CX288476
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288476 vs. ExPASy Swiss-Prot
Match: GLR37_ARATH (Glutamate receptor 3.7 OS=Arabidopsis thaliana GN=GLR3.7 PE=2 SV=2) HSP 1 Score: 283.108 bits (723), Expect = 9.386e-76 Identity = 137/217 (63.13%), Postives = 173/217 (79.72%), Query Frame = 3 Query: 9 SQFSPGNS*REKC*SFPTRLEASNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEE-HDSHKVQGYCIDIFLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFK 656 S +P +K SF + + +ITWPGG E PRGWVIAD+A PL+I VPRR SFV FVTEE + SH++QG+CID+F+EALK VPY VPY FE FG+G S+P+Y+ L++MV + V+DAAVGDIAIV +R+K+VDFSQPY STGLV+V P N+ A+ W+FL+PFT +WCV SF++IAVVIWILEHR+N+DFRGPPRRQ++TM LFSFSTLFK Sbjct: 413 SVVAPKTRHSQKKTSFVSDEKLGDITWPGGGREKPRGWVIADSADPLKIVVPRRVSFVEFVTEEKNSSHRIQGFCIDVFIEALKFVPYSVPYIFEPFGNGHSSPNYNHLIQMVTDGVYDAAVGDIAIVPSRSKLVDFSQPYASTGLVVVIPANDDNAT-WIFLRPFTSRLWCVVLVSFLVIAVVIWILEHRINEDFRGPPRRQLSTMLLFSFSTLFK 628
BLAST of CX288476 vs. ExPASy Swiss-Prot
Match: GLR32_ARATH (Glutamate receptor 3.2 OS=Arabidopsis thaliana GN=GLR3.2 PE=1 SV=2) HSP 1 Score: 255.758 bits (652), Expect = 1.605e-67 Identity = 120/198 (60.61%), Postives = 151/198 (76.26%), Query Frame = 3 Query: 75 SNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDIFLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTIRK 668 +N+TWPGG +ETPRGWV +N R LRIGVP RASF FV+ S+KVQGY ID+F A+KL+ Y VP++F LFGDGL NP+++ V V VFDA VGDIAIVT RT+IVDF+QPYI +GLV+VAP+ + W FL+PFT MW VTAA F+++ VIWILEHR+ND+FRGPPR+QI T+ FSFST+F + R+ Sbjct: 444 NNVTWPGGTSETPRGWVFPNNGRRLRIGVPDRASFKEFVSRLDGSNKVQGYAIDVFEAAVKLISYPVPHEFVLFGDGLKNPNFNEFVNNVTIGVFDAVVGDIAIVTKRTRIVDFTQPYIESGLVVVAPVTKLNDTPWAFLRPFTPPMWAVTAAFFLIVGSVIWILEHRINDEFRGPPRKQIVTILWFSFSTMFFSHRE 641
BLAST of CX288476 vs. ExPASy Swiss-Prot
Match: GLR31_ARATH (Glutamate receptor 3.1 OS=Arabidopsis thaliana GN=GLR3.1 PE=2 SV=2) HSP 1 Score: 249.595 bits (636), Expect = 1.150e-65 Identity = 118/200 (59.00%), Postives = 153/200 (76.50%), Query Frame = 3 Query: 75 SNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEH-DSHKVQGYCIDIFLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMVANDV-FDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTIRK 668 +++TWPGG + TPRGW+ +N R LRIGVP RASF FV+ + S+KVQGYCID+F A+KL+ Y VP++F FGDGL+NP+Y+ LV V V FDA VGDIAIVT RT+IVDF+QPYI +GLV+VAP+ + W FL+PFT+ MW VTA+ FV++ IWILEHR+ND+FRGPPRRQI T+ F+FST+F + R+ Sbjct: 442 NSVTWPGGTSVTPRGWIFRNNGRRLRIGVPDRASFKDFVSRVNGSSNKVQGYCIDVFEAAVKLLSYPVPHEFIFFGDGLTNPNYNELVNKVTTGVDFDAVVGDIAIVTKRTRIVDFTQPYIESGLVVVAPVTRLNENPWAFLRPFTLPMWAVTASFFVIVGAAIWILEHRINDEFRGPPRRQIITILWFTFSTMFFSHRE 641
BLAST of CX288476 vs. ExPASy Swiss-Prot
