CX288934
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288934 vs. ExPASy Swiss-Prot
Match: BPL1_MOUSE (Biotin--protein ligase OS=Mus musculus GN=Hlcs PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.213e-22 Identity = 64/203 (31.53%), Postives = 105/203 (51.72%), Query Frame = 2 Query: 17 SPKGC----LMFSFTIQMEDGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGI-KVGGILCTSTYRTKKFNVSIGIGLNVNNEEPTTCLNAVL----RKLSDSTYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHSGQRVIVQEKNEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHP 598 SP GC L+ ++ + G+ +P +Q++ SLA+ EA+ + G +++++KWPND+Y + + K+GG+L ST + F + IG G NV N PT C+N ++ ++ R + +IA E D F +QG + LYYK W+H GQ+V + Q +I GL SG+L +D + +HP Sbjct: 511 SPVGCALSTLLVFIPLRSQLGQRIPFVQHLMSLAVVEAVRSI---PGYEDINLRVKWPNDIYYSDLMKIGGVLVNSTLMGETFYILIGCGFNVTNSNPTICINDLIEEHNKQHGAGLKPLRADCLIARAVTVLEKLIDRFQDQGPDGVLPLYYKYWVHGGQQVRLGSTEGPQ-----ASIVGLDDSGFLQVHQEDGGVVTVHP 705
BLAST of CX288934 vs. ExPASy Swiss-Prot
Match: BPL1_HUMAN (Biotin--protein ligase OS=Homo sapiens GN=HLCS PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 1.752e-21 Identity = 60/203 (29.56%), Postives = 107/203 (52.71%), Query Frame = 2 Query: 17 SPKGC----LMFSFTIQMEDGRVVPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNGI-KVGGILCTSTYRTKKFNVSIGIGLNVNNEEPTTCLNAVLRKLSD----STYQFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHSGQRVIVQEKNEDQVVENVVTIQGLTSSGYLLAIGDDNQMCELHP 598 SP GC L+ S ++ + G+ +P +Q++ S+A+ EA+ + + ++++KWPND+Y + + K+GG+L ST + F + IG G NV N PT C+N ++ + + R + +IA E F ++G ++ LYY+ W+HSGQ+V + + V+I GL SG+L + ++ +HP Sbjct: 515 SPVGCALSTLLISIPLRSQLGQRIPFVQHLMSVAVVEAVRSIPEYQDI---NLRVKWPNDIYYSDLMKIGGVLVNSTLMGETFYILIGCGFNVTNSNPTICINDLITEYNKQHKAELKPLRADYLIARVVTVLEKLIKEFQDKGPNSVLPLYYRYWVHSGQQVHLGSAEGPK-----VSIVGLDDSGFLQVHQEGGEVVTVHP 709
BLAST of CX288934 vs. ExPASy Swiss-Prot
Match: BPL1_SCHPO (Biotin--protein ligase OS=Schizosaccharomyces pombe GN=bpl1 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.138e-19 Identity = 68/205 (33.17%), Postives = 104/205 (50.73%), Query Frame = 2 Query: 17 SPKGCLMFSFTIQMEDGRV----VPLLQYVASLALTEAIN-YVCSRDGLPCLDIKIKWPNDLYLN----GI--------KVGGILCTSTYRTKKFNVSIGIGLNVNNEEPTTCLNAVL---RKLSDSTY--QFRREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHSGQRVIVQEKNEDQVVENVVTIQGLTSS-GYLLA 562 SP G L FSF I ++ + L QY+ +LA+ I Y + +P IKWPND+Y+ GI K+ GI+ TS YR ++ +G G+NV+N PT LN ++ K SD+ +F E ++A+ N+F+ ++ + +GF + YY+ WLHS Q V + + IQG+TS G+LLA Sbjct: 403 SPYGTLAFSFIINVDAKNFSTTPIALFQYLMALAVVRGIREYAPGYENIPAF---IKWPNDVYVRVDKGGINFQGKQYMKLSGIIVTSNYRKNVLHLVVGCGINVSNLGPTVSLNTLVDEWNKNSDNPRLEKFSFEKLLASVLNQFDRYHRLLLEEGFSLILPEYYQYWLHSNQTVNLASGGK-------AIIQGITSDFGFLLA 597
BLAST of CX288934 vs. ExPASy Swiss-Prot
Match: BPL1_YEAST (Biotin--protein ligase OS=Saccharomyces cerevisiae GN=BPL1 PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 4.782e-11 Identity = 52/202 (25.74%), Postives = 85/202 (42.08%), Query Frame = 2 Query: 74 VPLLQYVASLALTEAINYVCSRDGLPCLDIKIKWPNDLYLNG------------------------------IKVGGILCTSTYRTKKFNVSIGIGLNVNNEEPTTCLNAVLRKLSDSTYQF--------RREDVIAAFFNKFETFYDTFINQGFQTLEELYYKTWLHSGQRVIVQEKNEDQVVENVVTIQGLTSS-GYLLA 562 V +QY++ LA +AI + G + ++IKWPNDLY +K+ G+L + + K+ + +G G+N+ ++ PTT L + L++ Q + E + A + N E FIN G + YY+ WLHS Q V + + Q + I G+T G L+A Sbjct: 458 VVFVQYLSMLAYCKAI--LSYAPGFSDIPVRIKWPNDLYALSPTYYKRKNLKLVNTGFEHTKLPLGDIEPAYLKISGLLVNTHFINNKYCLLLGCGINLTSDGPTTSLQTWIDILNEERQQLHLDLLPAIKAEKLQALYMNNLEVILKQFINYGAAEILPSYYELWLHSNQIVTLPDHGNTQAM-----ITGITEDYGLLIA 652 The following BLAST results are available for this feature:
BLAST of CX288934 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288934 ID=CX288934; Name=CX288934; organism=Citrus clementina; type=EST; length=599bpback to top |