CX289268
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX289268 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 2.839e-83 Identity = 146/202 (72.28%), Postives = 170/202 (84.16%), Query Frame = 2 Query: 2 GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS 607 GF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GEPLTV G+QTR+ Sbjct: 98 GFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRA 298
BLAST of CX289268 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 2.839e-83 Identity = 146/202 (72.28%), Postives = 170/202 (84.16%), Query Frame = 2 Query: 2 GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS 607 GF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GEPLTV G+QTR+ Sbjct: 98 GFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRA 298
BLAST of CX289268 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 2.839e-83 Identity = 146/202 (72.28%), Postives = 170/202 (84.16%), Query Frame = 2 Query: 2 GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS 607 GF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GEPLTV G+QTR+ Sbjct: 98 GFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRA 298
BLAST of CX289268 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1) HSP 1 Score: 307.76 bits (787), Expect = 2.839e-83 Identity = 146/202 (72.28%), Postives = 170/202 (84.16%), Query Frame = 2 Query: 2 GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS 607 GF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GEPLTV G+QTR+ Sbjct: 98 GFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRA 298
BLAST of CX289268 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1) HSP 1 Score: 303.908 bits (777), Expect = 4.100e-82 Identity = 145/202 (71.78%), Postives = 168/202 (83.17%), Query Frame = 2 Query: 2 GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS 607 GF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+GPRM+++DGRVVSNFI QA++GE LTV G QTR+ Sbjct: 99 GFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEQLTVYGSGEQTRA 299
BLAST of CX289268 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2) HSP 1 Score: 301.982 bits (772), Expect = 1.558e-81 Identity = 144/202 (71.29%), Postives = 169/202 (83.66%), Query Frame = 2 Query: 2 GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMNIDDGRVVSNFIAQAIRGEPLTVQAPGTQTRS 607 GF+GSHL DKLM + +EV VVDN+FTG K N+ WIGH FELI HDV EPL IEVDQIYHLA PASP Y YNP+KT+KTN IGTLNMLGLAKRVGAR+LL STSEVYGDP VHPQ+E YWG+VNPIG R+CYDEGKRVAET+ + Y +Q G+E+R+ARIFNT+G RM+++DGRVVSNFI QA++GE LTV G+QTR+ Sbjct: 96 GFVGSHLTDKLMM-DGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMNDGRVVSNFILQALQGEALTVYGSGSQTRA 296
BLAST of CX289268 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 2.616e-20 Identity = 71/210 (33.81%), Postives = 110/210 (52.38%), Query Frame = 2 Query: 2 GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVTEPLLIE------VDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKR--VGARILLTSTSEVYGDPLVHPQDESYWGNVNPIGVRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN-IDDGRVVSNFIAQAIRGEPLTVQAPGTQTR 604 GFIGSH+VDKL+EN +VI++DN TG+K+N+ +P+ E + D+ + L E V+ + H A + NPV NV+GT+N+L + ++ + + +S VYG+P P DE++ PI S Y K V E + Y+R +GIE I R N YG R + + V+S FI + ++ + + G QTR Sbjct: 9 GFIGSHIVDKLIEN-NYDVIILDNLTTGNKNNI-----NPKAEFVNADIRDKDLDEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVDENH-----PINPLSPYGLSKYVGEEYIKLYNRLYGIEYAILRYSNVYGERQDPKGEAGVISIFIDKMLKNQSPIIFGDGNQTR 207
BLAST of CX289268 vs. ExPASy Swiss-Prot
Match: ARNA_PECCP (Bifunctional polymyxin resistance protein arnA OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=arnA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.755e-16 Identity = 62/216 (28.70%), Postives = 106/216 (49.07%), Query Frame = 2 Query: 2 GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTR 604 GFIG+HL ++L+ +++ E+ +D S D + +++G PRF + D++ E + + D I L A+PI Y NP++ + + L ++ R RI+ STSEVYG D +D S V PI R Y K++ + +++ Y ++G+ + R FN GPR++ I R ++ I + G P+ + G Q R Sbjct: 331 GFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFLGDPRFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKNGLRFTLFRPFNWMGPRLDTLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKR 541
BLAST of CX289268 vs. ExPASy Swiss-Prot
Match: ARNA_ERWCT (Bifunctional polymyxin resistance protein arnA OS=Erwinia carotovora subsp. atroseptica GN=arnA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 1.755e-16 Identity = 62/216 (28.70%), Postives = 106/216 (49.07%), Query Frame = 2 Query: 2 GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTR 604 GFIG+HL ++L+ +++ E+ +D S D + +++G PRF + D++ E + + D I L A+PI Y NP++ + + L ++ R RI+ STSEVYG D +D S V PI R Y K++ + +++ Y ++G+ + R FN GPR++ I R ++ I + G P+ + G Q R Sbjct: 332 GFIGNHLTERLLRDDRYEIYGLDI----SSDAIARFLGDPRFHFVEGDISIHNEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVRYNKRIVFPSTSEVYGMCDDKEFDEDTSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKNGLRFTLFRPFNWMGPRLDTLDAARIGSSRAITQLILNLVEGSPIKLVDGGAQKR 542
BLAST of CX289268 vs. ExPASy Swiss-Prot
Match: ARNA_SERP5 (Bifunctional polymyxin resistance protein arnA OS=Serratia proteamaculans (strain 568) GN=arnA PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 3.909e-16 Identity = 61/216 (28.24%), Postives = 108/216 (50.00%), Query Frame = 2 Query: 2 GFIGSHLVDKLMENEKNEVIVVDNYFTGSKDNLRKWIGHPRFELIRHDVT------EPLLIEVDQIYHLACPASPIFYKYNPVKTIKTNVIGTLNMLGLAKRVGARILLTSTSEVYG--DPLVHPQDESYWGNVNPIG-VRSCYDEGKRVAETLMFDYHRQHGIEIRIARIFNTYGPRMN------IDDGRVVSNFIAQAIRGEPLTVQAPGTQTR 604 GFIG+HL ++L+ +++ ++ +D GS D + +++G+PRF + D++ E + + D I L A+PI Y NP++ + + L ++ + RI+ STSEVYG D +D S V PI R Y K++ + +++ Y + G++ + R FN GPR++ I R ++ I + G P+ + G Q R Sbjct: 325 GFIGNHLTERLLRDDRYDIYGLD---IGS-DAISRFLGNPRFHFVEGDISIHSEWIEYHIKKCDVILPLVAIATPIEYTRNPLRVFELDFEENLKIVRDCVKYNKRIIFPSTSEVYGMCDDKEFDEDHSRL-IVGPINKQRWIYSVSKQLLDRVIWAYGAKEGLKFTLFRPFNWMGPRLDNLDAARIGSSRAITQLILNLVEGSPIKLMDGGAQKR 535 The following BLAST results are available for this feature:
BLAST of CX289268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 91
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289268 ID=CX289268; Name=CX289268; organism=Citrus clementina; type=EST; length=608bpback to top |