CX288967
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX288967 vs. ExPASy Swiss-Prot
Match: SHN2_ARATH (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana GN=SHN2 PE=2 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 4.649e-45 Identity = 88/134 (65.67%), Postives = 100/134 (74.63%), Query Frame = 3 Query: 255 MVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXXVLMNGQNAKTNFPILKPNNPEAEGTKGSSYNIPEKGFSELLNSKLRKCCKDLSPSLTCLRLDNDNSHIGVWQKRAGSRSGSSWV 656 MV S+KFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFET +LMNGQNAKTNFP++K +S + K SELLN+KLRK CKDL+PSLTCLRLD D+SHIGVWQKRAGS++ +WV Sbjct: 1 MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKTNFPVVKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRKSCKDLTPSLTCLRLDTDSSHIGVWQKRAGSKTSPTWV 134
BLAST of CX288967 vs. ExPASy Swiss-Prot
Match: SHN3_ARATH (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana GN=SHN3 PE=2 SV=1) HSP 1 Score: 177.178 bits (448), Expect = 6.714e-44 Identity = 88/134 (65.67%), Postives = 101/134 (75.37%), Query Frame = 3 Query: 255 MVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXXVLMNGQNAKTNFPILKPNNPEAEGTKGSSYNIPEKGFSELLNSKLRKCCKDLSPSLTCLRLDNDNSHIGVWQKRAGSRSGSSWV 656 MV SKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTF+T VLMNGQ+AKTNFP++K N + + +S K SELLN+KLRK CKD +P LTCLRLDND+SHIGVWQKRAGS++ +WV Sbjct: 1 MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKTNFPVIKSNG--SNSLEINSALRSPKSLSELLNAKLRKNCKDQTPYLTCLRLDNDSSHIGVWQKRAGSKTSPNWV 132
BLAST of CX288967 vs. ExPASy Swiss-Prot
Match: WIN1_ARATH (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana GN=WIN1 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.828e-41 Identity = 86/141 (60.99%), Postives = 100/141 (70.92%), Query Frame = 3 Query: 255 MVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXXVLMNGQNAKTNFPILKPNNPE-AEG------TKGSSYNIPEKGFSELLNSKLRKCCKDLSPSLTCLRLDNDNSHIGVWQKRAGSRSGSSWV 656 MVQ+KKFRGVRQR WGSWV+EIRHPLLKRR+WLGTFET VLM+G+NAKTNFP+ N E +EG + S + S +L++KLRKCCK SPSLTCLRLD +SHIGVWQKRAGS+S SSWV Sbjct: 1 MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKCCKSPSPSLTCLRLDTASSHIGVWQKRAGSKSDSSWV 141
BLAST of CX288967 vs. ExPASy Swiss-Prot
Match: ERF03_ARATH (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana GN=ERF003 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 6.996e-17 Identity = 49/94 (52.13%), Postives = 54/94 (57.45%), Query Frame = 3 Query: 267 KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXXVLMNGQNAKTNFPILKPNNPEAEGTKGSSYNIPEKGFSELLNSKLRKC 548 ++FRGVRQR WGSWVSEIRHPLLK R+WLGTFET LM G A+TNFP NP A T S K S L +KL KC Sbjct: 6 QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY----NPNAIPTSSS------KLLSATLTAKLHKC 89
BLAST of CX288967 vs. ExPASy Swiss-Prot
Match: PZ02_LUPPO (Protein PPLZ02 OS=Lupinus polyphyllus GN=PPLZ02 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 8.005e-13 Identity = 41/94 (43.62%), Postives = 51/94 (54.26%), Query Frame = 3 Query: 267 KKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXXVLMNGQNAKTNFPILKPNNPEAEGTKGSSYNIPEKGFSELLNSKLRKC 548 +++RG RQR WGSWVSEIRH +LK R+W GTFE+ LM G A+TNFP NP A + S K S L +KL +C Sbjct: 6 QRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRARTNFPY----NPNASQSSSS------KLLSATLIAKLHRC 89
