CX288546

Overview
NameCX288546
Unique NameCX288546
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length653
Libraries
Library NameType
IF1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15051 contig Ccv1_Contig15051:60..713. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX288546 vs. ExPASy Swiss-Prot
Match: ADK2_ARATH (Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.755e-50
Identity = 92/112 (82.14%), Postives = 106/112 (94.64%), Query Frame = 2
Query:    2 HGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEFN 337
            HGWET++VE+IA+KISQ PKA+GT+KR TVITQGADPVVVAEDGKVK +PVI LPKEKLVDTNGAGDAFVGGF+SQLV+EK +E+CV+AGCYA+NVVIQRSGCTYP KP+FN
Sbjct:  234 HGWETEDVEQIAIKISQLPKATGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFMSQLVKEKSIEECVKAGCYASNVVIQRSGCTYPEKPDFN 345          
BLAST of CX288546 vs. ExPASy Swiss-Prot
Match: ADK1_ARATH (Adenosine kinase 1 OS=Arabidopsis thaliana GN=ADK1 PE=1 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 4.755e-50
Identity = 94/112 (83.93%), Postives = 104/112 (92.86%), Query Frame = 2
Query:    2 HGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEFN 337
            HGWETD+VE+IA+K+SQ PKASGT+KR TVITQGADPVVVAEDGKVK +PVI LPKEKLVDTNGAGDAFVGGFLSQLV  K +E+CVRAGCYA+NVVIQRSGCTYP KP+FN
Sbjct:  233 HGWETDDVEQIAIKMSQLPKASGTYKRTTVITQGADPVVVAEDGKVKKYPVIPLPKEKLVDTNGAGDAFVGGFLSQLVHGKGIEECVRAGCYASNVVIQRSGCTYPEKPDFN 344          
BLAST of CX288546 vs. ExPASy Swiss-Prot
Match: ADK_PHYPA (Adenosine kinase OS=Physcomitrella patens GN=ADK PE=1 SV=1)

HSP 1 Score: 160.229 bits (404), Expect = 8.413e-39
Identity = 75/110 (68.18%), Postives = 89/110 (80.91%), Query Frame = 2
Query:    5 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEF 334
            GWET++ + IA+K++  PKA GTHKR+ VITQG DP +VAEDGKV  FPV  +PKEKLVDTN AGD+FVGGFLSQLV  K +  CVRAG YAA+V+IQRSGCT+P KP F
Sbjct:  231 GWETEDTKVIAVKLAALPKAGGTHKRVAVITQGTDPTIVAEDGKVTEFPVTPIPKEKLVDTNAAGDSFVGGFLSQLVLGKDIAQCVRAGNYAASVIIQRSGCTFPSKPSF 340          
BLAST of CX288546 vs. ExPASy Swiss-Prot
Match: ADK_MOUSE (Adenosine kinase OS=Mus musculus GN=Adk PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.218e-29
Identity = 58/111 (52.25%), Postives = 83/111 (74.77%), Query Frame = 2
Query:    5 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEFN 337
            G+ET +++EIA K    PK +   +R  + TQG D  +VA +  V  FPV+   +E+++DTNGAGDAFVGGFLSQLV +KP+ +C+RAG YAA+V+I+R+GCT+P KP+F+
Sbjct:  251 GFETKDIKEIAKKAQALPKVNSKRQRTVIFTQGRDDTIVAAENDVTAFPVLDQNQEEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361          
BLAST of CX288546 vs. ExPASy Swiss-Prot
Match: ADK_RAT (Adenosine kinase OS=Rattus norvegicus GN=Adk PE=1 SV=3)

