CX288560
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP15_ARATH (Probable aquaporin PIP1-5 OS=Arabidopsis thaliana GN=PIP1-5 PE=2 SV=2) HSP 1 Score: 193.356 bits (490), Expect = 4.185e-49 Identity = 92/96 (95.83%), Postives = 94/96 (97.92%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 289 YTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYNKD AWDDHWIFW GPFIGAALAALYHQIVIRAIPFKSK Sbjct: 191 YTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKSK 286
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP14_ARATH (Probable aquaporin PIP1-4 OS=Arabidopsis thaliana GN=PIP1.4 PE=1 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 9.323e-49 Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 289 YTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYNKD +WDDHWIFW GPFIGAALAALYHQIVIRAIPFKSK Sbjct: 191 YTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWIFWVGPFIGAALAALYHQIVIRAIPFKSK 286
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP13_ARATH (Aquaporin PIP1-3 OS=Arabidopsis thaliana GN=PIP1-3 PE=1 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 1.590e-48 Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 289 YTVFSATDAKR+ARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYNKD AWDDHWIFW GPFIGAALAALYHQ+VIRAIPFKS+ Sbjct: 190 YTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWDDHWIFWVGPFIGAALAALYHQLVIRAIPFKSR 285
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP11_ORYSJ (Aquaporin PIP1-1 OS=Oryza sativa subsp. japonica GN=PIP1-1 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 3.543e-48 Identity = 87/96 (90.62%), Postives = 94/96 (97.92%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 289 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYNKD AW+DHWIFW GPF+GAALAA+YHQ++IRAIPFKS+ Sbjct: 193 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHAWNDHWIFWVGPFVGAALAAIYHQVIIRAIPFKSR 288
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP12_MAIZE (Aquaporin PIP1-2 OS=Zea mays GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 6.043e-48 Identity = 87/96 (90.62%), Postives = 94/96 (97.92%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 289 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYN+D AW+DHWIFW GPFIGAALAA+YHQ++IRAIPFKS+ Sbjct: 193 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWNDHWIFWVGPFIGAALAAIYHQVIIRAIPFKSR 288
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP12_ARATH (Aquaporin PIP1-2 OS=Arabidopsis thaliana GN=PIP1-2 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 6.043e-48 Identity = 89/96 (92.71%), Postives = 93/96 (96.88%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 289 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+I+NKD AWDDHW+FW GPFIGAALAALYH IVIRAIPFKS+ Sbjct: 190 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNKDNAWDDHWVFWVGPFIGAALAALYHVIVIRAIPFKSR 285
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP11_VICFA (Aquaporin PIP1.1 OS=Vicia faba GN=PIP1.1 PE=2 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 6.043e-48 Identity = 88/96 (91.67%), Postives = 93/96 (96.88%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 289 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYNKD +WDDHW+FW GPFIGAALAALYH +VIRAIPFKS+ Sbjct: 190 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKSR 285
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP11_ARATH (Aquaporin PIP1-1 OS=Arabidopsis thaliana GN=PIP1-1 PE=1 SV=1) HSP 1 Score: 189.504 bits (480), Expect = 6.043e-48 Identity = 88/96 (91.67%), Postives = 93/96 (96.88%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 289 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYNKD +WDDHW+FW GPFIGAALAALYH +VIRAIPFKS+ Sbjct: 190 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKDHSWDDHWVFWVGPFIGAALAALYHVVVIRAIPFKSR 285
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP13_MAIZE (Aquaporin PIP1-3/PIP1-4 OS=Zea mays GN=PIP1-3 PE=2 SV=1) HSP 1 Score: 189.119 bits (479), Expect = 7.892e-48 Identity = 87/96 (90.62%), Postives = 93/96 (96.88%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 289 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYN+D AW DHWIFW GPFIGAALAA+YHQ++IRAIPFKS+ Sbjct: 196 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRDHAWSDHWIFWVGPFIGAALAAIYHQVIIRAIPFKSR 291
BLAST of CX288560 vs. ExPASy Swiss-Prot
Match: PIP12_ORYSJ (Probable aquaporin PIP1-2 OS=Oryza sativa subsp. japonica GN=PIP1-2 PE=2 SV=3) HSP 1 Score: 189.119 bits (479), Expect = 7.892e-48 Identity = 88/96 (91.67%), Postives = 93/96 (96.88%), Query Frame = 2 Query: 2 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAALIYNKDQAWDDHWIFWAGPFIGAALAALYHQIVIRAIPFKSK 289 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAA+IYN+ AWDDHWIFW GPFIGAALAA+YHQ+VIRAIPFKS+ Sbjct: 192 YTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNRGHAWDDHWIFWVGPFIGAALAAIYHQVVIRAIPFKSR 287 The following BLAST results are available for this feature:
BLAST of CX288560 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 81
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288560 ID=CX288560; Name=CX288560; organism=Citrus clementina; type=EST; length=467bpback to top |