CX288572
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GLYR1_RAT (Putative oxidoreductase GLYR1 OS=Rattus norvegicus GN=Glyr1 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.477e-48 Identity = 94/181 (51.93%), Postives = 125/181 (69.06%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSG 554 I NLL+ G VTVWNRT KCD + GA +G +PAEV+ C IT ++DP AA +V GVL+ I PGK Y+DMSTVD +T ++++ I S+GG FLEAPVSG++Q + G LVIL+AG++ LY++ S +GK +FFLGEVGN AKM L+VNM+ G M T +EGL LA+ +G Sbjct: 281 IVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG 461
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GLYR1_CHICK (Putative oxidoreductase GLYR1 OS=Gallus gallus GN=GLYR1 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.477e-48 Identity = 94/181 (51.93%), Postives = 125/181 (69.06%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSG 554 I NLL+ G VTVWNRT KCD + GA +G +PAEV+ C IT ++DP AA +V GVL+ I PGK Y+DMSTVD +T ++++ I S+GG FLEAPVSG++Q + G LVIL+AG++ LY++ S +GK +FFLGEVGN AKM L+VNM+ G M T +EGL LA+ +G Sbjct: 282 IVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG 462
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GLYR1_BOVIN (Putative oxidoreductase GLYR1 OS=Bos taurus GN=GLYR1 PE=2 SV=1) HSP 1 Score: 192.2 bits (487), Expect = 1.477e-48 Identity = 94/181 (51.93%), Postives = 125/181 (69.06%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSG 554 I NLL+ G VTVWNRT KCD + GA +G +PAEV+ C IT ++DP AA +V GVL+ I PGK Y+DMSTVD +T ++++ I S+GG FLEAPVSG++Q + G LVIL+AG++ LY++ S +GK +FFLGEVGN AKM L+VNM+ G M T +EGL LA+ +G Sbjct: 282 IVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG 462
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GLYR1_HUMAN (Putative oxidoreductase GLYR1 OS=Homo sapiens GN=GLYR1 PE=1 SV=3) HSP 1 Score: 191.43 bits (485), Expect = 2.520e-48 Identity = 94/181 (51.93%), Postives = 124/181 (68.51%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSG 554 I NLL+ G VTVWNRT KCD + GA +G +PAEV+ C IT ++DP AA +V GVL+ I PGK Y+DMSTVD +T ++++ I S+GG FLEAPVSG++Q + G LVIL+AG++ LY++ S +GK +FFLGEVGN AKM L+VNM+ G M T +EGL LA +G Sbjct: 282 IVSNLLKMGHTVTVWNRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAHVTG 462
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GLYR1_XENTR (Putative oxidoreductase GLYR1 OS=Xenopus tropicalis GN=glyr1 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 2.133e-47 Identity = 92/181 (50.83%), Postives = 125/181 (69.06%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSG 554 I NLL+ G VTVWNRT KCD + GA +G +PAEV+ C IT +ADP AA +V GVL+ I PGK Y+DMSTVD ET ++++ I S+GG FLEAPVSG++Q + G LVIL+AG++ +Y++ S +GK +FFLGEVGN A+M L++NM+ G M T +EG+ LA+ +G Sbjct: 263 IVSNLLKMGHTVTVWNRTAEKCDLFIQEGAHMGRTPAEVVSTCDITFACVADPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDPETVAELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDQGVYEDCSSCFLAMGKTSFFLGEVGNAARMMLILNMVQGSFMATIAEGMTLAQVTG 443
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GLYR1_PONAB (Putative oxidoreductase GLYR1 OS=Pongo abelii GN=GLYR1 PE=2 SV=2) HSP 1 Score: 187.193 bits (474), Expect = 4.752e-47 Identity = 92/181 (50.83%), Postives = 124/181 (68.51%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSG 554 I NLL+ G VTVW+RT KCD + GA +G +PAEV+ C IT ++DP AA +V GVL+ I P K Y+DMSTVD +T ++++ I S+GG FLEAPVSG++Q + G LVIL+AG++ LY++ S +GK +FFLGEVGN AKM L+VNM+ G M T +EGL LA+ +G Sbjct: 282 IVSNLLKMGHTVTVWDRTAEKCDLFIQEGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPRKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG 462
