CX290251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP24_ARATH (Ubiquitin carboxyl-terminal hydrolase 24 OS=Arabidopsis thaliana GN=UBP24 PE=1 SV=1) HSP 1 Score: 318.931 bits (816), Expect = 1.885e-86 Identity = 162/210 (77.14%), Postives = 177/210 (84.29%), Query Frame = 1 Query: 16 DEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 645 DEWETVGPKNKSAVTRTQSF+PS LS+IFGGQLKSVVKA+G KASATVQP+LLLHLDI+ + V IEDAL LFSA E+LEGYR S TG GVV+A KS+KIQ LSKI+ILHLMRFSYGSQGSTKL K V+FPL+L L R LV+ S E +YELVAT+THHG DPSKGHYT DAR N QWL FDDASVT IGT VLHDQAYVLFYKQV Sbjct: 342 DEWETVGPKNKSAVTRTQSFVPSELSEIFGGQLKSVVKAKGTKASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTGKTGVVSASKSIKIQKLSKIMILHLMRFSYGSQGSTKLRKGVKFPLELNLNRSHLVSLSNESLRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGTKLVLHDQAYVLFYKQV 551
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBPB_DICDI (Ubiquitin hydrolase B OS=Dictyostelium discoideum GN=ubpB PE=1 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.113e-37 Identity = 91/213 (42.72%), Postives = 128/213 (60.09%), Query Frame = 1 Query: 16 DEWETVGPKNKSAV-TRTQSFLPSA-LSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADA-RYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQV 645 D WE VG K K+A+ T +Q LP +S IF G L+S G+K S TV+PF LHLDI E ++++EDAL+ F PE +EGY T ST ++A KS ++L +ILI+H RF++ S S KL K +RFP QL L + +KY L + V+HHGR S+GHYT D + QW+ +DD++ T + VL+ +AY+L Y+ V Sbjct: 243 DNWEVVGKKGKTAIITNSQQELPKTPISQIFSGVLRSSFNRTGSKESITVEPFYCLHLDIRPEEINSLEDALKFFMKPEIIEGY-TCSTKKI-EISASKSWSFESLPRILIVHFKRFAFESDTSKKLDKLIRFPTQLSLS---TASNHQTQKKYSLFSVVSHHGRGLSQGHYTCDIYQPQQAQWIRYDDSTFTEVKEQDVLNREAYLLLYQLV 450
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP10_HUMAN (Ubiquitin carboxyl-terminal hydrolase 10 OS=Homo sapiens GN=USP10 PE=1 SV=2) HSP 1 Score: 154.451 bits (389), Expect = 6.147e-37 Identity = 87/225 (38.67%), Postives = 130/225 (57.78%), Query Frame = 1 Query: 7 GTRDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVL----HDQAYVLFYKQV 645 G+ DEWE VGP+NK++VTR F+ + ++ IFGG ++SVV Q +K SAT+QPF L LDI S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y G KL K++ +P+ L + ++LL +P + R Y L A V HHG + GHYT D + WL DD +V I +V+ AY+L+Y++V Sbjct: 575 GSEDEWEQVGPRNKTSVTRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQPFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEISRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLIKNIEYPVDLEISKELL-SPGVKNKNFKCHRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKPTAERTAYLLYYRRV 795
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP10_MOUSE (Ubiquitin carboxyl-terminal hydrolase 10 OS=Mus musculus GN=Usp10 PE=1 SV=2) HSP 1 Score: 151.754 bits (382), Expect = 3.985e-36 Identity = 87/225 (38.67%), Postives = 129/225 (57.33%), Query Frame = 1 Query: 7 GTRDEWETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS-TKLHKSVRFPLQLVLGRDLLVTPSAEG------RKYELVATVTHHGRDPSKGHYTADARYFN-DQWLHFDDASVTAIGTSKVLHD----QAYVLFYKQV 645 G+ DEWE VGPKNK+++TR F+ + ++ IFGG ++SVV Q +K SAT+Q F L LDI S+ + T++DAL A E+++GY T + V + V ++ L +L+LHL RF Y G KL K++ +P+ L + R+LL +P + R Y L A V HHG + GHYT D + WL DD +V I +V+ AY+L+Y++V Sbjct: 569 GSEDEWEQVGPKNKTSITRQADFVQTPITGIFGGHIRSVVYQQSSKESATLQLFFTLQLDIQSDKIRTVQDALESLVARESVQGYTTKTKQE---VEVSRRVTLEKLPPVLVLHLKRFVYEKTGGCQKLVKNIDYPVDLEISRELL-SPGIKNKNFKCQRTYRLFAVVYHHGNSATGGHYTTDVFQIGLNGWLRIDDQTVKVINQYQVVKPPADRTAYLLYYRRV 789
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP3_SCHPO (Probable ubiquitin carboxyl-terminal hydrolase 3 OS=Schizosaccharomyces pombe GN=ubp3 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.982e-27 Identity = 79/226 (34.96%), Postives = 118/226 (52.21%), Query Frame = 1 Query: 22 WETVGPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGST-KLHKSVRFPLQLVLGRDLLVTPSAEGR---KYELVATVTHHGRDPSKGHYTADARYFNDQ-WLHFDDASVTAI--------------GTSKVLHDQ--AYVLFY 636 W VG K + R+ + S +S IFGGQL+S ++ + S ++PF L LDI +E +H++ DAL +APE L + +S G VTA K + I++L +LILHL RF Y + G T K +K + +P +L + +++ +PS G +Y+L A V HHG S GHYT D + + W DD + + SK+ H AY+LFY Sbjct: 288 WTEVGKNKKPVIARSATVERSPISQIFGGQLRSTLRVPSARDSVLLEPFQPLQLDIQAEDIHSVIDALEHMTAPEILPEWHSSK----GNVTATKQMYIESLPPVLILHLKRFFYEASGGTQKNYKPIAYPARLSIPQNVF-SPSVRGSIHPEYDLNAVVYHHGTSASGGHYTVDVQQLDKSGWFRIDDTHIHRVPIHDVENSELSADPSLSKLGHGDRVAYLLFY 508
