CX289487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PEX1_DICDI (Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1 PE=3 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 3.197e-57 Identity = 105/153 (68.63%), Postives = 126/153 (82.35%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 GCGKT + A A C L FISVKGPELLNKYIG+SEQ VRD+FS+A++A PC+LFFDEFDSIAP+RGHDN+GVTDRVVNQFLT+LDGVE LTGV+V AATSRPDL+D ALLRPGRLD+ L+C+ P ERLDIL + K+ L+ + LE ++ Sbjct: 910 GCGKTLLASAIAGECGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDNSGVTDRVVNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERLDILTCLKSKMNLSPSISLEQLS 1062
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PEX1_HUMAN (Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1) HSP 1 Score: 214.927 bits (546), Expect = 1.343e-55 Identity = 107/153 (69.93%), Postives = 124/153 (81.05%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + G A + FISVKGPELL+KYIGASEQAVRDIF +A AA PC+LFFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALLRPGRLD+ ++C P RL+IL V+S LPLADDVDL+ +A Sbjct: 884 GTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILNVLSDSLPLADDVDLQHVA 1036
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PEX1_MOUSE (Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2) HSP 1 Score: 213.001 bits (541), Expect = 5.104e-55 Identity = 104/153 (67.97%), Postives = 124/153 (81.05%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + G A + FIS+KGPELL+KYIGASEQAVRD+F +A AA PC+LFFDEF+SIAP+RGHDNTGVTDRVVNQ LT+LDGVE L GV+V AATSRPDL+D ALLRPGRLD+ ++C P RL+IL V+S+ L LADDVDL+ +A Sbjct: 885 GTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDNTGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPPPDQVSRLEILTVLSKSLALADDVDLQHVA 1037
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PEX1_PICPA (Peroxisome biosynthesis protein PAS1 OS=Pichia pastoris GN=PEX1 PE=3 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.137e-54 Identity = 99/153 (64.71%), Postives = 125/153 (81.70%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 GCGKT + A AA C L FIS+KGPE+LNKYIG SEQ+VR++F +A AA PC+LFFDEFDSIAPKRGHD+TGVTDRVVNQ LT++DG E L GV+V AATSRPDL+D+ALLRPGRLD+ + CD P +RLDIL+ ++R + ++ V+L ++A Sbjct: 843 GCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDRLDILQSVTRNMNVSKSVNLSSVA 995
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PEX1_YEAST (Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae GN=PEX1 PE=1 SV=2) HSP 1 Score: 201.83 bits (512), Expect = 1.177e-51 Identity = 98/162 (60.49%), Postives = 122/162 (75.31%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVI---------SRKLPLADDVDLEAIA 460 GCGKT + A A C L FISVKGPE+LNK+IGASEQ +R++F +A + PC+LFFDEFDSIAPKRGHD+TGVTDRVVNQ LT++DG E L GV++ AATSRPDL+D+ALLRPGRLD+ + C+ P+ ERLDIL+ I +K L + DL+ IA Sbjct: 741 GCGKTLLASAVAQQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHDSTGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTESERLDILQAIVNSKDKDTGQKKFALEKNADLKLIA 902
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: PEX1_SCHPO (Peroxisomal ATPase pex1 OS=Schizosaccharomyces pombe GN=pex1 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 4.943e-50 Identity = 88/153 (57.52%), Postives = 123/153 (80.39%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 GCGKT++ A ++ ++FIS+KGPELL+KYIG SEQ VRD+FS+A A PC+LFFDEFDS+AP+RG D+TGVTDRVVNQ LT++DG E L GV++ AAT+RPD++D ALLRPGRLD+L+FCD P+ ERL++L+ ++ + + + L+ ++ Sbjct: 650 GCGKTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVAPRRGQDSTGVTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIFCDLPNEEERLEVLQKLANRFHIENAAMLKKLS 802
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: NVL_DICDI (Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum GN=nvl PE=3 SV=1) HSP 1 Score: 187.963 bits (476), Expect = 1.758e-47 Identity = 87/152 (57.24%), Postives = 118/152 (77.63%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTG---VTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDL 448 GCGKT + A A+ C FISVKGPELLNKY+G SE+AVR +F +A A++PC++FFDEFD++APKRG + G T+RVVNQ LTE+DG+E + VF+ AAT+RPD++DAA+ RPGRLD++++ PSP ER +ILK ++ K+P+ DVDL Sbjct: 610 GCGKTLLAKAIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALAPKRGGGDGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPEERCEILKTLTHKIPIHQDVDL 761 HSP 2 Score: 90.8929 bits (224), Expect = 2.925e-18 Identity = 62/203 (30.54%), Postives = 87/203 (42.86%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTG--------------------------------------------------VFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 GCGKT + A A + ++ E+ + G SE VR +FS A A APC++F DE D+IAPKR + + R+V+Q LT +D + L+ V V AT+RP+ LD AL GR D+ + P R ILKVI+ K+ L ++ D E IA Sbjct: 260 GCGKTLLAKAIAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKRESASKDMERRIVSQLLTCMDSLNYLSSNNSTNEPNEQTEQQQQQQQDIIEVDSQATTTTTASNNNNKQQKNDFKKGHVIVIGATNRPESLDTALRIGGRFDKEICLGIPDQTARCKILKVITSKMRLENNFDYEEIA 462
