CX289206
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289206 vs. ExPASy Swiss-Prot
Match: GNL3_DICDI (Guanine nucleotide-binding protein-like 3 homolog OS=Dictyostelium discoideum GN=gnl3 PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 3.223e-31 Identity = 64/127 (50.39%), Postives = 86/127 (67.72%), Query Frame = 2 Query: 5 VGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPP 385 VGATPG T+ QEV LDKNVKLLD PG+V +K G D +I LRN ++EK+ DP+ PV IL+RC ++ +Y++ + S DFL +VA R K+ KGGI D+ + A ++ DW GKIP+YT PP Sbjct: 291 VGATPGFTKFAQEVHLDKNVKLLDSPGIVPIK-GNVDENIILRNVVKLEKVLDPIAPVDAILSRCSQKQILDIYEIAQYQSTTDFLTQVAAKRKKIVKGGIADLRSTAISVIRDWTGGKIPFYTQPP 416
BLAST of CX289206 vs. ExPASy Swiss-Prot
Match: GNL3_CAEEL (Guanine nucleotide-binding protein-like 3 homolog OS=Caenorhabditis elegans GN=nst-1 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.729e-30 Identity = 65/142 (45.77%), Postives = 94/142 (66.20%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDA-SIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPSEARIV 424 NVG PG+T+ +QEV+LDKN++L+D PGV+++ + D +AL+N R++ L DP+ PV IL RC ++ Y L F+SVD FL ++A GKL++G DV AAA+ +L+DWN GK+ YYT PP +QG E +V Sbjct: 286 NVGNLPGITKEIQEVELDKNIRLIDSPGVILVSQKDLDPIEVALKNAIRVDNLLDPIAPVHAILRRCSKETIMLHYNLADFNSVDQFLAQLARRIGKLRRGARPDVNAAAKRVLNDWNTGKLRYYTHPP--EQGTAKEDIVV 425
BLAST of CX289206 vs. ExPASy Swiss-Prot
Match: GNL3_DROME (Guanine nucleotide-binding protein-like 3 homolog OS=Drosophila melanogaster GN=ns1 PE=1 SV=2) HSP 1 Score: 122.865 bits (307), Expect = 5.690e-28 Identity = 57/132 (43.18%), Postives = 84/132 (63.64%), Query Frame = 2 Query: 5 VGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQG 400 VG+TPG+T+SMQEV+LD +KL+DCPG+V GEN ++ L+N +R+ + DP + +L R ++Y + ++D+ ++F K A GK K G+ DV AAAR +L+DWN GKI Y T PP +G Sbjct: 295 VGSTPGVTKSMQEVELDSKIKLIDCPGIVFTSGGENSHAV-LKNAQRVGDVKDPFTIAESVLKRASKEYFCTMYDITNYDTFEEFFAKKAARMGKFLKKGVPDVVAAARSVLNDWNTGKIKYCTQPPEVQEG 425
BLAST of CX289206 vs. ExPASy Swiss-Prot
Match: GNL3L_BOVIN (Guanine nucleotide-binding protein-like 3-like protein OS=Bos taurus GN=GNL3L PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 4.817e-27 Identity = 66/146 (45.21%), Postives = 89/146 (60.96%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPS--EARIVSEL 433 +VGA PG+T+ MQEV LDK ++LLD PG+V ++ LRNC ++KL DPV PV+ IL RC + S Y + F + + FL VA GK KKGGI E AA+ +L DW GKI +YT+PP+ +P+ A IV E+ Sbjct: 272 SVGAVPGVTKFMQEVYLDKFIRLLDAPGIV--PGPNSEVGTILRNCIHVQKLADPVTPVETILQRCNLEEISSYYGVSGFQTTEHFLTAVAHRLGKKKKGGIYSQEQAAKAVLADWVSGKISFYTLPPS-THTLPTHLSAEIVKEM 414
BLAST of CX289206 vs. ExPASy Swiss-Prot
Match: GNL3L_MOUSE (Guanine nucleotide-binding protein-like 3-like protein OS=Mus musculus GN=Gnl3l PE=2 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 1.073e-26 Identity = 60/128 (46.88%), Postives = 80/128 (62.50%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPP 385 +VGA PG+T+ MQEV LDK ++LLD PG+V ++ LRNC ++KL DPV PV+ IL RC + S Y + F + + FL VA GK KKGG+ E AA+ +L DW GKI +YT+PP Sbjct: 273 SVGAVPGVTKFMQEVYLDKFIRLLDAPGIV--PGPNSEVGTILRNCIHVQKLADPVTPVETILQRCNLEEISSYYGVSGFQTTEHFLTAVAHRLGKKKKGGVYSQEQAAKAVLADWVSGKISFYTLPP 398
BLAST of CX289206 vs. ExPASy Swiss-Prot
