CX288636
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX288636 vs. ExPASy Swiss-Prot
Match: STLP2_ARATH (SEC12-like protein 2 OS=Arabidopsis thaliana GN=STL2P PE=1 SV=4) HSP 1 Score: 174.866 bits (442), Expect = 2.069e-43 Identity = 89/168 (52.98%), Postives = 119/168 (70.83%), Query Frame = 1 Query: 22 VVLXXXXXXXNSGIRNAVLLSHFDFASNSLSDQPVAELRTDSDLPYRMAIHPHGDGIICALQNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLRNRGP-GRVWDL 522 +VL SGI N +L+ D +NSLS+QP+ L SDLPYRMA+HP G+ICAL NSC+LF W+++ + E + G SE+V+ +L +VGQQLAL F+ EG++ AAG+E+G LRVFKWPS+ +LNES+AH+SVK L+FS G+FLVSL GP RVWD+ Sbjct: 60 IVLSGGGGEGRSGISNVILICRVDLNTNSLSEQPLGRLVVGSDLPYRMAVHPREGGLICALPNSCKLFHWEDIMSREDNQAGE--SEEVIKELRDVGQQLALAFNPEGSVLAAGAEDGTLRVFKWPSMNTLLNESQAHSSVKCLTFSESGQFLVSL--GGPVCRVWDV 223
BLAST of CX288636 vs. ExPASy Swiss-Prot
Match: PHF1_ARATH (SEC12-like protein 1 OS=Arabidopsis thaliana GN=PHF1 PE=2 SV=2) HSP 1 Score: 94.7449 bits (234), Expect = 2.721e-19 Identity = 55/171 (32.16%), Postives = 89/171 (52.05%), Query Frame = 1 Query: 19 YVVLXXXXXXXNSGIRNAVLLSHFDF--ASNSLSDQPVAE--LRTDSDLPYRMAIHPHGDGIICAL-QNSCRLFEWDEVENTEIRRLGVKISEKVLSQLENVGQQLALTFDSEGTIFAAGSENGNLRVFKWPSLEIILNESEAHASVKDLSFSPDGKFLVSLRNRGPGRVW 516 +V++ S + + LL+ F F + SLS P+A L+ P +++HP GD +C+ + C+LFE G+ I K L L+N G Q + F +G+ A G +G LR+ +WP+L +IL+E +AH S++D+ FS D +FL + G R+W Sbjct: 27 WVLIAKASKRRGSSVSSPALLNIFSFDPITASLSSSPLATHTLKDSDGDPVAVSVHPGGDYFVCSTSKGGCKLFELVGGAT------GITILAKELLPLQNAGLQKCMAFSFDGSKLAVGGVDGCLRIMEWPNLSVILDEPKAHKSIRDMDFSLDSEFLATTSTDGSARIW 191 The following BLAST results are available for this feature:
BLAST of CX288636 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 2
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288636 ID=CX288636; Name=CX288636; organism=Citrus clementina; type=EST; length=523bpback to top |