CX288494
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288494 vs. ExPASy Swiss-Prot
Match: VDAC1_ARATH (Mitochondrial outer membrane protein porin 1 OS=Arabidopsis thaliana GN=At3g01280 PE=1 SV=3) HSP 1 Score: 190.66 bits (483), Expect = 4.242e-48 Identity = 93/182 (51.10%), Postives = 128/182 (70.33%), Query Frame = 3 Query: 3 LFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVH 548 L+ +IGKKA+DLL KD+N+DQK SI+T+S AGVA+TST KKG L GDVA Q + KN+ D+KV T+S L T T+ E P ++I S KVPD NSGK+E+QY H++A ++++ L Q+P ++ + IG+ +A G + +DT SGNFTK AG+S TK D AS+ + DKGD + ASY H Sbjct: 7 LYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEYAGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYH 188
BLAST of CX288494 vs. ExPASy Swiss-Prot
Match: VDAC_PEA (Outer plastidial membrane protein porin OS=Pisum sativum GN=POR1 PE=1 SV=2) HSP 1 Score: 187.963 bits (476), Expect = 2.750e-47 Identity = 90/185 (48.65%), Postives = 126/185 (68.11%), Query Frame = 3 Query: 3 LFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLD 557 L+ DIGKKA+DLL KDY++D+K +ISTYS GVA+TS+ KKG L GDV Q K KN+ D+KVDT SN+ TT T+ E P KAI S KVP+ SGK+E+QY H++A +S++ L +P ++ ++ IGT ++AFGA+ +DT G TK A ++ K D S+ L +KGD + ASY H ++ Sbjct: 7 LYTDIGKKARDLLYKDYHSDKKFTISTYSPTGVAITSSGTKKGELFLGDVNTQLKNKNITTDIKVDTNSNLFTTITVNEPAPGVKAILSFKVPEQTSGKVELQYLHEYAGISSSVGLKANPIVNFSSVIGTNALAFGADISFDTKLGELTKSNAAVNFVKDDLIGSLTLNEKGDLLSASYYHAIN 191
BLAST of CX288494 vs. ExPASy Swiss-Prot
Match: VDAC1_SOLTU (Mitochondrial outer membrane protein porin of 34 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 185.267 bits (469), Expect = 1.782e-46 Identity = 91/182 (50.00%), Postives = 119/182 (65.38%), Query Frame = 3 Query: 3 LFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVH 548 L+ +IGKKA+DLL KDY +D K SI+TYS GV +TS+ KKG L DV Q K KNV D+KVDT SN+ TT T+ E P K I S +VPD SGKLEVQY HD+A +++ L +P ++ + +GT IA G + +DT +G+FTK AG+S T D AS+ L +KGD + ASY H Sbjct: 7 LYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDYAGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYH 188
BLAST of CX288494 vs. ExPASy Swiss-Prot
Match: VDAC2_SOLTU (Mitochondrial outer membrane protein porin of 36 kDa OS=Solanum tuberosum PE=1 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 5.186e-46 Identity = 88/182 (48.35%), Postives = 122/182 (67.03%), Query Frame = 3 Query: 3 LFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVH 548 L++DIGKKA+DLL +DY +D K +++TYS GVA+T++ +KKG L DV+ Q K KN+ DVKVDT SN+ TT T+ E P K I S VPD SGK+E+QY H++A ++I L SP ++ + G ++A G + +DT +GNFTK AG+S + D AS+ L DKGDT+ ASY H Sbjct: 7 LYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEYAGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYH 188
BLAST of CX288494 vs. ExPASy Swiss-Prot