BLAST of CX288967 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.850e-12 Identity = 40/120 (33.33%), Postives = 60/120 (50.00%), Query Frame = 3 Query: 237 LSNSTNMVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXXVLMNGQNAKTNFPILKPNNPEAEGTKGSSYNIPEKGFSELLNSKLRKCCKDLSPSLTCLRLDND 596 +S +++ + KKFRGVRQR WG W +EIR P +RVWLGT++T V + G +A TNFP+ T+ + ++ + G K D++ S T + DND Sbjct: 86 VSPDSDVTRRKKFRGVRQRPWGRWAAEIRDPTRGKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTAEVTVTVTETETESVADGG---------DKSENDVALSPTSVLCDND 196
BLAST of CX288967 vs. ExPASy Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 8.850e-12 Identity = 34/71 (47.89%), Postives = 40/71 (56.34%), Query Frame = 3 Query: 261 QSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXXVLMNGQNAKTNFPILKPNNPEAE 473 Q KKFRGVRQR WG W +EIR P +RR+WLGTFET + + G +A TNF I E E Sbjct: 121 QIKKFRGVRQRPWGKWAAEIRDPEQRRRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSIPPQEEEEEE 191
BLAST of CX288967 vs. ExPASy Swiss-Prot
Match: RAP26_ARATH (Ethylene-responsive transcription factor RAP2-6 OS=Arabidopsis thaliana GN=RAP2-6 PE=2 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 5.737e-11 Identity = 34/76 (44.74%), Postives = 43/76 (56.58%), Query Frame = 3 Query: 216 SAITIAQLSNSTNMVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXXVLMNGQNAKTNFP 443 SA+T + +S ++ + KK+RGVRQR WG W +EIR P RVWLGTFET + G AK NFP Sbjct: 43 SAVT-KECESSMSLERPKKYRGVRQRPWGKWAAEIRDPHKATRVWLGTFETAEAAARAYDAAALRFRGSKAKLNFP 117
BLAST of CX288967 vs. ExPASy Swiss-Prot
Match: RAP24_ARATH (Ethylene-responsive transcription factor RAP2-4 OS=Arabidopsis thaliana GN=RAP2-4 PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 7.492e-11 Identity = 36/100 (36.00%), Postives = 50/100 (50.00%), Query Frame = 3 Query: 264 SKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXXVLMNGQNAKTNFPILKPNNPEAEGTKGSSYNIPEKGFSELLNSKLRKCCKDLS 563 +K +RGVRQR WG WV+EIR P + R+WLGTF+T + G A+ NFP L+ N G G K +++KL CK ++ Sbjct: 149 TKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDKAAYKLRGDFARLNFPNLRHNGSHIGGDFGE-----YKPLHSSVDAKLEAICKSMA 243
BLAST of CX288967 vs. ExPASy Swiss-Prot
Match: ERF60_ARATH (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1) HSP 1 Score: 67.0106 bits (162), Expect = 9.785e-11 Identity = 37/103 (35.92%), Postives = 54/103 (52.43%), Query Frame = 3 Query: 252 NMVQSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETXXXXXXXXXXXXVLMNGQNAKTNFPILKPNNPEAEGTKGSSYNIPEKGFSELLNSKLRKCCKDL 560 NM K +RGVRQR WG WV+EIR P + R+WLGTF+T + G+ A+ NFP + + G GS +N +++KL++ C+ L Sbjct: 86 NMTAQKLYRGVRQRHWGKWVAEIRLPKNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFPQFRHEDGYYGG--GSCFN----PLHSSVDAKLQEICQSL 182 The following BLAST results are available for this feature:
BLAST of CX288967 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX288967 ID=CX288967; Name=CX288967; organism=Citrus clementina; type=EST; length=657bpback to top |