CX293833
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX293833 vs. ExPASy Swiss-Prot
Match: COB21_ARATH (Coatomer subunit beta'-1 OS=Arabidopsis thaliana GN=At1g79990 PE=2 SV=2) HSP 1 Score: 191.815 bits (486), Expect = 1.661e-48 Identity = 83/123 (67.48%), Postives = 105/123 (85.37%), Query Frame = 1 Query: 157 QKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 525 +++F Q+S+RVKSVD HPT+PW+LASLYSGT+CIWNY +QT KS VT+ PVR+AKF+AR+ W+V G+DD FIRV++YNTM +K FEAH DYIR +AVHPT P+VL++SDD LIKLWDWEK Sbjct: 8 KRKFAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQTMVKSFDVTELPVRSAKFIARKQWVVAGADDMFIRVYNYNTMDKIKVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
BLAST of CX293833 vs. ExPASy Swiss-Prot
Match: COB23_ARATH (Coatomer subunit beta'-3 OS=Arabidopsis thaliana GN=At3g15980 PE=2 SV=1) HSP 1 Score: 189.889 bits (481), Expect = 6.310e-48 Identity = 82/122 (67.21%), Postives = 104/122 (85.25%), Query Frame = 1 Query: 157 QKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWE 522 +++F Q+S+RVKSVD HPT+PW+LASLYSGTVCIWNY +QT KS +VT+ PVR+AKF+ R+ W+V G+DD +IRV++YNTM VK FEAH DYIR +AVHPT P+VL++SDD LIKLWDWE Sbjct: 8 KRKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWE 129
BLAST of CX293833 vs. ExPASy Swiss-Prot
Match: COB22_ARATH (Coatomer subunit beta'-2 OS=Arabidopsis thaliana GN=At1g52360 PE=2 SV=1) HSP 1 Score: 188.734 bits (478), Expect = 1.406e-47 Identity = 82/123 (66.67%), Postives = 104/123 (84.55%), Query Frame = 1 Query: 157 QKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 525 +++ Q+S+RVKSVD HPT+PW+LASLYSGT+CIWNY +Q KS +VT+ PVR+AKFVAR+ W+V G+DD +IRV++YNTM VK FEAH DYIR +AVHPT P+VL++SDD LIKLWDWEK Sbjct: 8 KRKLAQRSERVKSVDLHPTEPWILASLYSGTLCIWNYQTQVMAKSFEVTELPVRSAKFVARKQWVVAGADDMYIRVYNYNTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEK 130
BLAST of CX293833 vs. ExPASy Swiss-Prot
Match: COB22_ORYSJ (Coatomer subunit beta'-2 OS=Oryza sativa subsp. japonica GN=Os02g0209100 PE=2 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 4.090e-47 Identity = 82/123 (66.67%), Postives = 105/123 (85.37%), Query Frame = 1 Query: 157 QKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 525 +++ Q+S+RVKSVD HPT+PW+L+SLYSG+VCIWNY +QT KS +VT+ PVR++KF+AR+ WIV G+DD FIRV++YNTM VK FEAH DYIR +AVHPT PFVL++SDD LIKLWDW+K Sbjct: 8 KRKLAQRSERVKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSSKFIARKQWIVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLWDWDK 130
BLAST of CX293833 vs. ExPASy Swiss-Prot
Match: COB21_ORYSJ (Coatomer subunit beta'-1 OS=Oryza sativa subsp. japonica GN=Os06g0143900 PE=2 SV=1) HSP 1 Score: 186.808 bits (473), Expect = 5.342e-47 Identity = 80/123 (65.04%), Postives = 106/123 (86.18%), Query Frame = 1 Query: 157 QKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 525 +++F Q+S+RVKSVD HPT+PW+L+SLYSG+VCIW+Y SQT KS +V++ PVR+AKF++R+ W+V G+DD FIRV++YNTM VK FEAH DYIR +AVHPT P+VL++SDD LIKLWDW+K Sbjct: 8 KRKFAQRSERVKSVDLHPTEPWILSSLYSGSVCIWDYQSQTMVKSFEVSELPVRSAKFISRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDDMLIKLWDWDK 130
