CX289131
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289131 vs. ExPASy Swiss-Prot
Match: GLR34_ARATH (Glutamate receptor 3.4 OS=Arabidopsis thaliana GN=GLR3.4 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 3.532e-34 Identity = 80/157 (50.96%), Postives = 104/157 (66.24%), Query Frame = 3 Query: 3 GFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTY-NECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRVCGQFRRFGXXXXXXXXXXXXAHDXXXXXXXXXXXXXFKDLIDFIDRKEAEIKEILKRRNSDNKRPSQSSDG*TNS 470 GFAFQRDSPLA+D+STAILQLSE G+L+KIH KWL Y +ECSM +S ++ S+LSLKSFWGLFLICGI CF+AL FF RV Q++R + FK+LI +D++EAEIKEILK+++S + +QS+ G + S Sbjct: 801 GFAFQRDSPLAVDMSTAILQLSEEGELEKIHRKWLNYKHECSMQISNSE--DSQLSLKSFWGLFLICGITCFMALTVFFWRVFWQYQRLLPESADEERAGEVSE--PSRSGRGSRAPSFKELIKVVDKREAEIKEILKQKSSKKLKSTQSAAGTSQS 953
BLAST of CX289131 vs. ExPASy Swiss-Prot
Match: GLR35_ARATH (Glutamate receptor 3.5 OS=Arabidopsis thaliana GN=GLR3.5 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 4.469e-29 Identity = 70/151 (46.36%), Postives = 95/151 (62.91%), Query Frame = 3 Query: 3 GFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTY-NECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRVCGQFRRFGXXXXXXXXXXXXAHDXXXXXXXXXXXXXFKDLIDFIDRKEAEIKEILKRRNSDNKRPSQSS 452 GFAFQRDSPLA+D+STAILQL+E G L+KI KWLTY +EC+M +S D ++S++SFWGLFLICG+ F+AL F +V Q++R + + FKDLI +D++EAEIKE+LK ++S + QSS Sbjct: 794 GFAFQRDSPLAVDMSTAILQLAEEGKLEKIRKKWLTYDHECTMQIS--DTENYQISVQSFWGLFLICGVVWFIALTLFCWKVFWQYQRL--RPEESDEVQARSEEAGSSRGKSLRAVSFKDLIKVVDKREAEIKEMLKEKSSKKLKDGQSS 940
BLAST of CX289131 vs. ExPASy Swiss-Prot
Match: GLR32_ARATH (Glutamate receptor 3.2 OS=Arabidopsis thaliana GN=GLR3.2 PE=1 SV=2) HSP 1 Score: 114.39 bits (285), Expect = 3.915e-25 Identity = 61/144 (42.36%), Postives = 84/144 (58.33%), Query Frame = 3 Query: 3 GFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECS-MDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRVCGQFRRFGXXXXXXXXXXXXAHDXXXXXXXXXXXXXFKDLIDFIDRKEAEIKEILKRRNSDN 431 GFAF RDSPLAID+STAIL LSE G LQKIH+KWL+ + CS ++ S +D +L L+SFWGLFL+CGI+CF+AL +F ++ F R G + + + + D KE E K +KR+ +D+ Sbjct: 770 GFAFPRDSPLAIDMSTAILGLSETGQLQKIHDKWLSRSNCSNLNGSVSDEDSEQLKLRSFWGLFLVCGISCFIALFIYFFKIVRDFFRHGKYD----------EEATVPSPESSRSKSLQTFLAYFDEKEDESKRRMKRKRNDD 903
BLAST of CX289131 vs. ExPASy Swiss-Prot
Match: GLR33_ARATH (Glutamate receptor 3.3 OS=Arabidopsis thaliana GN=GLR3.3 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 1.488e-24 Identity = 55/84 (65.48%), Postives = 65/84 (77.38%), Query Frame = 3 Query: 3 GFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRVCGQ 254 GFAF RDSPLAIDLSTAIL+L+ENGDLQ+IH+KWL N C+ L A+ RL LKSFWGLFLICG+AC LAL +F ++ Q Sbjct: 773 GFAFPRDSPLAIDLSTAILELAENGDLQRIHDKWLMKNACT--LENAELESDRLHLKSFWGLFLICGVACLLALFLYFVQIIRQ 854
BLAST of CX289131 vs. ExPASy Swiss-Prot
Match: GLR31_ARATH (Glutamate receptor 3.1 OS=Arabidopsis thaliana GN=GLR3.1 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 3.102e-22 Identity = 58/150 (38.67%), Postives = 81/150 (54.00%), Query Frame = 3 Query: 3 GFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRVCGQFRRFGXXXXXXXXXXXXAHDXXXXXXXXXXXXXFKDLIDFIDRKEAEIKEILKR-RNSDNKRPSQS 449 GFAF RDSPLA+D+STAIL LSE G+LQKIH++WL+ + CS G +L++ SFWG+FL+ GIAC +AL F ++ F + + + + F+D KE E K LKR RN+D+ + S Sbjct: 770 GFAFPRDSPLAVDMSTAILGLSETGELQKIHDRWLSKSNCSSPHGSQSGDSEQLNVHSFWGMFLVVGIACLVALFIHFFKIIRDFCK---------DTPEVVVEEAIPSPKSSRLTKLQTFLAFVDEKEEETKRRLKRKRNNDHSMNANS 910
