CX288532
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_ERWCT (Bifunctional polymyxin resistance protein arnA OS=Erwinia carotovora subsp. atroseptica GN=arnA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.062e-35 Identity = 78/181 (43.09%), Postives = 108/181 (59.67%), Query Frame = 2 Query: 41 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY--AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDM 574 ED S I G I KQRW Y+ +KQL++R+I+A GA+NGL FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG +R F I D IEA+ +IEN + +G I N+GNPHNE ++R+L EM+ + + +DV S +YG+GY D R P + Sbjct: 453 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKNGLRFTLFRPFNWMGPRLD---TLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDGIEALFRVIENRNGQCDGQIINIGNPHNEASIRELGEMLLTSFNAHPLRDRFPPFAGFIDVESSSYYGKGYQDVAHRTPSI 630
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_YERE8 (Bifunctional polymyxin resistance protein arnA OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=arnA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.303e-34 Identity = 78/183 (42.62%), Postives = 110/183 (60.11%), Query Frame = 2 Query: 41 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV----DVSSKEFYGEGYDDSDKRIPDM 574 ED+S I G I KQRW Y+ +KQL++R+I+A GA+ L+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG+ +R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + K E P D+ S +YG+GY D + R P + Sbjct: 446 EDSSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKENLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGEQKRCFTDIHDGIEALFRIIENRDGACDGQIINIGNPTNEASIRELAEMLLRCFEK--HELRHNFPPFAGFKDIESSAYYGKGYQDVEYRTPSI 623
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_PROMH (Bifunctional polymyxin resistance protein arnA OS=Proteus mirabilis (strain HI4320) GN=arnA PE=3 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 2.303e-34 Identity = 76/181 (41.99%), Postives = 111/181 (61.33%), Query Frame = 2 Query: 41 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDM 574 ED S I G I KQRW Y+ +KQL++R+I+A GA+ GL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KLVDGG+ +R F I D IEA+ +IEN + +G I N+GNP NE ++R+LAEM+ + + K + G + S +YG+GY D + R P + Sbjct: 446 EDNSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRPFNWMGPRLD---NLNSARIGSSRAITQLILNLVEGSPIKLVDGGEQKRCFTDINDGIEALFRIIENRDNKCDGQIINIGNPTNEASIRELAEMLLDCFEKHELRGHFPPFAGFKKIESSSYYGKGYQDVEHRKPSI 623
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_PECCP (Bifunctional polymyxin resistance protein arnA OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=arnA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 3.929e-34 Identity = 76/181 (41.99%), Postives = 108/181 (59.67%), Query Frame = 2 Query: 41 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVY--AKVSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDM 574 ED S I G I KQRW Y+ +KQL++R+I+A GA+NGL FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG +R F I D IEA+ +IEN + +G I N+GNPHNE ++R+L +M+ + + ++V S +YG+GY D R P + Sbjct: 452 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKNGLRFTLFRPFNWMGPRLD---TLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDGIEALFRIIENRNGQCDGQIINIGNPHNEASIRELGDMLLTSFNAHPLRDRFPPFAGFIEVESSSYYGKGYQDVAHRTPSI 629
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_SERP5 (Bifunctional polymyxin resistance protein arnA OS=Serratia proteamaculans (strain 568) GN=arnA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 8.753e-34 Identity = 77/181 (42.54%), Postives = 108/181 (59.67%), Query Frame = 2 Query: 41 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDM 574 ED S I G I KQRW Y+ +KQL++R+I+A GA+ GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KL+DGG +R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ E + + DV S +YG+GY D + R P + Sbjct: 446 EDHSRLIVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQKRCFTDINDGIEALFRIIENRDGLCDGQIVNIGNPTNEASIRELAEMLLESFNNHPLRDRFPPFAGFKDVESSSYYGKGYQDVEHRTPSI 623
