CX288616
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288616 vs. ExPASy Swiss-Prot
Match: Y8111_DICDI (DNA-binding protein DDB_G0278111 OS=Dictyostelium discoideum GN=DDB_G0278111 PE=3 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 2.521e-19 Identity = 53/115 (46.09%), Postives = 76/115 (66.09%), Query Frame = 3 Query: 177 QELMAQQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLLEXXXXXXXXXXXXXXXRRRSVLEDDD 521 Q+L QG G ++Q Q+AQ ++EA+ERRQ +L QIL+ +ARERL+RI +VKPEK+R +ED+I+R+AQ GQ+ E+V + +LISLLE +R +EDDD Sbjct: 9 QQLSQMQGQGFDPEAQQRQEAQ---RQEANERRQGILIQILTPDARERLSRITIVKPEKSRQIEDLIIRAAQTGQLTERVDDAKLISLLE---QLSEKTKKTTITMKRRTIEDDD 117
BLAST of CX288616 vs. ExPASy Swiss-Prot
Match: PDCD5_PONAB (Programmed cell death protein 5 OS=Pongo abelii GN=PDCD5 PE=2 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 1.807e-17 Identity = 50/129 (38.76%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 135 MADPELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLLEXXXXXXXXXXXXXXXRRRSVLEDDD 521 MAD ELEA+R++R+ EL A+ G + AQ++AK E R +L+Q+L AR RL+ +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI +L+ RR+ + D+D Sbjct: 1 MADEELEALRRQRLAELQAKHG-------DPGDAAQQEAKHREAEMRNSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVSQQTEKTTTVKFNRRKVMDSDED 122
BLAST of CX288616 vs. ExPASy Swiss-Prot
Match: PDCD5_HUMAN (Programmed cell death protein 5 OS=Homo sapiens GN=PDCD5 PE=1 SV=3) HSP 1 Score: 88.9669 bits (219), Expect = 1.807e-17 Identity = 50/129 (38.76%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 135 MADPELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLLEXXXXXXXXXXXXXXXRRRSVLEDDD 521 MAD ELEA+R++R+ EL A+ G + AQ++AK E R +L+Q+L AR RL+ +ALVKPEK + VE+ +++ A+ GQ+ EKVSE+ LI +L+ RR+ + D+D Sbjct: 1 MADEELEALRRQRLAELQAKHG-------DPGDAAQQEAKHREAEMRNSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSEKVSEQGLIEILKKVSQQTEKTTTVKFNRRKVMDSDED 122
BLAST of CX288616 vs. ExPASy Swiss-Prot
Match: PDCD5_MOUSE (Programmed cell death protein 5 OS=Mus musculus GN=Pdcd5 PE=1 SV=3) HSP 1 Score: 88.1965 bits (217), Expect = 3.082e-17 Identity = 50/129 (38.76%), Postives = 76/129 (58.91%), Query Frame = 3 Query: 135 MADPELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLLEXXXXXXXXXXXXXXXRRRSVLEDDD 521 MAD ELEA+R++R+ EL A+ G + AQ++AK+ E R +L+Q+L AR RL+ +ALVKPEK + VE+ +++ A+ GQ+ KVSE+ LI +LE RR+ + D+D Sbjct: 1 MADEELEALRKQRLAELQAKHG-------DPGDAAQQEAKQREAEMRNSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSGKVSEQGLIEILEKVSQQTEKKTTVKFNRRKVMDSDED 122
BLAST of CX288616 vs. ExPASy Swiss-Prot
Match: YF69_SCHPO (Uncharacterized protein C23C4.09c OS=Schizosaccharomyces pombe GN=SPAC23C4.09c PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 8.968e-17 Identity = 51/127 (40.16%), Postives = 71/127 (55.91%), Query Frame = 3 Query: 141 DPELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLLEXXXXXXXXXXXXXXXRRRSVLEDDD 521 D EL+AIRQ R+ +L A+ G + N + + + DE RQ +LSQIL AR+RL RIALV+ ++A VE+++LR A+ GQI K+SE LI LLE R V +D+D Sbjct: 2 DEELQAIRQARLAQLQAEHG-SAPSNIASGPSSNQQQQEVQDEMRQNLLSQILEHPARDRLRRIALVRKDRAEAVEELLLRMAKTGQISHKISEPELIELLEKISGEVSKRNETKIVINRRVQDDED 127
BLAST of CX288616 vs. ExPASy Swiss-Prot