BLAST of CX289131 vs. ExPASy Swiss-Prot
Match: GLR31_ORYSJ (Glutamate receptor 3.1 OS=Oryza sativa subsp. japonica GN=GLR3.1 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 1.303e-20 Identity = 61/142 (42.96%), Postives = 76/142 (53.52%), Query Frame = 3 Query: 3 GFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSM-DLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRVCGQFRRFGXXXXXXXXXXXXAHDXXXXXXXXXXXXXFKDLIDFIDRKEAEIKEILKRRNS 425 GFAF RDSPL++DLSTAIL+LSENGDLQ+IH+KWL + SM S D RL + SF LFLICG+AC AL C + Q+ R A D F + F DR+EA+I+ K + S Sbjct: 775 GFAFPRDSPLSVDLSTAILELSENGDLQRIHDKWLASDMSSMSQASELDQDPDRLDVYSFSALFLICGLACIFALAIHACNLFYQYSRHA-AEEDPAALQPSASDGSRSLSRRSKLQSF---LSFADRREADIRRAAKEKAS 912
BLAST of CX289131 vs. ExPASy Swiss-Prot
Match: GLR36_ARATH (Glutamate receptor 3.6 OS=Arabidopsis thaliana GN=GLR3.6 PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 2.903e-20 Identity = 49/85 (57.65%), Postives = 61/85 (71.76%), Query Frame = 3 Query: 3 GFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRVCGQF 257 GFAF R+SPLA+D+S AILQLSENGD+Q+I +KWL CS L A+ RL LKSFWGLF++CG+AC LAL + + QF Sbjct: 763 GFAFPRNSPLAVDVSAAILQLSENGDMQRIRDKWLLRKACS--LQGAEIEVDRLELKSFWGLFVVCGVACVLALAVYTVLMIRQF 845
BLAST of CX289131 vs. ExPASy Swiss-Prot
Match: GLR37_ARATH (Glutamate receptor 3.7 OS=Arabidopsis thaliana GN=GLR3.7 PE=2 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 2.543e-16 Identity = 54/147 (36.73%), Postives = 73/147 (49.66%), Query Frame = 3 Query: 3 GFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFFFCRVCGQFRRFGXXXXXXXXXXXXAHDXXXXXXXXXXXXXFKDLIDFIDRKEAEIKEILKRRNSDNKRPS 443 GFAF+RDSPLAID+STAIL+LSE LQ+I KWL C+ S + ++L LKSF GL+L+C A + F R+ QF R+ D ++F+D KE IK + +R + N PS Sbjct: 766 GFAFKRDSPLAIDMSTAILKLSETRKLQEIRKKWLCKTNCA-GKSNWNPEPNQLHLKSFKGLYLVCIAITVSAFLVFVLRMIRQFVRY----RRMERTSSMPRASWSASPTLRLRELVFDFVEFVDEKEEAIKRMFRRSDDSNNNPS 907
BLAST of CX289131 vs. ExPASy Swiss-Prot
Match: GLR28_ARATH (Glutamate receptor 2.8 OS=Arabidopsis thaliana GN=GLR2.8 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 1.543e-13 Identity = 40/78 (51.28%), Postives = 53/78 (67.95%), Query Frame = 3 Query: 3 GFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKW-LTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFF 233 GFAF R+SPL D+S AIL +++ ++Q I NKW + N+C + +RLSL+SFWGLFLI GIA FLAL+ F Sbjct: 760 GFAFPRNSPLTGDVSKAILNVTQGDEMQHIENKWFMKQNDCPDPKTALSS--NRLSLRSFWGLFLIAGIASFLALLIF 835
BLAST of CX289131 vs. ExPASy Swiss-Prot
Match: GLR27_ARATH (Glutamate receptor 2.7 OS=Arabidopsis thaliana GN=GLR2.7 PE=2 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.106e-11 Identity = 37/77 (48.05%), Postives = 48/77 (62.34%), Query Frame = 3 Query: 3 GFAFQRDSPLAIDLSTAILQLSENGDLQKIHNKWLTYNECSMDLSPADGGGSRLSLKSFWGLFLICGIACFLALIFF 233 GF F + SPL D+S AIL +++ ++Q I NKW DL+ + + LSL SFWGLFLI GIA FLAL+ F Sbjct: 765 GFVFPKKSPLTDDVSRAILNVTQGEEMQHIENKWFKKPNNCPDLNTSLSS-NHLSLSSFWGLFLIAGIASFLALLIF 840 The following BLAST results are available for this feature:
BLAST of CX289131 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 10
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX289131 ID=CX289131; Name=CX289131; organism=Citrus clementina; type=EST; length=563bpback to top |