CX288787
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288787 vs. ExPASy Swiss-Prot
Match: ARP9_ARATH (Actin-related protein 9 OS=Arabidopsis thaliana GN=ARP9 PE=2 SV=1) HSP 1 Score: 257.684 bits (657), Expect = 2.937e-68 Identity = 125/189 (66.14%), Postives = 148/189 (78.31%), Query Frame = 3 Query: 3 IRTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGSHKTRLTALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYXDMLEDTWHTDFPRRSDISXNFYPGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAI 569 I TD+L K +D+LMLN++KES+CEI+ GE++ VA VHSYE+GMP HKT LT+LNVPPMGLFYP LLVP+++P PPR WF DY +MLEDTW+ DF G N+GLPMW+S+ +KPKKEEKIGLAEA+TSSILS GRIDL+RKLF SIQLIGG LT GL+ AVEERVLHAIP EAI Sbjct: 350 INTDVLAKPIDMLMLNQLKESFCEIRAGELETVATVHSYEEGMPAVPHKTNLTSLNVPPMGLFYPNLLVPEIFPQPPRQWFQDYENMLEDTWNMDFG----------GGGNMGLPMWDSFAFSPSKPKKEEKIGLAEAITSSILSAGRIDLRRKLFSSIQLIGGAGLTKGLVAAVEERVLHAIPPTEAI 528
BLAST of CX288787 vs. ExPASy Swiss-Prot
Match: ARP9_ORYSJ (Actin-related protein 9 OS=Oryza sativa subsp. japonica GN=ARP9 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 1.726e-60 Identity = 112/188 (59.57%), Postives = 139/188 (73.94%), Query Frame = 3 Query: 6 RTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGSHKTRLTALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYXDMLEDTWHTDFPRRSDISXNFYPGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAI 569 +TD + K +D+LMLN++KESY +I+ G DAV+VVHSYE G KT+L+ALNVPPMGL YP++LVP+ YPPPPRSWF DY DMLEDTW T S + Y N G MW++YP+ T+ KK + IGL EA+ SSILSTGRI+LQRKLFCSIQL+GG A T GL P +E+RVL+ IPSN+ I Sbjct: 339 QTDPVNKPIDMLMLNKLKESYSQIRSGSFDAVSVVHSYEHEKSVGHQKTKLSALNVPPMGLLYPRVLVPEEYPPPPRSWFQDYDDMLEDTWQT--------SDSLYSSGNGGFGMWDNYPMFPTRLKKFDNIGLVEAIVSSILSTGRIELQRKLFCSIQLVGGTASTAGLAPVLEQRVLNTIPSNQPI 518
BLAST of CX288787 vs. ExPASy Swiss-Prot
Match: ARP9_ORYSI (Actin-related protein 9 OS=Oryza sativa subsp. indica GN=ARP9 PE=2 SV=2) HSP 1 Score: 230.72 bits (587), Expect = 3.845e-60 Identity = 111/188 (59.04%), Postives = 139/188 (73.94%), Query Frame = 3 Query: 6 RTDILTKAMDLLMLNRIKESYCEIKEGEIDAVAVVHSYEDGMPPGSHKTRLTALNVPPMGLFYPKLLVPDVYPPPPRSWFNDYXDMLEDTWHTDFPRRSDISXNFYPGINVGLPMWESYPVLTTKPKKEEKIGLAEAVTSSILSTGRIDLQRKLFCSIQLIGGVALTGGLIPAVEERVLHAIPSNEAI 569 +TD + + +D+LMLN++KESY +I+ G DAV+VVHSYE G KT+L+ALNVPPMGL YP++LVP+ YPPPPRSWF DY DMLEDTW T S + Y N G MW++YP+ T+ KK + IGL EA+ SSILSTGRI+LQRKLFCSIQL+GG A T GL P +E+RVL+ IPSN+ I Sbjct: 339 QTDPVNRPIDMLMLNKLKESYSQIRSGSFDAVSVVHSYEHEKSVGHQKTKLSALNVPPMGLLYPRVLVPEEYPPPPRSWFQDYDDMLEDTWQT--------SDSLYSSGNGGFGMWDNYPMFPTRLKKFDNIGLVEAIVSSILSTGRIELQRKLFCSIQLVGGTASTAGLAPVLEQRVLNTIPSNQPI 518 The following BLAST results are available for this feature:
BLAST of CX288787 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288787 ID=CX288787; Name=CX288787; organism=Citrus clementina; type=EST; length=571bpback to top |