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: NVL_HUMAN (Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1 SV=1) HSP 1 Score: 174.866 bits (442), Expect = 1.540e-43 Identity = 88/156 (56.41%), Postives = 112/156 (71.79%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR---KLPLADDVDLEAIA 460 GCGKT + A A L FISVKGPELLN Y+G SE+AVR +F +A +APC++FFDE D++ P+R TG + RVVNQ LTE+DG+E VF+ AAT+RPD++D A+LRPGRLD+ LF P P +RL ILK I++ K PL DV+LEAIA Sbjct: 625 GCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRLAILKTITKNGTKPPLDADVNLEAIA 780 HSP 2 Score: 111.694 bits (278), Expect = 1.601e-24 Identity = 63/158 (39.87%), Postives = 87/158 (55.06%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLT---ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 GCGKT + A A L + V PE+++ G SEQ +R++F +A + APC++F DE D+I PKR + + R+V Q LT +L+ V V V AT+RPD LD AL R GR DR + P R IL+ + RKL L D +AH+ Sbjct: 308 GCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGIPDEASRERILQTLCRKLRLPQAFDFCHLAHL 465
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: NVL_MOUSE (Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=2 SV=1) HSP 1 Score: 174.096 bits (440), Expect = 2.627e-43 Identity = 86/157 (54.78%), Postives = 113/157 (71.97%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISR---KLPLADDVDLEAIAH 463 GCGKT + A A L FISVKGPELLN Y+G SE+AVR +F +A +APC++FFDE D++ P+R TG + RVVNQ LTE+DG+E VF+ AAT+RPD++D A+LRPGRLD+ LF P P +R+ ILK I++ K PL +DV+LE IA+ Sbjct: 624 GCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPPADRVAILKTITKNGTKPPLDEDVNLETIAN 780 HSP 2 Score: 109.768 bits (273), Expect = 6.085e-24 Identity = 62/158 (39.24%), Postives = 88/158 (55.70%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLT---ELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIAHM 466 GCGKT + A A L + V PE+++ G SEQ +R++F +A + APC++F DE D+I PKR + + R+V Q LT +L+ V V V AT+RPD LD AL R GR DR + P R IL+ + RKL L + + +AH+ Sbjct: 307 GCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFDQAVSNAPCIVFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREVCLGIPDEAARERILQTLCRKLRLPETFNFCHLAHL 464
BLAST of CX289487 vs. ExPASy Swiss-Prot
Match: Y1156_METJA (Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus jannaschii GN=MJ1156 PE=3 SV=1) HSP 1 Score: 172.94 bits (437), Expect = 5.853e-43 Identity = 86/154 (55.84%), Postives = 114/154 (74.03%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHD-NTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A FISVKGPE+ +K++G SE+A+R+IF KA +APC++FFDE D+IAPKRG D ++ VTD+VVNQ LTELDG+E V V AAT+RPD++D ALLRPGRLDR++ P + RLDI K+ +R + LA+DV+LE +A Sbjct: 496 GTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRGRDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPDEKARLDIFKIHTRSMNLAEDVNLEELA 649 HSP 2 Score: 126.716 bits (317), Expect = 4.810e-29 Identity = 66/153 (43.14%), Postives = 94/153 (61.44%), Query Frame = 2 Query: 2 GCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKATAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSPRERLDILKVISRKLPLADDVDLEAIA 460 G GKT + A A F + GPE+++KY+G +E+ +R IF +A AP ++F DE D+IAPKR V R+V Q LT +DG++ V V AT+RP+ LD AL RPGR DR + P R +IL++ +R +PLA+DVDL+ +A Sbjct: 223 GTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDREGRKEILQIHTRNMPLAEDVDLDYLA 375 The following BLAST results are available for this feature:
BLAST of CX289487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 372
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Sequences
The
following sequences are available for this feature:
EST sequence >CX289487 ID=CX289487; Name=CX289487; organism=Citrus clementina; type=EST; length=468bpback to top |