HSP 1 Score: 128.257 bits (321), Expect = 3.543e-29
Identity = 59/111 (53.15%), Postives = 81/111 (72.97%), Query Frame = 2
Query:    5 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEFN 337
            G+ET +++EIA K    PK +   +R  + TQG D  +VA    V  FPV+   +E++VDTNGAGDAFVGGFLSQLV  KP+ +C+RAG YAA+V+I+R+GCT+P KP+F+
Sbjct:  251 GFETKDIKEIARKTQALPKVNSKRQRTVIFTQGRDDTIVATGNDVTAFPVLDQNQEEIVDTNGAGDAFVGGFLSQLVSNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361          
BLAST of CX288546 vs. ExPASy Swiss-Prot
Match: ADK_HUMAN (Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.346e-28
Identity = 55/111 (49.55%), Postives = 84/111 (75.68%), Query Frame = 2
Query:    5 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEFN 337
            G+ET +++EIA K    PK +   +RI + TQG D  ++A + +V  F V+   +++++DTNGAGDAFVGGFLSQLV +KP+ +C+RAG YAA+++I+R+GCT+P KP+F+
Sbjct:  252 GFETKDIKEIAKKTQALPKMNSKRQRIVIFTQGRDDTIMATESEVTAFAVLDQDQKEIIDTNGAGDAFVGGFLSQLVSDKPLTECIRAGHYAASIIIRRTGCTFPEKPDFH 362          
BLAST of CX288546 vs. ExPASy Swiss-Prot
Match: ADK_CRIGR (Adenosine kinase OS=Cricetulus griseus GN=ADK PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 3.316e-27
Identity = 57/111 (51.35%), Postives = 80/111 (72.07%), Query Frame = 2
Query:    5 GWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYPPKPEFN 337
            G+ET +++EIA K     K +    R  V TQG D  VVA + +V  F V+   +++++DTNGAGDAFVGGFLSQLV  KP+ +C+RAG YAA+V+I+R+GCT+P KP+F+
Sbjct:  251 GFETKDIKEIAKKAQALAKVNSKRPRTVVFTQGRDDTVVATENEVMAFAVLDQNQKEIIDTNGAGDAFVGGFLSQLVYNKPLTECIRAGHYAASVIIRRTGCTFPEKPDFH 361          
BLAST of CX288546 vs. ExPASy Swiss-Prot
Match: ADK_SCHPO (Adenosine kinase OS=Schizosaccharomyces pombe GN=ado1 PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 5.669e-19
Identity = 50/112 (44.64%), Postives = 71/112 (63.39%), Query Frame = 2
Query:    2 HGWETDNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYP-PKPEF 334
            HG ++ +V+EIAL +S   K +    R+ VITQGAD  +VA+DGKV  +    +P E++VDTNGAGDAF GGF++ L Q + ++  V  G +     I+ SG T P PK +F
Sbjct:  226 HGIKSTDVQEIALALSSVEKVNKKRTRVVVITQGADATIVAKDGKVTTYKPNRVPSEEIVDTNGAGDAFAGGFIAALSQGQGIDYAVTLGHWLGQECIKVSGTTLPLPKKQF 337          
BLAST of CX288546 vs. ExPASy Swiss-Prot
Match: ADK_SCHCO (Adenosine kinase OS=Schizophyllum commune GN=ADK PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.649e-13
Identity = 40/95 (42.11%), Postives = 57/95 (60.00%), Query Frame = 2
Query:   32 IALKISQWPKASGTHKRITVITQGADPVVV---AEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSG 307
            +A  ++  PK +    R+ + T GA+  VV   AE G+V+ F V  L + ++VDTNGAGDAF GGFL  LV  + ++D V AG   A + IQ+ G
