CX292219
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX292219 vs. ExPASy Swiss-Prot
Match: KEG_ARATH (E3 ubiquitin-protein ligase KEG OS=Arabidopsis thaliana GN=KEG PE=1 SV=2) HSP 1 Score: 235.728 bits (600), Expect = 1.979e-61 Identity = 105/128 (82.03%), Postives = 119/128 (92.97%), Query Frame = 1 Query: 22 ELQIGDWVRVRASVTTPTYQWGEVSHSSIGVVHRMESGELWVAFCFTERLWLCKAWEMERVRPFKVGDKVRIKEGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFQWREGRPWIGDPADIVLDECS 405 EL+IGDWVRV+AS+TTPTYQWGEV+ SS GVVHRME G+L V+FCF +RLWLCKA E+ER+RPF++GD+V+IK+GLVTPRWGWGMETHASKG VVGVDANGKLRIKF WREGRPWIGDPADIVLDE S Sbjct: 1497 ELKIGDWVRVKASITTPTYQWGEVNPSSTGVVHRMEDGDLCVSFCFLDRLWLCKAGELERIRPFRIGDRVKIKDGLVTPRWGWGMETHASKGHVVGVDANGKLRIKFLWREGRPWIGDPADIVLDETS 1624 HSP 2 Score: 101.679 bits (252), Expect = 4.460e-21 Identity = 47/125 (37.60%), Postives = 78/125 (62.40%), Query Frame = 1 Query: 22 ELQIGDWVRVRASVTTPTYQWGEVSHSSIGVVHRM-ESGELWVAFCFTERLWLCKAWEMERVRPFKVGDKVRIKEGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFQWREGRPWIGDPADIVL 393 + ++GDWVRV+ASV++P Y W +++ +SIGV+H + E G++ +AFCF + + C ++E+V PF VG ++ + + PR GW ET A+ G+V+ +D +G L + R+ W P D L Sbjct: 1115 DFKVGDWVRVKASVSSPKYGWEDITRNSIGVMHSLDEDGDVGIAFCFRSKPFSCSVTDVEKVTPFHVGQEIHMTPSITQPRLGWSNETPATIGKVMRIDMDGTLSAQVTGRQ-TLWRVSPGDAEL 1238 HSP 3 Score: 92.4337 bits (228), Expect = 2.706e-18 Identity = 47/125 (37.60%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 28 QIGDWVRVRASV-TTPTYQWGEVSHSSIGVVHRM-ESGELWVAFCFTERLWLCKAWEMERVRPFKVGDKVRIKEGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFQWREGRPWIGDPADIVLD 396 ++GDWVR + S+ P+Y W V SI VVH + E+G L +A CF + W ++E++ KVG V ++G+ PRWGW S+G + V A+G++R+ F G W GDPAD+ ++ Sbjct: 1243 EVGDWVRSKPSLGNRPSYDWSNVGRESIAVVHSIQETGYLELACCFRKGRWSTHYTDLEKIPALKVGQFVHFQKGITEPRWGWRAAKPDSRGIITTVHADGEVRVAFFGLPGL-WRGDPADLEVE 1366 HSP 4 Score: 90.1225 bits (222), Expect = 1.343e-17 Identity = 44/123 (35.77%), Postives = 73/123 (59.35%), Query Frame = 1 Query: 22 ELQIGDWVRVRASVTTPTYQWGEVSHSSIGVVHRME-SGELWVAFCFTERLWLCKAWEMERVRPFKVGDKVRIKEGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFQWREGRPWIGDPADI 387 E ++GDWVR+R ++T+ + +G V S+G+V+ + L V + W C+ E+E V PF++GD+V +K + PR+ WG ETH S G++ ++ +G L I+ R PW DP+D+ Sbjct: 989 EFKVGDWVRIRQNLTSAKHGFGSVVPGSMGIVYCVRPDSSLLVELSYLPNPWHCEPEEVEPVAPFRIGDRVCVKRSVAEPRYAWGGETHHSVGKISEIENDGLLIIEIPNRP-IPWQADPSDM 1110 HSP 5 Score: 80.1073 bits (196), Expect = 1.390e-14 Identity = 44/137 (32.12%), Postives = 71/137 (51.82%), Query Frame = 1 Query: 28 QIGDWVRVRASVTTPTYQWGEVSHSSIGVVHRME-SGELW-----VAFCFTERLWLCKAWEMERVRPFKVGDKVRIKEGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFQWREGRPWIGDPADIVLDECSSCRTG 420 ++G+WVR+R V+ W V S+GVVH + G+ W V+FC + W +E+ + VG K R+K + PR+GW +H S G + +DA+GKLRI + + W+ DP+++ E + G Sbjct: 1370 EVGEWVRLREGVSC----WKSVGPGSVGVVHGVGYEGDEWDGTTSVSFCGEQERWAGPTSHLEKAKKLVVGQKTRVKLAVKQPRFGWSGHSHGSVGTISAIDADGKLRI-YTPAGSKTWMLDPSEVETIEEEELKIG 1501 HSP 6 Score: 72.0182 bits (175), Expect = 3.785e-12 Identity = 40/121 (33.06%), Postives = 65/121 (53.72%), Query Frame = 1 Query: 28 QIGDWVRVRASVTTPTYQWGEVSHSSIGVVHR-MESGELWVAFCFTERLWLCKAWEMERVRPFKVGDKVRIKEGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFQWREGRPWIGDPADI 387 ++GDWV+ + +TTP + W S+G V +E ++ +AFC E L E+ ++ P G VR++ + PR+GW ++ S G V+ VD +G LR+ F R W DPA++ Sbjct: 867 EVGDWVKFKRGITTPLHGWQGAKPKSVGFVQTILEKEDMIIAFCSGEARVLAN--EVVKLIPLDRGQHVRLRADVKEPRFGWRGQSRDSVGTVLCVDEDGILRVGFP-GASRGWKADPAEM 984 HSP 7 Score: 69.3218 bits (168), Expect = 2.453e-11 Identity = 38/109 (34.86%), Postives = 60/109 (55.05%), Query Frame = 1 Query: 28 QIGDWVRVRASVTTPTYQWGEVSHSSIGVVHRMESGELWVAFCFTERL-WLCKAWEMERVRPFKVGDKVRIKEGLVTPRWGWGMETHASKGQVVGVDANGKLRIKFQWR 351 +IGD V V+ SV P Y WG +H S+G + +E+ L + + W +ME++ FKVGD VR+K + +P++GW T S G + +D +G + I F +R Sbjct: 1054 RIGDRVCVKRSVAEPRYAWGGETHHSVGKISEIENDGLLIIEIPNRPIPWQADPSDMEKIDDFKVGDWVRVKASVSSPKYGWEDITRNSIGVMHSLDEDGDVGIAFCFR 1162 The following BLAST results are available for this feature:
BLAST of CX292219 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CX292219 ID=CX292219; Name=CX292219; organism=Citrus clementina; type=EST; length=743bpback to top |