESIESLNMALELYQGTLIFVSHDREFVSSLATRILEITPERVIDFSGNYEDYL 524 The following BLAST results are available for this feature:
BLAST of CX288001 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288001 ID=CX288001; Name=CX288001; organism=Citrus clementina; type=EST; length=721bpback to top |