CX290883
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3A_ARATH (Proteasome subunit beta type-3-A OS=Arabidopsis thaliana GN=PBC1 PE=1 SV=2) HSP 1 Score: 231.876 bits (590), Expect = 7.805e-61 Identity = 113/121 (93.39%), Postives = 117/121 (96.69%), Query Frame = 1 Query: 58 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMDS 420 EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDR+FIGLSGLATD QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGPY CQP IAGL D+DKPFICTMDS Sbjct: 5 EYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRVFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPYLCQPVIAGLGDDDKPFICTMDS 125
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3B_ARATH (Proteasome subunit beta type-3-B OS=Arabidopsis thaliana GN=PBC2 PE=1 SV=1) HSP 1 Score: 227.639 bits (579), Expect = 1.472e-59 Identity = 111/121 (91.74%), Postives = 116/121 (95.87%), Query Frame = 1 Query: 58 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMDS 420 EYNGSA+VAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHD LFIGLSGLATD QTLYQRLVFRHKLYQLREERDMKPETFASLVSA+LYEKRFGP+ CQP IAGL D++KPFICTMDS Sbjct: 5 EYNGSAVVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDHLFIGLSGLATDVQTLYQRLVFRHKLYQLREERDMKPETFASLVSAILYEKRFGPFLCQPVIAGLGDDNKPFICTMDS 125
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3_PICMA (Proteasome subunit beta type-3 OS=Picea mariana GN=PBC1 PE=2 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 1.246e-58 Identity = 108/121 (89.26%), Postives = 115/121 (95.04%), Query Frame = 1 Query: 58 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMDS 420 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRI KIHD+L++GLSGLATD QTLYQR FRHKLYQLREER+M+PETFASLVSALLYEKRFGPYFCQP IAGL ++DKPFICTMDS Sbjct: 5 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRIFKIHDKLYVGLSGLATDVQTLYQRFAFRHKLYQLREERNMRPETFASLVSALLYEKRFGPYFCQPVIAGLGEDDKPFICTMDS 125
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3_ORYSJ (Proteasome subunit beta type-3 OS=Oryza sativa subsp. japonica GN=PBC1 PE=2 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 1.627e-58 Identity = 106/120 (88.33%), Postives = 117/120 (97.50%), Query Frame = 1 Query: 58 EYNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDKPFICTMD 417 EYNGSA+VAMVGKNCFAIASDRRLGVQLQT+ATDFQR+ KIHD+L+IGLSGLATD+QTLYQRLVFRHKLYQLREERDMKP+TFASLVSALLYEKRFGPYFCQP IAGL ++++PFICTMD Sbjct: 5 EYNGSAVVAMVGKNCFAIASDRRLGVQLQTVATDFQRVFKIHDKLYIGLSGLATDAQTLYQRLVFRHKLYQLREERDMKPQTFASLVSALLYEKRFGPYFCQPVIAGLGEDNEPFICTMD 124
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3_DICDI (Proteasome subunit beta type-3 OS=Dictyostelium discoideum GN=psmB3 PE=3 SV=1) HSP 1 Score: 156.377 bits (394), Expect = 4.168e-38 Identity = 73/120 (60.83%), Postives = 92/120 (76.67%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDEDK-PFICTMD 417 YNG A + MVGKNC AIASD R G+Q QTI+ DF ++ +I+D+ F+G+SGL TD+QTLYQ+LVFRH LY+LREERDM P ++L++ +LYEKRFGPYF +P I GL D PFI MD Sbjct: 6 YNGGACIVMVGKNCVAIASDLRFGIQQQTISNDFPKVYRINDKCFVGISGLVTDAQTLYQKLVFRHNLYKLREERDMSPRVVSNLLTNMLYEKRFGPYFTEPLICGLEGPDNTPFISGMD 125
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3_RAT (Proteasome subunit beta type-3 OS=Rattus norvegicus GN=Psmb3 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.987e-36 Identity = 73/120 (60.83%), Postives = 93/120 (77.50%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDED-KPFICTMD 417 YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +P IAGL + KPFIC++D Sbjct: 6 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLD 125
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3_ONCMY (Proteasome subunit beta type-3 OS=Oncorhynchus mykiss GN=psmb3 PE=2 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.987e-36 Identity = 73/120 (60.83%), Postives = 94/120 (78.33%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDED-KPFICTMD 417 YNG A++AM GK C AIA+DRR GVQ Q + TDFQ+I + DRL+IGL+GLATD QT+ QRL FR LY+L+E R +KP+TF S+VS LLYE+RFGPY+ +P IAGL + +PFIC++D Sbjct: 6 YNGGAVMAMKGKQCVAIAADRRFGVQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVSQRLKFRLNLYELKEGRQIKPKTFMSMVSNLLYERRFGPYYIEPVIAGLDPKTFEPFICSLD 125
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3_MOUSE (Proteasome subunit beta type-3 OS=Mus musculus GN=Psmb3 PE=1 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 2.987e-36 Identity = 73/120 (60.83%), Postives = 93/120 (77.50%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDED-KPFICTMD 417 YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +P IAGL + KPFIC++D Sbjct: 6 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLD 125
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3_HUMAN (Proteasome subunit beta type-3 OS=Homo sapiens GN=PSMB3 PE=1 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 2.987e-36 Identity = 73/120 (60.83%), Postives = 93/120 (77.50%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDED-KPFICTMD 417 YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +P IAGL + KPFIC++D Sbjct: 6 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLD 125
BLAST of CX290883 vs. ExPASy Swiss-Prot
Match: PSB3_BOVIN (Proteasome subunit beta type-3 OS=Bos taurus GN=PSMB3 PE=1 SV=3) HSP 1 Score: 150.214 bits (378), Expect = 2.987e-36 Identity = 73/120 (60.83%), Postives = 93/120 (77.50%), Query Frame = 1 Query: 61 YNGSALVAMVGKNCFAIASDRRLGVQLQTIATDFQRISKIHDRLFIGLSGLATDSQTLYQRLVFRHKLYQLREERDMKPETFASLVSALLYEKRFGPYFCQPAIAGLSDED-KPFICTMD 417 YNG A++AM GKNC AIA+DRR G+Q Q + TDFQ+I + DRL+IGL+GLATD QT+ QRL FR LY+L+E R +KP T S+V+ LLYEKRFGPY+ +P IAGL + KPFIC++D Sbjct: 6 YNGGAVMAMKGKNCVAIAADRRFGIQAQMVTTDFQKIFPMGDRLYIGLAGLATDVQTVAQRLKFRLNLYELKEGRQIKPYTLMSMVANLLYEKRFGPYYTEPVIAGLDPKTFKPFICSLD 125 The following BLAST results are available for this feature:
BLAST of CX290883 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >CX290883 ID=CX290883; Name=CX290883; organism=Citrus clementina; type=EST; length=421bpback to top |