Match: GLR35_ARATH (Glutamate receptor 3.5 OS=Arabidopsis thaliana GN=GLR3.5 PE=2 SV=2) HSP 1 Score: 247.669 bits (631), Expect = 4.370e-65 Identity = 110/198 (55.56%), Postives = 148/198 (74.75%), Query Frame = 3 Query: 75 SNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDIFLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTIRK 668 + I WPG + PRGWV +N +PL+IGVP R S+ + +++ + V+G+CIDIF A++L+PY VP + L+GDG NPSYD L+ VA ++FD AVGD+ I+TNRTK VDF+QP+I +GLV+VAP+ K+S W FLKPFT+EMW VT A F+ + VIWILEHR N++FRGPPRRQI T+F FSFST+F + R+ Sbjct: 463 NEIIWPGEVIKPPRGWVFPENGKPLKIGVPNRVSYKNYASKDKNPLGVKGFCIDIFEAAIQLLPYPVPRTYILYGDGKKNPSYDNLISEVAANIFDVAVGDVTIITNRTKFVDFTQPFIESGLVVVAPVKGAKSSPWSFLKPFTIEMWAVTGALFLFVGAVIWILEHRFNEEFRGPPRRQIITVFWFSFSTMFFSHRE 660
BLAST of CX288476 vs. ExPASy Swiss-Prot
Match: GLR34_ARATH (Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2) HSP 1 Score: 243.047 bits (619), Expect = 1.076e-63 Identity = 110/196 (56.12%), Postives = 145/196 (73.98%), Query Frame = 3 Query: 81 ITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDIFLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTIRK 668 I +PG T+ PRGWV +N +PLRIGVP R S+ +V+++ + V+GYCID+F A++L+PY VP + L+GDG NPSYD LV V D FD AVGDI IVTNRT+ VDF+QP+I +GLV+VAP+ K+S W FLKPFT+EMW VT F+ + ++WILEHR N +FRGPPRRQ+ T+F FSFST+F + R+ Sbjct: 472 IIYPGEVTKPPRGWVFPNNGKPLRIGVPNRVSYTDYVSKDKNPPGVRGYCIDVFEAAIELLPYPVPRTYILYGDGKRNPSYDNLVNEVVADNFDVAVGDITIVTNRTRYVDFTQPFIESGLVVVAPVKEAKSSPWSFLKPFTIEMWAVTGGFFLFVGAMVWILEHRFNQEFRGPPRRQLITIFWFSFSTMFFSHRE 667
BLAST of CX288476 vs. ExPASy Swiss-Prot
Match: GLR31_ORYSJ (Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica GN=GLR3.1 PE=1 SV=1) HSP 1 Score: 225.328 bits (573), Expect = 2.323e-58 Identity = 95/192 (49.48%), Postives = 136/192 (70.83%), Query Frame = 3 Query: 78 NITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDIFLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLF 653 ++ WPG PRGWV +N ++IGVP R S+ FV+ + ++ V+G CID+F+ A+ L+ Y VPY+F FG+ NPSY L+ + D FDA VGD+ I+TNRTK+VDF+QPY+S+GLV++ + + W FL+PFT++MW VT F++I V+W+LEHR+ND+FRGPP +Q+ T+F FSFSTLF Sbjct: 446 DVIWPGETINKPRGWVFPNNGNEIKIGVPDRVSYRQFVSVDSETGMVRGLCIDVFVAAINLLAYPVPYRFVPFGNNRENPSYSELINKIITDDFDAVVGDVTIITNRTKVVDFTQPYVSSGLVVLTSVKRQNSGGWAFLQPFTIKMWTVTGLFFLIIGTVVWMLEHRINDEFRGPPAKQLITVFWFSFSTLF 637
BLAST of CX288476 vs. ExPASy Swiss-Prot
Match: GLR33_ARATH (Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1) HSP 1 Score: 221.09 bits (562), Expect = 4.380e-57 Identity = 100/199 (50.25%), Postives = 137/199 (68.84%), Query Frame = 3 Query: 60 TRLEASNITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSHKV-QGYCIDIFLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLF 653 T + ++ WPG PRGWV ++N + L+IGVP R S+ FV++ + + +G+CID+F A+ L+PY VP KF +G+G NPSY +V+M+ FD VGD+AIVTNRTKIVDF+QPY ++GLV+VAP + AW FL+PF MW VT F+ + +V+WILEHR ND+FRGPP+RQ T+ FSFST+F Sbjct: 437 TSPKLKHVIWPGETFTKPRGWVFSNNGKELKIGVPLRVSYKEFVSQIRGTENMFKGFCIDVFTAAVNLLPYAVPVKFIPYGNGKENPSYTHMVEMITTGNFDGVVGDVAIVTNRTKIVDFTQPYAASGLVVVAPFKKLNSGAWAFLRPFNRLMWAVTGCCFLFVGIVVWILEHRTNDEFRGPPKRQCVTILWFSFSTMF 635