Sbjct:  239 VAKSLAMQPKTNPARPRVVIFTHGAEETVVVNSAEPGRVRTFKVDKLAEGEIVDTNGAGDAFAGGFLGALVAGRELDDSVEAGHKLAKISIQQIG 333          
BLAST of CX288546 vs. ExPASy Swiss-Prot
Match: ADK_DICDI (Adenosine kinase OS=Dictyostelium discoideum GN=adk PE=3 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.013e-12
Identity = 38/109 (34.86%), Postives = 62/109 (56.88%), Query Frame = 2
Query:   17 DNVEEIALKISQWPKASGTHKRITVITQGADPVVVAEDGKVKLFPVILLPKEKLVDTNGAGDAFVGGFLSQLVQEKPVEDCVRAGCYAANVVIQRSGCTYP---PKPEF 334
            +++  IA K++ W K +    R  V TQG D  +V ++G +  +  I +  E ++D N AGD+F GGFL+     + +  CV AG YA+  +I+++G T P   PK +F
Sbjct:  232 EDLTVIAEKLAAWEKVNTKRTRTVVFTQGPDATLVFQNGVLTKYNPIKVATEDILDLNAAGDSFCGGFLAAYSNGQEIAKCVEAGHYASWEIIRQNGATVPASEPKIQF 340          
The following BLAST results are available for this feature:
BLAST of CX288546 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
ADK2_ARATH4.755e-5082.14Adenosine kinase 2 OS=Arabidopsis thaliana GN=ADK2... [more]
ADK1_ARATH4.755e-5083.93Adenosine kinase 1 OS=Arabidopsis thaliana GN=ADK1... [more]
ADK_PHYPA8.413e-3968.18Adenosine kinase OS=Physcomitrella patens GN=ADK P... [more]
ADK_MOUSE1.218e-2952.25Adenosine kinase OS=Mus musculus GN=Adk PE=1 SV=2[more]
ADK_RAT3.543e-2953.15Adenosine kinase OS=Rattus norvegicus GN=Adk PE=1 ... [more]
ADK_HUMAN1.346e-2849.55Adenosine kinase OS=Homo sapiens GN=ADK PE=1 SV=2[more]
ADK_CRIGR3.316e-2751.35Adenosine kinase OS=Cricetulus griseus GN=ADK PE=1... [more]
ADK_SCHPO5.669e-1944.64Adenosine kinase OS=Schizosaccharomyces pombe GN=a... [more]
ADK_SCHCO4.649e-1342.11Adenosine kinase OS=Schizophyllum commune GN=ADK P... [more]
ADK_DICDI3.013e-1234.86Adenosine kinase OS=Dictyostelium discoideum GN=ad... [more]
back to top
Properties
Property NameValue
Genbank descriptionC02001F05SK IF1 Citrus clementina cDNA clone C02001F05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX288546 ID=CX288546; Name=CX288546; organism=Citrus clementina; type=EST; length=653bp
TCATGGCTGGGAGACTGACAATGTCGAGGAGATTGCTCTGAAGATTTCTC
AGTGGCCCAAGGCATCAGGAACACACAAGAGGATCACTGTTATCACCCAA
GGTGCTGACCCTGTTGTGGTTGCTGAAGATGGGAAGGTGAAATTATTCCC
TGTGATCTTGCTACCCAAGGAAAAATTGGTTGATACTAATGGAGCAGGGG
ATGCATTTGTCGGAGGATTTTTGTCACAGTTGGTTCAAGAGAAGCCAGTG
GAAGATTGTGTGAGAGCTGGTTGCTATGCGGCAAATGTTGTAATCCAAAG
GTCAGGCTGCACTTACCCCCCAAAACCTGAATTCAATTAGGCTGATTCCT
CATTGCAAGAATCTCTTGCGGCCTCTGCTATTGTCAGTTTTCTTCCGCTG
TTTCTTCATTTTTCAAACTTGATTAAGGGGCCTGTATTATTTAATCAAGG
AGTTATTTCAATGTTGAATTTGTTTGTGATACTCTGTCCACCATGTGGAT
AAGAATACATGACATTTACTTACAGAGGGAATGGATTTTCCATTTAAATA
CCTTAAATGTTGAATTTGTTTGTGTACTCTGTCCACCATGTGGATAAGAA
TACGTGACATTTACTTACAGAGGGAATGGATTTTCCATTTAAATACCTAA
AAT
back to top