CX289017
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289017 vs. ExPASy Swiss-Prot
Match: PPR26_ARATH (Putative pentatricopeptide repeat-containing protein At1g09680 OS=Arabidopsis thaliana GN=At1g09680 PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 8.432e-23 Identity = 49/77 (63.64%), Postives = 58/77 (75.32%), Query Frame = 2 Query: 11 EIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESALHIRKRND 241 E YQ ML K L+PD+++YNTL NG CK GD+ AR IVD M GL PDKITYTTL+DGFC+ GD+E+AL IRK D Sbjct: 366 ESYQKMLSKGLQPDIVLYNTLVNGFCKNGDLVAARNIVDGMIRRGLRPDKITYTTLIDGFCRGGDVETALEIRKEMD 442
BLAST of CX289017 vs. ExPASy Swiss-Prot
Match: PP442_ARATH (Pentatricopeptide repeat-containing protein At5g61990, mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 4.194e-14 Identity = 30/74 (40.54%), Postives = 52/74 (70.27%), Query Frame = 2 Query: 5 AMEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESALHI 226 A I+ M+ + L P++I+YN L G C+ G++++A++++DEM GL+P+ +TY T++DG+CK GDL A + Sbjct: 646 ASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719 HSP 2 Score: 68.5514 bits (166), Expect = 1.142e-11 Identity = 32/71 (45.07%), Postives = 44/71 (61.97%), Query Frame = 2 Query: 5 AMEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESA 217 A EI++ M K + PD+ Y L NG K+G+M++A I DEM GL P+ I Y LL GFC+ G++E A Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKA 681 HSP 3 Score: 67.3958 bits (163), Expect = 2.545e-11 Identity = 33/74 (44.59%), Postives = 45/74 (60.81%), Query Frame = 2 Query: 5 AMEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESALHI 226 A E+ M K L P+ + Y T+ +G CK GD+ EA ++ DEM GL PD YTTL+DG C+ D+E A+ I Sbjct: 681 AKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITI 754
BLAST of CX289017 vs. ExPASy Swiss-Prot
Match: PPR12_ARATH (Pentatricopeptide repeat-containing protein At1g05665, mitochondrial OS=Arabidopsis thaliana GN=At1g05665 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 1.220e-13 Identity = 34/76 (44.74%), Postives = 51/76 (67.11%), Query Frame = 2 Query: 5 AMEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESALHIRK 232 A E+ M + L+P++ YN++ NGLCK G+++EA K+V E GLN D +TYTTL+D +CK G+++ A I K Sbjct: 475 ANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILK 550 HSP 2 Score: 73.9442 bits (180), Expect = 2.719e-13 Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 2 Query: 5 AMEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESA 217 A +++ M K L+PD + + L NG CK G MK+A ++ + M G +P+ +TYTTL+DG CKEGDL+SA Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475 HSP 3 Score: 70.8626 bits (172), Expect = 2.302e-12 Identity = 28/74 (37.84%), Postives = 47/74 (63.51%), Query Frame = 2 Query: 5 AMEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESALHI 226 A + + M +D+ PD++ Y + +G C++GDM EA K+ EM GL PD +T+T L++G+CK G ++ A + Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443 HSP 4 Score: 67.3958 bits (163), Expect = 2.545e-11 Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 2 Query: 5 AMEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESA 217 A E + M+R+ + PD ++Y TL +G CK GD++ A K EM + + PD +TYT ++ GFC+ GD+ A Sbjct: 335 AEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEA 405 HSP 5 Score: 67.0106 bits (162), Expect = 3.323e-11 Identity = 28/69 (40.58%), Postives = 45/69 (65.22%), Query Frame = 2 Query: 11 EIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESA 217 ++ ++M RK LKP+ +Y ++ LC++ + EA + EM G+ PD + YTTL+DGFCK GD+ +A Sbjct: 302 KLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAA 370
BLAST of CX289017 vs. ExPASy Swiss-Prot
Match: RF1_ORYSI (Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 2.719e-13 Identity = 33/74 (44.59%), Postives = 52/74 (70.27%), Query Frame = 2 Query: 11 EIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESALHIRK 232 ++++LM+R +KP++I YNTL NG C G M EA K++ M + GL P+ +TY+TL++G+CK +E AL + K Sbjct: 497 KLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFK 570
BLAST of CX289017 vs. ExPASy Swiss-Prot
Match: PP281_ARATH (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 6.057e-13 Identity = 30/76 (39.47%), Postives = 52/76 (68.42%), Query Frame = 2 Query: 5 AMEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESALHIRK 232 A+EI +ML++ PD+ YN++ +GLCK+G++KEA +++D+M T +P+ +TY TL+ CKE +E A + + Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389