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_KLEP7 (Bifunctional polymyxin resistance protein arnA OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=arnA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 2.547e-33 Identity = 72/181 (39.78%), Postives = 112/181 (61.88%), Query Frame = 2 Query: 41 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDM 574 ED+S + G I KQRW Y+ +KQL++R+I+A G +NGL+FT+ RPFNW+GPR+D ++ G R + NL+ P+KL++GG+ +R F I D IEA+ +IEN R +G I N+GNP NE ++++LAEM+ + + + +V S ++YG+GY D + R P + Sbjct: 446 EDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKNGLKFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIEGGKQKRCFTDISDGIEALFRIIENKDGRCDGQIINIGNPDNEASIKELAEMLLACFERHPLRDRFPPFAGFREVESSDYYGKGYQDVEHRKPSI 623
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_ERWT9 (Bifunctional polymyxin resistance protein arnA OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=arnA PE=3 SV=1) HSP 1 Score: 141.354 bits (355), Expect = 3.326e-33 Identity = 73/181 (40.33%), Postives = 110/181 (60.77%), Query Frame = 2 Query: 41 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIENPAR-ANGHIFNVGNPHNEVTVRQLAEMMTEVYAK--VSGEAALEEPTVDVSSKEFYGEGYDDSDKRIPDM 574 ED+S + G I KQRW Y+ +KQL++R+I+A G + GL FT+ RPFNW+GPR+D ++ G R + NL+ P+KL+DGG+ +R F I D IEA+ L+IEN + +G I N+GNP NE +++QLAE + E + + + +V S +YG+GY D + R P + Sbjct: 446 EDSSNLVVGPINKQRWIYSVSKQLLDRVIWAYGDKEGLRFTLFRPFNWMGPRLD---NLNAARIGSSRAITQLILNLVEGSPIKLIDGGRQKRCFTDIHDGIEALFLIIENKQKNCDGQIINIGNPENEASIKQLAEQLLESFERHPLRDRFPPFAGFREVESSTYYGKGYQDVEHRKPSI 623
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_YERPY (Bifunctional polymyxin resistance protein arnA OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=arnA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.344e-33 Identity = 77/183 (42.08%), Postives = 108/183 (59.02%), Query Frame = 2 Query: 41 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV----DVSSKEFYGEGYDDSDKRIPDM 574 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG +R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + + E P D+ S +YG+GY D + R P + Sbjct: 446 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDGIEALFRIIENRDGCCDGQIINIGNPTNEASIRELAEMLLTSFE--NHELRDHFPPFAGFKDIESSAYYGKGYQDVEYRTPSI 623
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_YERPS (Bifunctional polymyxin resistance protein arnA OS=Yersinia pseudotuberculosis GN=arnA PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.344e-33 Identity = 77/183 (42.08%), Postives = 108/183 (59.02%), Query Frame = 2 Query: 41 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV----DVSSKEFYGEGYDDSDKRIPDM 574 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG +R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + + E P D+ S +YG+GY D + R P + Sbjct: 446 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDGIEALFRIIENRDGCCDGQIINIGNPTNEASIRELAEMLLTSFE--NHELRDHFPPFAGFKDIESSAYYGKGYQDVEYRTPSI 623
BLAST of CX288532 vs. ExPASy Swiss-Prot
Match: ARNA_YERPP (Bifunctional polymyxin resistance protein arnA OS=Yersinia pestis (strain Pestoides F) GN=arnA PE=3 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.344e-33 Identity = 77/183 (42.08%), Postives = 108/183 (59.02%), Query Frame = 2 Query: 41 EDASPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRRQPLKLVDGGQSQRTFIYIKDAIEAVLLMIEN-PARANGHIFNVGNPHNEVTVRQLAEMMTEVYAKVSGEAALEEPTV----DVSSKEFYGEGYDDSDKRIPDM 574 ED S I G I KQRW Y+ +KQL++R+I+A G + GL+FT+ RPFNW+GPR+D +D G R + NL+ P+KLVDGG +R F I D IEA+ +IEN +G I N+GNP NE ++R+LAEM+ + + E P D+ S +YG+GY D + R P + Sbjct: 446 EDTSRLIVGPINKQRWIYSVSKQLLDRVIWAYGVKEGLKFTLFRPFNWMGPRLD---NLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKRCFTDIHDGIEALFRIIENRDGCCDGRIINIGNPTNEASIRELAEMLLTSFE--NHELRDHFPPFAGFKDIESSAYYGKGYQDVEYRTPSI 623 The following BLAST results are available for this feature:
BLAST of CX288532 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288532 ID=CX288532; Name=CX288532; organism=Citrus clementina; type=EST; length=592bpback to top |