CX288499
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288499 vs. ExPASy Swiss-Prot
Match: RNF5_HUMAN (E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5 PE=1 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 8.973e-23 Identity = 45/102 (44.12%), Postives = 69/102 (67.65%), Query Frame = 1 Query: 7 SEKKDDDEKGS----GNDGSFFDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNSTREPEEDSSLKIPLRPQGRR 300 +E++D +G G G+ F+CNICL+ +R+ VV+ CGHL+CWPCL++WL + +ECPVCK ++ + + P+YGRG+ + +D LK P RPQG+R Sbjct: 4 AEEEDGGPEGPNRERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPERQECPVCKAGISREKVVPLYGRGS---QKPQDPRLKTPPRPQGQR 102
BLAST of CX288499 vs. ExPASy Swiss-Prot
Match: RNF5_RAT (E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus GN=Rnf5 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.531e-22 Identity = 45/102 (44.12%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 7 SEKKDDDEKGS----GNDGSFFDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNSTREPEEDSSLKIPLRPQGRR 300 +E++D +G G + F+CNICL+ +R+ VV+ CGHL+CWPCL++WL D +ECPVCK ++ + + P+YGRG+ + +D LK P RPQG+R Sbjct: 4 AEEEDGGPEGPNRERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLYGRGS---QKPQDPRLKTPPRPQGQR 102
BLAST of CX288499 vs. ExPASy Swiss-Prot
Match: RNF5_MOUSE (E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5 PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.531e-22 Identity = 45/102 (44.12%), Postives = 68/102 (66.67%), Query Frame = 1 Query: 7 SEKKDDDEKGS----GNDGSFFDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNSTREPEEDSSLKIPLRPQGRR 300 +E++D +G G + F+CNICL+ +R+ VV+ CGHL+CWPCL++WL D +ECPVCK ++ + + P+YGRG+ + +D LK P RPQG+R Sbjct: 4 AEEEDGGPEGPNRERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRPDRQECPVCKAGISREKVVPLYGRGS---QKPQDPRLKTPPRPQGQR 102
BLAST of CX288499 vs. ExPASy Swiss-Prot
Match: RN185_DANRE (RING finger protein 185 OS=Danio rerio GN=rnf185 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 3.410e-22 Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 1 Query: 34 GSGNDGSFFDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNSTREPEEDSSLKIPLRPQGRRIE 306 G G S F+CNICLD S+D V++ CGHLFCWPCL++WL + + CPVCK ++ + P+YGRG++ ++D K P RPQG+R E Sbjct: 31 GGGAQDSTFECNICLDTSKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST---GQQDPREKTPPRPQGQRPE 118
BLAST of CX288499 vs. ExPASy Swiss-Prot
Match: RN185_RAT (RING finger protein 185 OS=Rattus norvegicus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.596e-22 Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 37 SGNDGSFFDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNSTREPEEDSSLKIPLRPQGRRIE 306 SG S F+CNICLD ++D V++ CGHLFCWPCL++WL + + CPVCK ++ + P+YGRG++ ++D K P RPQG+R E Sbjct: 30 SGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST---GQQDPREKTPPRPQGQRPE 116
BLAST of CX288499 vs. ExPASy Swiss-Prot
Match: RN185_PONAB (RING finger protein 185 OS=Pongo abelii GN=RNF185 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.596e-22 Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 37 SGNDGSFFDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNSTREPEEDSSLKIPLRPQGRRIE 306 SG S F+CNICLD ++D V++ CGHLFCWPCL++WL + + CPVCK ++ + P+YGRG++ ++D K P RPQG+R E Sbjct: 30 SGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST---GQQDPREKTPPRPQGQRPE 116
BLAST of CX288499 vs. ExPASy Swiss-Prot
Match: RN185_MOUSE (RING finger protein 185 OS=Mus musculus GN=Rnf185 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.596e-22 Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 37 SGNDGSFFDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNSTREPEEDSSLKIPLRPQGRRIE 306 SG S F+CNICLD ++D V++ CGHLFCWPCL++WL + + CPVCK ++ + P+YGRG++ ++D K P RPQG+R E Sbjct: 30 SGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST---GQQDPREKTPPRPQGQRPE 116
BLAST of CX288499 vs. ExPASy Swiss-Prot
Match: RN185_HUMAN (RING finger protein 185 OS=Homo sapiens GN=RNF185 PE=2 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.596e-22 Identity = 43/90 (47.78%), Postives = 61/90 (67.78%), Query Frame = 1 Query: 37 SGNDGSFFDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNSTREPEEDSSLKIPLRPQGRRIE 306 SG S F+CNICLD ++D V++ CGHLFCWPCL++WL + + CPVCK ++ + P+YGRG++ ++D K P RPQG+R E Sbjct: 30 SGGQDSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST---GQQDPREKTPPRPQGQRPE 116
BLAST of CX288499 vs. ExPASy Swiss-Prot
Match: RNF5_CAEEL (RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 2.887e-21 Identity = 45/103 (43.69%), Postives = 62/103 (60.19%), Query Frame = 1 Query: 1 EVSEKKDDDEKGSGNDGSF-FDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNSTREPEEDSSLKIPLRPQGRRIE 306 E ++ S D S F+CNICLD ++D VV+ CGHLFCWPCL +WL + + CPVCK + + PIYGRG + +P + K+P RP+G+R E Sbjct: 4 ETKAPSEEPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRPNNQVCPVCKSAIDGNKVVPIYGRGGDSSDPRK----KVPPRPKGQRSE 102
BLAST of CX288499 vs. ExPASy Swiss-Prot
Match: RN185_CHICK (RING finger protein 185 OS=Gallus gallus GN=RNF185 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.924e-21 Identity = 41/88 (46.59%), Postives = 60/88 (68.18%), Query Frame = 1 Query: 43 NDGSFFDCNICLDLSRDPVVTCCGHLFCWPCLYRWLHVHSDAKECPVCKGEVTVKNITPIYGRGNSTREPEEDSSLKIPLRPQGRRIE 306 N + F+CNICLD ++D V++ CGHLFCWPCL++WL + + CPVCK ++ + P+YGRG++ ++D K P RPQG+R E Sbjct: 34 NQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLETRPNRQVCPVCKAGISRDKVIPLYGRGST---GQQDPREKTPPRPQGQRPE 118 The following BLAST results are available for this feature:
BLAST of CX288499 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288499 ID=CX288499; Name=CX288499; organism=Citrus clementina; type=EST; length=590bpback to top |