Match: GNL3L_HUMAN (Guanine nucleotide-binding protein-like 3-like protein OS=Homo sapiens GN=GNL3L PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.955e-26 Identity = 64/146 (43.84%), Postives = 87/146 (59.59%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPS--EARIVSEL 433 +VGA PG+T+ MQEV LDK ++LLD PG+V ++ LRNC ++KL DPV PV+ IL RC + + Y + F + + FL VA GK KKGG+ E AA+ +L DW GKI +Y PPA +P+ A IV E+ Sbjct: 279 SVGAVPGITKFMQEVYLDKFIRLLDAPGIV--PGPNSEVGTILRNCVHVQKLADPVTPVETILQRCNLEEISNYYGVSGFQTTEHFLTAVAHRLGKKKKGGLYSQEQAAKAVLADWVSGKISFYIPPPA-THTLPTHLSAEIVKEM 421
BLAST of CX289206 vs. ExPASy Swiss-Prot
Match: GNL3_DANRE (Guanine nucleotide-binding protein-like 3 OS=Danio rerio GN=gnl3 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 8.799e-21 Identity = 58/146 (39.73%), Postives = 82/146 (56.16%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPS--EARIVSEL 433 N G GLTR MQEV + K VK++D PG++ S A +ALR+ + EK + P V+ +L +C ++ Y +P + S +FL A G L+KGG+ D E AA L+DW K+ YY+ P R QG+PS IV+EL Sbjct: 288 NAGVQRGLTRCMQEVHITKKVKMIDSPGILAALSNPGSA-MALRSLQVEEKEESPQEAVRNLLKQCNQQHVMLQYNVPDYRSSLEFLTTFAMKHGLLQKGGVADTELAATTFLNDWTGAKLSYYSRVPER-QGLPSYLSDAIVTEL 431
BLAST of CX289206 vs. ExPASy Swiss-Prot
Match: NOG2_HUMAN (Nucleolar GTP-binding protein 2 OS=Homo sapiens GN=GNL2 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 1.659e-19 Identity = 44/128 (34.38%), Postives = 75/128 (58.59%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPP 385 NV G T+ Q + L + + L+DCPGVV S +++ I L+ ++EK+ P + +L R + YK+ S+++ +DFL+K+A GKL KGG D++ +++L+DW G+IP++ PP Sbjct: 337 NVAPIAGETKVWQYITLMRRIFLIDCPGVVY-PSEDSETDIVLKGVVQVEKIKSPEDHIGAVLERAKPEYISKTYKIDSWENAEDFLEKLAFRTGKLLKGGEPDLQTVGKMVLNDWQRGRIPFFVKPP 463
BLAST of CX289206 vs. ExPASy Swiss-Prot
Match: NOG2_MOUSE (Nucleolar GTP-binding protein 2 OS=Mus musculus GN=Gnl2 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 2.167e-19 Identity = 46/140 (32.86%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMPPARDQGIPSEARI 421 NV G T+ Q + L + + L+DCPGVV S +++ I L+ ++EK+ P + +L R + YK+ S+++ +DFL+K+A GKL KGG D+ ++++L+DW G+IP++ PP + IP+++++ Sbjct: 337 NVAPIAGETKVWQYITLMRRIFLIDCPGVVY-PSEDSETDIVLKGVVQVEKIKAPQDHIGAVLERAKPEYISKTYKIESWENAEDFLEKLALRTGKLLKGGEPDMLTVSKMVLNDWQRGRIPFFVKPPNAE--IPTDSQL 473
BLAST of CX289206 vs. ExPASy Swiss-Prot
Match: NOG2_SCHPO (Nucleolar GTP-binding protein 2 OS=Schizosaccharomyces pombe GN=nog2 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 1.405e-18 Identity = 45/127 (35.43%), Postives = 74/127 (58.27%), Query Frame = 2 Query: 2 NVGATPGLTRSMQEVQLDKNVKLLDCPGVVMLKSGENDASIALRNCKRIEKLDDPVGPVKEILNRCPANLLISLYKLPSFDSVDDFLQKVATVRGKLKKGGIVDVEAAARIILHDWNEGKIPYYTMP 382 NV PG T+ Q V L K + L+DCPG+V S ++DA + L+ R+E + +P + +L+RC L Y++ ++ +FL K+A G+L KGG D + A+++L+D+ GKIP++ P Sbjct: 337 NVAPIPGETKVWQYVALMKRIFLIDCPGIVPPSSNDSDAELLLKGVVRVENVSNPEAYIPTVLSRCKVKHLERTYEISGWNDSTEFLAKLAKKGGRLLKGGEPDEASVAKMVLNDFMRGKIPWFIGP 463 The following BLAST results are available for this feature:
BLAST of CX289206 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289206 ID=CX289206; Name=CX289206; organism=Citrus clementina; type=EST; length=433bpback to top |