BLAST of CX293833 vs. ExPASy Swiss-Prot
Match: COB23_ORYSJ (Putative coatomer subunit beta'-3 OS=Oryza sativa subsp. japonica GN=Os02g0209000 PE=3 SV=2) HSP 1 Score: 183.726 bits (465), Expect = 4.522e-46 Identity = 79/123 (64.23%), Postives = 103/123 (83.74%), Query Frame = 1 Query: 157 QKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 525 +++ Q+S+R KSVD HPT+PW+L+SLYSG+VCIWNY +QT KS +VT+ PVR++KF+ R+ W+V G+DD FIRV++YNTM VK FEAH DYIR +AVHPT PFVL++SDD LIKLWDW+K Sbjct: 8 KRKLAQRSERAKSVDLHPTEPWILSSLYSGSVCIWNYQTQTMVKSFEVTELPVRSSKFITRKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTQPFVLSSSDDMLIKLWDWDK 130
BLAST of CX293833 vs. ExPASy Swiss-Prot
Match: COPB2_PONAB (Coatomer subunit beta' OS=Pongo abelii GN=COPB2 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.900e-44 Identity = 78/123 (63.41%), Postives = 101/123 (82.11%), Query Frame = 1 Query: 157 QKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 525 +++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD LIKLWDW+K Sbjct: 8 KRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 130
BLAST of CX293833 vs. ExPASy Swiss-Prot
Match: COPB2_MOUSE (Coatomer subunit beta' OS=Mus musculus GN=Copb2 PE=2 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 1.900e-44 Identity = 78/123 (63.41%), Postives = 101/123 (82.11%), Query Frame = 1 Query: 157 QKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 525 +++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD LIKLWDW+K Sbjct: 8 KRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 130
BLAST of CX293833 vs. ExPASy Swiss-Prot
Match: COPB2_MACFA (Coatomer subunit beta' OS=Macaca fascicularis GN=COPB2 PE=2 SV=1) HSP 1 Score: 178.333 bits (451), Expect = 1.900e-44 Identity = 78/123 (63.41%), Postives = 101/123 (82.11%), Query Frame = 1 Query: 157 QKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 525 +++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD LIKLWDW+K Sbjct: 8 KRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 130
BLAST of CX293833 vs. ExPASy Swiss-Prot
Match: COPB2_HUMAN (Coatomer subunit beta' OS=Homo sapiens GN=COPB2 PE=1 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 1.900e-44 Identity = 78/123 (63.41%), Postives = 101/123 (82.11%), Query Frame = 1 Query: 157 QKEFIQKSDRVKSVDFHPTQPWVLASLYSGTVCIWNYHSQTTEKSVKVTDSPVRTAKFVAREHWIVCGSDDKFIRVFDYNTMASVKEFEAHEDYIRSLAVHPTFPFVLTASDDKLIKLWDWEK 525 +++ +SDRVKSVD HPT+PW+LASLY+G+VC+WN+ +QT K+ +V D PVR AKFVAR++W+V G+DD IRVF+YNT+ V FEAH DYIR +AVHPT PF+LT+SDD LIKLWDW+K Sbjct: 8 KRKLTARSDRVKSVDLHPTEPWMLASLYNGSVCVWNHETQTLVKTFEVCDLPVRAAKFVARKNWVVTGADDMQIRVFNYNTLERVHMFEAHSDYIRCIAVHPTQPFILTSSDDMLIKLWDWDK 130 The following BLAST results are available for this feature:
BLAST of CX293833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 28
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Sequences
The
following sequences are available for this feature:
EST sequence >CX293833 ID=CX293833; Name=CX293833; organism=Citrus clementina; type=EST; length=525bpback to top |