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP3_YEAST (Ubiquitin carboxyl-terminal hydrolase 3 OS=Saccharomyces cerevisiae GN=UBP3 PE=1 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.376e-20 Identity = 71/236 (30.08%), Postives = 113/236 (47.88%), Query Frame = 1 Query: 34 GPKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQGNK--ASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGS---------------TKLHKSVRFPLQLVLGRDLLV-------TPSAEGRKYELVATVTHHGRDPSKGHYTADARYF-NDQWLHFDDASVTAIGTSKVLHD--------QAYVLFYKQ 642 G K K+A RT +PS +S +FGGQ +SV+ NK S T+ PF + LDI V+ +E A + FS E L SS+GN V AKK I L ++L++ RFS+ + + K+ K +++ +L++ + + T + R+Y+L + HHG GHYTAD + +++W DD ++T + VL AY+L Y++ Sbjct: 679 GKKTKTAAKRTVEIVPSPISKLFGGQFRSVLDIPNNKESQSITLDPFQTIQLDISDAGVNDLETAFKKFSEYELLP--FKSSSGND--VEAKKQTFIDKLPQVLLIQFKRFSFINNVNKDNAMTNYNAYNGRIEKIRKKIKYGHELIIPEESMSSITLKNNTSGIDDRRYKLTGVIYHHGVSSDGGHYTADVYHSEHNKWYRIDDVNITELEDDDVLKGGEEASDSRTAYILMYQK 910
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP8_HUMAN (Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8 PE=1 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 7.550e-19 Identity = 65/188 (34.57%), Postives = 95/188 (50.53%), Query Frame = 1 Query: 82 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 S + +F GQ KS V+ +K S T + F+ L L + S + T++D LRLFS E L + R + + K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +KY L + H+G GHYTA + +W FDD V+ I S V AY+LFY Sbjct: 920 SIIVALFQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNNLKKYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVKSSAAYILFY 1106
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP8_MOUSE (Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8 PE=1 SV=2) HSP 1 Score: 92.8189 bits (229), Expect = 2.197e-18 Identity = 64/188 (34.04%), Postives = 94/188 (50.00%), Query Frame = 1 Query: 82 SALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENL-EGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADAR-YFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 S + +F GQ KS V+ + S T + F+ L L + S + T++D LRLFS E L + R + + K ++I L +L++HL RFSY + KL SV FPL+ + ++ P +KY L + H+G GHYTA + +W FDD V+ I S V AY+LFY Sbjct: 882 SIIVALFQGQFKSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRFSYDGRWKQKLQTSVDFPLENLDLSQYVIGPKNSLKKYNLFSVSNHYG-GLDGGHYTAYCKNAARQRWFKFDDHEVSDISVSSVRSSAAYILFY 1068
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: U17L5_HUMAN (Ubiquitin carboxyl-terminal hydrolase 17-like protein 5 OS=Homo sapiens GN=USP17L5 PE=3 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.056e-16 Identity = 64/187 (34.22%), Postives = 92/187 (49.20%), Query Frame = 1 Query: 88 LSDIFGGQLKSVVKA-QGNKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNA-GVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAEGRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFYKQ 642 + IFGG +S +K + S T P+L + LDI +A +++ AL + PE L G G A K++ + T +K+LIL L RFS K+ K+V++P L + + + P+ Y L A + H G GHY + + QW DDA VTA + VL QAYVLFY Q Sbjct: 193 IHQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDI--QAAQSVQQALEQLAKPEELNGENAYHCGVCLQRAPASKTLTLHTSAKVLILVLKRFS--DVTGNKIAKNVQYPECLDM-QPYMSQPNTGPLVYVLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFYIQ 374
BLAST of CX290251 vs. ExPASy Swiss-Prot
Match: UBP21_ARATH (Ubiquitin carboxyl-terminal hydrolase 21 OS=Arabidopsis thaliana GN=UBP21 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.685e-16 Identity = 65/202 (32.18%), Postives = 95/202 (47.03%), Query Frame = 1 Query: 37 PKNKSAVTRTQSFLPSALSDIFGGQLKSVVKAQG-NKASATVQPFLLLHLDIYSEAVHTIEDALRLFSAPENLEGYRTSSTGNAGVVTAKKSVKIQTLSKILILHLMRFSYGSQGSTKLHKSVRFPLQLVLGRDLLVTPSAE-GRKYELVATVTHHGRDPSKGHYTADARYFNDQWLHFDDASVTAIGTSKVLHDQAYVLFY 636 PKN+ +Q + + ++FGG L S + N S T +P L L+I E V+T+ AL F+ E LE T V T +K ++ L + HL RF+ K+ + FPL+L L + E +Y L A V H G + GHY++ R + W +FDD+ VT I +VL AY+LFY Sbjct: 270 PKNQLGSVSSQDL--NIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEI--EDVNTLWKALESFTCVEKLEDQLTCDNCKEKV-TKEKQLRFDKLPPVATFHLKRFTNDGVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRYHLYAFVEHIGIRATFGHYSSYVRSAPETWHNFDDSKVTRISEERVLSRPAYILFY 466 The following BLAST results are available for this feature:
BLAST of CX290251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 99
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX290251 ID=CX290251; Name=CX290251; organism=Citrus clementina; type=EST; length=766bpback to top |