BLAST of CX289017 vs. ExPASy Swiss-Prot
Match: PPR93_ARATH (Pentatricopeptide repeat-containing protein At1g62720 OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.762e-12 Identity = 31/64 (48.44%), Postives = 46/64 (71.88%), Query Frame = 2 Query: 5 AMEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCK 196 AM++Y+ M R+ + PD+ YN+L NGLC G + EA++++D M T G PD +TY TL++GFCK Sbjct: 263 AMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCK 326
BLAST of CX289017 vs. ExPASy Swiss-Prot
Match: PPR27_ARATH (Pentatricopeptide repeat-containing protein At1g09820 OS=Arabidopsis thaliana GN=At1g09820 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.762e-12 Identity = 32/72 (44.44%), Postives = 51/72 (70.83%), Query Frame = 2 Query: 5 AMEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESAL 220 +M++++ ML +D+KP++I YN+L NGLC G + EA + D+M + G+ P+ ITY L++GFCK L+ AL Sbjct: 315 SMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEAL 386 HSP 2 Score: 65.4698 bits (158), Expect = 9.670e-11 Identity = 24/63 (38.10%), Postives = 45/63 (71.43%), Query Frame = 2 Query: 14 IYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEG 202 +Y+ M+R+ ++P++ +N + N LCK G M +AR ++++M G +P+ ++Y TL+DG+CK G Sbjct: 210 VYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLG 272
BLAST of CX289017 vs. ExPASy Swiss-Prot
Match: PP306_ARATH (Pentatricopeptide repeat-containing protein At4g11690 OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 1.762e-12 Identity = 31/74 (41.89%), Postives = 49/74 (66.22%), Query Frame = 2 Query: 5 AMEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESALHI 226 A +++ M + + +++ YNTL GLC+ + EA K+VD+M ++G+NP+ ITY TL+DGFC G L AL + Sbjct: 287 AFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSL 360
BLAST of CX289017 vs. ExPASy Swiss-Prot
Match: PP407_ARATH (Pentatricopeptide repeat-containing protein At5g39710 OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 5.127e-12 Identity = 32/74 (43.24%), Postives = 47/74 (63.51%), Query Frame = 2 Query: 5 AMEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESALHI 226 A+ + + M+ K +KPD I Y++L G C+ KEA + +EM GL PD+ TYT L++ +C EGDLE AL + Sbjct: 469 ALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQL 542 HSP 2 Score: 68.9366 bits (167), Expect = 8.746e-12 Identity = 31/70 (44.29%), Postives = 46/70 (65.71%), Query Frame = 2 Query: 11 EIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESAL 220 ++ + M K L+P+LI YN + NGLC+ G MKE ++ EM G + D++TY TL+ G+CKEG+ AL Sbjct: 261 KLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQAL 330 HSP 3 Score: 65.855 bits (159), Expect = 7.404e-11 Identity = 32/80 (40.00%), Postives = 51/80 (63.75%), Query Frame = 2 Query: 5 AMEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESALHI-RKRND 241 A+ ++ MLR L P +I Y +L + +CK G+M A + +D+M GL P++ TYTTL+DGF ++G + A + R+ ND Sbjct: 329 ALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMND 408 HSP 4 Score: 63.929 bits (154), Expect = 7.438e-11 Identity = 26/76 (34.21%), Postives = 47/76 (61.84%), Query Frame = 2 Query: 5 AMEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESALHIRK 232 A + + M P ++ YN L NG C G M++A ++++M GL+PD ++Y+T+L GFC+ D++ AL +++ Sbjct: 399 AYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKR 474 HSP 5 Score: 21.9422 bits (45), Expect = 7.438e-11 Identity = 6/20 (30.00%), Postives = 17/20 (85.00%), Query Frame = 3 Query: 225 LEKEMIKRGIELDNVPFTAL 284 +++EM+++GI+ D + +++L Sbjct: 472 VKREMVEKGIKPDTITYSSL 491
BLAST of CX289017 vs. ExPASy Swiss-Prot
Match: PP120_ARATH (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.696e-12 Identity = 30/70 (42.86%), Postives = 44/70 (62.86%), Query Frame = 2 Query: 8 MEIYQLMLRKDLKPDLIMYNTLTNGLCKVGDMKEARKIVDEMCTNGLNPDKITYTTLLDGFCKEGDLESA 217 ME Y+ M+ K P+L +N L LC+ + EA +++EM +NPD +T+ TL+DGFCK GDL+ A Sbjct: 516 METYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGA 585 The following BLAST results are available for this feature:
BLAST of CX289017 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289017 ID=CX289017; Name=CX289017; organism=Citrus clementina; type=EST; length=285bpback to top |