CX288601
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288601 vs. ExPASy Swiss-Prot
Match: CYSPL_SOLLC (Low-temperature-induced cysteine proteinase (Fragment) OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 3.545e-27 Identity = 49/65 (75.38%), Postives = 55/65 (84.62%), Query Frame = 1 Query: 7 SCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQG 201 SCF+WGCCPLE ATCC+DHYSCCPHDYPICNVR GTC MSK NPLGV+A++R A+P A GN G Sbjct: 277 SCFSWGCCPLEGATCCEDHYSCCPHDYPICNVRQGTCSMSKGNPLGVKAMKRILAQPIGAFGNGG 341
BLAST of CX288601 vs. ExPASy Swiss-Prot
Match: ORYA_ORYSJ (Oryzain alpha chain OS=Oryza sativa subsp. japonica GN=Os04g0650000 PE=1 SV=2) HSP 1 Score: 117.472 bits (293), Expect = 3.920e-26 Identity = 46/59 (77.97%), Postives = 53/59 (89.83%), Query Frame = 1 Query: 1 GNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKP 177 G C+AWGCCPLE ATCCDDHYSCCPH+YPICNV+ GTCLM+KD+PL V+AL+RT AKP Sbjct: 386 GKYCYAWGCCPLEGATCCDDHYSCCPHEYPICNVQQGTCLMAKDSPLAVKALKRTLAKP 444
BLAST of CX288601 vs. ExPASy Swiss-Prot
Match: RD21A_ARATH (Cysteine proteinase RD21a OS=Arabidopsis thaliana GN=RD21A PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 5.119e-26 Identity = 43/66 (65.15%), Postives = 56/66 (84.85%), Query Frame = 1 Query: 1 GNSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAKPYWAHGNQ 198 G CFAWGCCPLEAATCCDD+YSCCPH+YP+C++ GTCL+SK++P V+AL+R PA P+W+ G + Sbjct: 394 GKYCFAWGCCPLEAATCCDDNYSCCPHEYPVCDLDQGTCLLSKNSPFSVKALKRKPATPFWSQGRK 459
BLAST of CX288601 vs. ExPASy Swiss-Prot
Match: ORYB_ORYSJ (Oryzain beta chain OS=Oryza sativa subsp. japonica GN=Os04g0670200 PE=1 SV=2) HSP 1 Score: 98.5969 bits (244), Expect = 1.884e-20 Identity = 39/57 (68.42%), Postives = 45/57 (78.95%), Query Frame = 1 Query: 4 NSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRALRRTPAK 174 N C WGCCP+E ATCC DH SCCP DYP+CN RAGTC SK++PL V+AL+RT AK Sbjct: 406 NLCLVWGCCPVEGATCCKDHASCCPPDYPVCNTRAGTCSASKNSPLSVKALKRTLAK 462
BLAST of CX288601 vs. ExPASy Swiss-Prot
Match: CYSP1_ORYSJ (Cysteine protease 1 OS=Oryza sativa subsp. japonica GN=CP1 PE=2 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 1.825e-15 Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 1 Query: 4 NSCFAWGCCPLEAATCCDDHYSCCPHDYPICNVRAGTCLMSKDNPLGVRA----LRRTPAKP 177 N C WGCCP+E ATCC DH +CCP +YP+CN +A TC SK++P +R R P +P Sbjct: 415 NHCIVWGCCPVEGATCCKDHSTCCPKEYPVCNAKARTCSKSKNSPYNIRTPAAMARSVPEQP 476 The following BLAST results are available for this feature:
BLAST of CX288601 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288601 ID=CX288601; Name=CX288601; organism=Citrus clementina; type=EST; length=522bpback to top |