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GLYR1_DANRE (Putative oxidoreductase GLYR1 OS=Danio rerio GN=glyr1 PE=2 SV=1) HSP 1 Score: 184.496 bits (467), Expect = 3.080e-46 Identity = 90/179 (50.28%), Postives = 125/179 (69.83%), Query Frame = 3 Query: 21 NLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFL-GEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSG 554 NLL+ G VTVWNRT KCD + GA +G +PAEV+ C IT ++DP AA +V GVL+ I PGK Y++MSTVD ET ++S+ ITS+GG FLEAPVSGS+Q + G LVI++AG++++Y++ S +GK +FF+ GE GN A+M L++NM+ G M T +EGL LA+ +G Sbjct: 193 NLLKMGHVVTVWNRTAEKCDLFIQEGARLGRTPAEVVSMCDITFSCVSDPKAARDLVLGPSGVLQGIRPGKCYVEMSTVDPETITELSQVITSRGGRFLEAPVSGSQQLSNDGMLVIVAAGDRSVYEDCSSCFQAMGKTSFFIAGEAGNAARMMLILNMVQGSFMATIAEGLTLAQATG 371
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GLYR1_MOUSE (Putative oxidoreductase GLYR1 OS=Mus musculus GN=Glyr1 PE=2 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 5.809e-45 Identity = 92/181 (50.83%), Postives = 122/181 (67.40%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSG 554 I NLL+ G VTVWNRT K GA +G +PAEV+ C IT ++DP AA +V GVL+ I PGK Y+DMSTVD +T ++++ I S+GG FLEAPVSG++Q + G LVIL+AG++ LY++ S +GK +FFLGEVGN AKM L+VNM+ G M T +EGL LA+ +G Sbjct: 281 IVSNLLKMGHTVTVWNRTAEK------EGARLGRTPAEVVSTCDITFACVSDPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSRGGRFLEAPVSGNQQLSNDGMLVILAAGDRGLYEDCSSCFQAMGKTSFFLGEVGNAAKMMLIVNMVQGSFMATIAEGLTLAQVTG 455
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GLYR1_AEDAE (Putative oxidoreductase GLYR1 homolog OS=Aedes aegypti GN=AAEL006684 PE=3 SV=1) HSP 1 Score: 162.925 bits (411), Expect = 9.597e-40 Identity = 80/179 (44.69%), Postives = 115/179 (64.25%), Query Frame = 3 Query: 21 NLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGL 557 NLL +G V VWNRT +KC + GA V +P++VI+ +T +ADP A +VF GV+ GKGY++M+ VD ETS I+ I +KGG +LEA + GSK AE G L+IL+AGE+ L++E + I + +F++G+VGN KM LV+ MI G M+ +EGL LA+++GL Sbjct: 291 NLLNSGHSVVVWNRTATKCRKFQEAGAEVADTPSDVIEMTDVTFSCVADPQVAKELVFGNCGVMSANLVGKGYVEMTGVDPETSHDIAEQIIAKGGRYLEAQIQGSKNQAEEGTLIILAAGERLLFEECQTCFEAISRNSFYMGDVGNATKMNLVLQMISGVMLAGIAEGLALADRAGL 469
BLAST of CX288572 vs. ExPASy Swiss-Prot
Match: GLYR1_ANOGA (Putative oxidoreductase GLYR1 homolog OS=Anopheles gambiae GN=AGAP009949 PE=3 SV=5) HSP 1 Score: 155.606 bits (392), Expect = 1.532e-37 Identity = 75/182 (41.21%), Postives = 115/182 (63.19%), Query Frame = 3 Query: 12 ISMNLLRNGFKVTVWNRTLSKCDELVAHGATVGGSPAEVIKKCTITIGMLADPAAALSVVFDKGGVLEQICPGKGYIDMSTVDHETSIKISRAITSKGGHFLEAPVSGSKQPAETGQLVILSAGEKALYDEAISALNVIGKKAFFLGEVGNGAKMKLVVNMIMGCMMNTFSEGLVLAEKSGL 557 I NL+++G V VWNR+ KC + GA V +P++V++ +T ++DP A +VF GV+ GKGY++M+ VD ETS I+ AI SKGG +LEA + GSK AE G L+IL++G++ L++E S I + +F+LG+VGN KM L++ MI G + +E + LA+++GL Sbjct: 295 IVKNLIKSGHSVVVWNRSAHKCRKFQEVGAEVADTPSDVVEMTDVTYSCVSDPQVAKDMVFGNCGVMSANLAGKGYVEMTGVDPETSNDINEAIISKGGRYLEAQIQGSKNQAEEGTLIILASGDRLLFEECQSCFEAISRNSFYLGDVGNATKMNLILQMISGITLAGVAEAMALADRAGL 476 The following BLAST results are available for this feature:
BLAST of CX288572 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288572 ID=CX288572; Name=CX288572; organism=Citrus clementina; type=EST; length=564bpback to top |