Match: PDCD5_BOVIN (Programmed cell death protein 5 OS=Bos taurus GN=PDCD5 PE=2 SV=3) HSP 1 Score: 86.2705 bits (212), Expect = 1.171e-16 Identity = 49/129 (37.98%), Postives = 75/129 (58.14%), Query Frame = 3 Query: 135 MADPELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLLEXXXXXXXXXXXXXXXRRRSVLEDDD 521 MA+ ELEA+R++R+ EL A+ G + AQ++AK E R +L+Q+L AR RL+ +ALVKPEK + VE+ +++ A+ GQ+ KVSE+ LI +LE RR+ + D+D Sbjct: 1 MAEQELEALRKQRLAELQAKHG-------DPGDAAQQEAKHREAEMRNSILAQVLDQSARARLSNLALVKPEKTKAVENYLIQMARYGQLSGKVSEQGLIEILEKVSQQTEKKTTVKFNRRKVMDSDED 122
BLAST of CX288616 vs. ExPASy Swiss-Prot
Match: Y708_METS3 (DNA-binding protein Msm_0708 OS=Methanobrevibacter smithii (strain PS / ATCC 35061 / DSM 861) GN=Msm_0708 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.096e-14 Identity = 42/101 (41.58%), Postives = 68/101 (67.33%), Query Frame = 3 Query: 147 ELEAIRQRRMQELMAQQGV--GSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLL 443 +L+ IR++RM EL A+Q G Q Q Q Q++A+R+ +E+++ +++QIL+TEAR RLA + L KPE +E +++SAQ G + KV++E+L LL Sbjct: 3 DLDEIRRKRMAELEARQAAAQGQMQQQAQQQMQQQEAQRQFEEQKKALIAQILTTEARSRLANLKLTKPELVNQIEIQLIQSAQAGSLRGKVTDEQLKVLL 103
BLAST of CX288616 vs. ExPASy Swiss-Prot
Match: Y1619_METKA (DNA-binding protein MK1619 OS=Methanopyrus kandleri GN=MK1619 PE=3 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 1.870e-14 Identity = 44/106 (41.51%), Postives = 70/106 (66.04%), Query Frame = 3 Query: 135 MADPELEAIRQRRMQELMA--QQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLLE 446 M DPELE IR++++ EL ++ + E+ +KA E+A+R A ML +IL+ EARERLAR+ L +P+ A+ VE+ +L+ AQ GQ+ EK+ E++L +L+ Sbjct: 1 MTDPELERIRRKKIMELQRKLEESQEKKVEEEREKKALEEAQRRA------MLRRILTPEARERLARVRLARPQLAQAVENYLLQLAQTGQLKEKIDEDQLKRILK 100
BLAST of CX288616 vs. ExPASy Swiss-Prot
Match: Y536_METPE (DNA-binding protein Mpal_0536 OS=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) GN=Mpal_0536 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.340e-12 Identity = 44/103 (42.72%), Postives = 59/103 (57.28%), Query Frame = 3 Query: 135 MADPELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREADERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLL 443 M D EL +R+RRM +L +QQ Q+ ++ K+ A QM L QIL EARERL I L KPE A GVE ++ AQ G+I +K+S+ +L LL Sbjct: 1 MGDDELAELRRRRMAQLQSQQ---------MDQQQMDEEKQRAKSAMQMALMQILEPEARERLNTIRLTKPEFAAGVEQQLVMLAQSGRIKQKISDAQLKDLL 94
BLAST of CX288616 vs. ExPASy Swiss-Prot
Match: Y1087_PYRFU (DNA-binding protein PF1087 OS=Pyrococcus furiosus GN=PF1087 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 1.340e-12 Identity = 43/102 (42.16%), Postives = 67/102 (65.69%), Query Frame = 3 Query: 147 ELEAIRQRRMQELMAQQGVGSQQNSEQHQKAQEDAKREA---DERRQMMLSQILSTEARERLARIALVKPEKARGVEDIILRSAQMGQIVEKVSEERLISLL 443 ++E IR+R++ EL Q+ + QKAQE+A+R+ + + Q +L +IL+ EARERLAR+ LVKPE AR VE I+++ Q GQI EK+ + ++ +L Sbjct: 4 DIEEIRRRKLMEL--------QKKYLEQQKAQEEAERQQALIEAQIQAILRRILTPEARERLARVKLVKPELARQVELILVQLYQAGQITEKIDDAKMKKIL 97 The following BLAST results are available for this feature:
BLAST of CX288616 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >CX288616 ID=CX288616; Name=CX288616; organism=Citrus clementina; type=EST; length=570bpback to top |