Match: VDAC2_ARATH (Mitochondrial outer membrane protein porin 2 OS=Arabidopsis thaliana GN=HSR2 PE=1 SV=3) HSP 1 Score: 183.726 bits (465), Expect = 5.186e-46 Identity = 86/180 (47.78%), Postives = 118/180 (65.56%), Query Frame = 3 Query: 3 LFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASY 542 L+ +IGKKA+DLL +DY DQK S++TYS GVA+T+T KG L GDVA Q K N DVKV T+S++LTT T E P K I K+PD+ SGK EVQYFHD+A ++++ +P ++ + +GT ++ G + Y+T SGNF + AG + TK D AS+IL DKG+ + ASY Sbjct: 7 LYTEIGKKARDLLYRDYQGDQKFSVTTYSSTGVAITTTGTNKGSLFLGDVATQVKNNNFTADVKVSTDSSLLTTLTFDEPAPGLKVIVQAKLPDHKSGKAEVQYFHDYAGISTSVGFTATPIVNFSGVVGTNGLSLGTDVAYNTESGNFKHFNAGFNFTKDDLTASLILNDKGEKLNASY 186
BLAST of CX288494 vs. ExPASy Swiss-Prot
Match: VDAC1_ORYSJ (Mitochondrial outer membrane protein porin OS=Oryza sativa subsp. japonica GN=VDAC1 PE=1 SV=3) HSP 1 Score: 179.874 bits (455), Expect = 7.488e-45 Identity = 83/182 (45.60%), Postives = 126/182 (69.23%), Query Frame = 3 Query: 3 LFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEILPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVH 548 L+ +IGKKA+DLL +DY D K +++TY+ GVA+T+T+ KK L G++ +Q K KN+ DVK +++SN++TT T+ E+ P K+I S VPD SGK E+QY HD+A +++I L SP +++++ GT ++A GA+ DT +GN TKY AG+S + D AS+ L +KGD++ ASY H Sbjct: 6 LYPEIGKKARDLLYRDYQTDHKFTLTTYTSNGVAITATSTKKADLIFGEIQSQIKNKNITVDVKANSDSNVVTTVTVDELTPGLKSILSFAVPDQRSGKFELQYSHDYAGVSASIGLTASPVVNLSSVFGTKALAVGADVSLDTATGNLTKYNAGLSFSNDDLIASLNLNNKGDSLTASYYH 187
BLAST of CX288494 vs. ExPASy Swiss-Prot
Match: VDAC1_WHEAT (Mitochondrial outer membrane porin OS=Triticum aestivum GN=VDAC1 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.322e-41 Identity = 80/183 (43.72%), Postives = 120/183 (65.57%), Query Frame = 3 Query: 3 LFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEIL-PSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVH 548 L++ IGKKAKDLL +DY D K +++TY+ G A+T+T+ KK L+ G++ +Q K KN+ DVK ++ SN++TT T ++ P K I S VPD SGK+E+QY HD+A ++I L +P ++++ GT ++A GA+ DT + NF KY A +S T D AS+ L +KGD++ ASY H Sbjct: 6 LYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYLHDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYH 188
BLAST of CX288494 vs. ExPASy Swiss-Prot
Match: VDAC_MAIZE (Outer plastidial membrane protein porin OS=Zea mays GN=POR1 PE=2 SV=1) HSP 1 Score: 161.77 bits (408), Expect = 2.110e-39 Identity = 79/187 (42.25%), Postives = 120/187 (64.17%), Query Frame = 3 Query: 3 LFADIGKKAKDLLTKDYNADQKISISTYSGAGVALTSTAVKKGGLSAGDVAAQYKYKNVLFDVKVDTESNILTTFTLTEI-LPSTKAIASLKVPDYNSGKLEVQYFHDHATFTSAIALNQSPCIDVTATIGTPSIAFGAEAGYDTTSGNFTKYTAGISVTKPDSCASIILGDKGDTIRASYVHHLDN 560 L+ DIGKK +DLL KDYN QK ++T S GVA+T+ +K G++ Q K K + DVK ++ES++LTT T+ E P K+I +L VPD SGKLE QY H++A +++ LN +P ++++ G+ +++ G + +DT + +FTKY A +S+T PD AS+ L + GDT+ ASY H + N Sbjct: 7 LYTDIGKKTRDLLYKDYNTHQKFCLTTSSPNGVAITAAGTRKNESIFGELHTQIKNKKLTVDVKANSESDLLTTITVDEFGTPGLKSIINLVVPDQRSGKLEFQYLHEYAGVNASVGLNSNPMVNLSGAFGSKALSVGVDVSFDTATSDFTKYNAALSLTSPDLIASLHLNNHGDTLVASYYHLVKN 193 The following BLAST results are available for this feature:
BLAST of CX288494 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288494 ID=CX288494; Name=CX288494; organism=Citrus clementina; type=EST; length=561bpback to top |