BLAST of CX288476 vs. ExPASy Swiss-Prot
Match: GLR36_ARATH (Glutamate receptor 3.6 OS=Arabidopsis thaliana GN=GLR3.6 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 7.471e-57 Identity = 99/197 (50.25%), Postives = 140/197 (71.07%), Query Frame = 3 Query: 78 NITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSHKVQGYCIDIFLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTLFKTIRK 668 ++ WPG + PRGWV ++N R LRIGVP R F V+ + + + G+C+D+F+ A+ L+PY VP++ FG+G NPS LV+++ V+DA VGDI I+T RTK+ DF+QPY+ +GLV+VAP+ +SA FL+PFT +MW + AASF+++ VIW LEH+ ND+FRGPPRRQ+ T F FSFSTLF + R+ Sbjct: 435 SVVWPGHSIKIPRGWVFSNNGRHLRIGVPNRYRFEEVVSVKSNG-MITGFCVDVFIAAINLLPYAVPFELVAFGNGHDNPSNSELVRLITTGVYDAGVGDITIITERTKMADFTQPYVESGLVVVAPVRKLGSSAMAFLRPFTPQMWLIAAASFLIVGAVIWCLEHKHNDEFRGPPRRQVITTFWFSFSTLFFSHRE 630
BLAST of CX288476 vs. ExPASy Swiss-Prot
Match: GLR27_ARATH (Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3) HSP 1 Score: 171.785 bits (434), Expect = 3.047e-42 Identity = 84/194 (43.30%), Postives = 120/194 (61.86%), Query Frame = 3 Query: 81 ITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHD----SHKVQGYCIDIFLEALKLVPYDVPYKFELFGDGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASAWVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPPRRQIATMFLFSFSTL 650 + WPG + P+GW I N + LR+G+P + F+ FV + D + GYCI+IF LK +PY V K+ F N YD +V V +DA VGD+ IV NR+ VDF+ PY +G+ ++ P+ ++K + WVFL+P+++++W TA FV I ++WILEHRVN DFRGPP QI T F F+FST+ Sbjct: 440 VIWPGKSKDVPKGWQIPTNGKMLRVGIPVKKGFLEFVDAKIDPISNAMTPTGYCIEIFEAVLKKLPYSVIPKYIAFLSPDEN--YDEMVYQVYTGAYDAVVGDVTIVANRSLYVDFTLPYTESGVSMMVPLKDNK-NTWVFLRPWSLDLWVTTACFFVFIGFIVWILEHRVNTDFRGPPHHQIGTSFWFAFSTM 630
BLAST of CX288476 vs. ExPASy Swiss-Prot
Match: GLR26_ARATH (Glutamate receptor 2.6 OS=Arabidopsis thaliana GN=GLR2.6 PE=2 SV=2) HSP 1 Score: 164.466 bits (415), Expect = 4.865e-40 Identity = 86/199 (43.22%), Postives = 121/199 (60.80%), Query Frame = 3 Query: 81 ITWPGGKTETPRGWVIADNARPLRIGVPRRASFVGFVTEEHDSHK----VQGYCIDIFLEALKLVPYDVPYKFELFG--DGLSNPSYDGLVKMVANDVFDAAVGDIAIVTNRTKIVDFSQPYISTGLVIVAPINNHKASA-WVFLKPFTVEMWCVTAASFVMIAVVIWILEHRVNDDFRGPP-RRQIATMFLFSFSTLF 653 I WPG P+GW NA+ LRI VP++ F FV D++ + G+CID+F A++ +PY VPY++ F DG SYD +V V FD AVGD I+ NR+ VDF+ PY TG+V+V P+ + + WVFLKP T E+W +TAASF+ I +++WI E++ + DFR +I+ +F FSFSTLF Sbjct: 440 IIWPGDTIFVPKGWEFPTNAKKLRIAVPKKDGFNNFVEVTKDANTNAPTITGFCIDVFDTAMRQMPYAVPYEYIPFETPDGKPRGSYDEMVYHVFLGEFDGAVGDTTILANRSTYVDFALPYSETGIVVVVPVKDEREKGKWVFLKPLTRELWFLTAASFLYIGIMVWIFEYQASGDFRKQSIINKISNVFYFSFSTLF 638 The following BLAST results are available for this feature:
BLAST of CX288476 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 21
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288476 ID=CX288476; Name=CX288476; organism=Citrus clementina; type=EST; length=686bpback to top |